- Aug 2022
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www.thelancet.com www.thelancet.com
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Karim, S. S. A., & Karim, Q. A. (2021). Omicron SARS-CoV-2 variant: A new chapter in the COVID-19 pandemic. The Lancet, 0(0). https://doi.org/10.1016/S0140-6736(21)02758-6
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www.nature.com www.nature.com
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Dolgin, E. (2021). Omicron is supercharging the COVID vaccine booster debate. Nature. https://doi.org/10.1038/d41586-021-03592-2
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www.bmj.com www.bmj.com
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Lauring, A. S., Tenforde, M. W., Chappell, J. D., Gaglani, M., Ginde, A. A., McNeal, T., Ghamande, S., Douin, D. J., Talbot, H. K., Casey, J. D., Mohr, N. M., Zepeski, A., Shapiro, N. I., Gibbs, K. W., Files, D. C., Hager, D. N., Shehu, A., Prekker, M. E., Erickson, H. L., … Self, W. H. (2022). Clinical severity of, and effectiveness of mRNA vaccines against, covid-19 from omicron, delta, and alpha SARS-CoV-2 variants in the United States: Prospective observational study. BMJ, 376, e069761. https://doi.org/10.1136/bmj-2021-069761
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www.bmj.com www.bmj.com
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Torjesen, I. (2021). Covid-19: Omicron may be more transmissible than other variants and partly resistant to existing vaccines, scientists fear. BMJ, 375, n2943. https://doi.org/10.1136/bmj.n2943
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twitter.com twitter.com
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Sandra Ciesek. (2021, December 8). Unsere ersten Daten zur Neutralisation von Omicron versus Delta sind fertig: 2x Biontech, 2x Moderna, 1xAZ/1x Biontech nach 6 Monaten 0% Neutralisation bei Omicron, auch 3x Biontech 3 Monate nach Booster nur 25% NT versus 95% bei Delta. Bis zu 37fache Reduktion Delta vs. Omicron https://t.co/w0gHww26sg [Tweet]. @CiesekSandra. https://twitter.com/CiesekSandra/status/1468465347519041539
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osf.io osf.io
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Smith, L., Potts, H., Amlôt, R., Fear, N. T., Michie, S., & Rubin, J. (2022). How has the emergence of the Omicron SARS-CoV-2 variant of concern influenced worry, perceived risk, and behaviour in the UK? A series of cross-sectional surveys. OSF Preprints. https://doi.org/10.31219/osf.io/rpcu2
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plus.tagesspiegel.de plus.tagesspiegel.de
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Karberg, S., & Friebe, R. (2022, January 18). Virologe Drosten im Interview: „Wie lange geht diese Quälerei noch weiter?“. https://plus.tagesspiegel.de/wissen/virologe-drosten-im-interview-wie-lange-geht-diese-qualerei-noch-weiter-361636.html
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www.nature.com www.nature.com
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Meng, B., Abdullahi, A., Ferreira, I. A. T. M., Goonawardane, N., Saito, A., Kimura, I., Yamasoba, D., Gerber, P. P., Fatihi, S., Rathore, S., Zepeda, S. K., Papa, G., Kemp, S. A., Ikeda, T., Toyoda, M., Tan, T. S., Kuramochi, J., Mitsunaga, S., Ueno, T., … Gupta, R. K. (2022). Altered TMPRSS2 usage by SARS-CoV-2 Omicron impacts tropism and fusogenicity. Nature, 1–1. https://doi.org/10.1038/s41586-022-04474-x
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www.washingtonpost.com www.washingtonpost.com
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Hamblin, J. (2021, December 9). Perspective | Omicron won’t keep us from ending the pandemic. We’re doing that ourselves. Washington Post. https://www.washingtonpost.com/outlook/2021/12/09/omicron-coronavirus-individual-threat/
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 14). RT @thehowie: "...The vaccine provided 70 percent protection in fully vaccinated individuals against severe complications that would requir… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1470749072160133128
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www.bbc.co.uk www.bbc.co.uk
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How are new Covid cases impacting sport? (n.d.). BBC Sport. Retrieved December 23, 2021, from https://www.bbc.com/sport/59682938
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 14). RT @thehowie: BREAKING South Africa: 82% increase in cases, week over week. 34.9% positive rate. Record 7-day average. Not near platea… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1470814593610047490
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twitter.com twitter.com
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Dr Nisreen Alwan 🌻. (2021, December 23). We’re in unchartered territory. Https://t.co/O1GGcXpMll [Tweet]. @Dr2NisreenAlwan. https://twitter.com/Dr2NisreenAlwan/status/1474051397570248716
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twitter.com twitter.com
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Kai Kupferschmidt. (2021, December 10). “the severity profile of Omicron cases must be interpreted along with an understanding of its capacity to re-infect (and infect the vaccinated)“ This is what I have been trying to explain the last few days. As usual @nataliexdean does it better (and in color)! [Tweet]. @kakape. https://twitter.com/kakape/status/1469270407995867139
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twitter.com twitter.com
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Yaniv Erlich. (2021, December 8). Updated table of Omicron neuts studies with @Pfizer results (which did the worst job in terms of reporting raw data). Strong discrepancy between studies with live vs pseudo. Https://t.co/InQuWMAm4l [Tweet]. @erlichya. https://twitter.com/erlichya/status/1468580675007795204
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 12). RT @ryan_landay: > A new diverse genome has appeared within the B.1.1.529 lineage that has all of the shared mutations of B.1.1.529, some o… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1470066521615605766
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 9). RT @RachelLavin: As Omicron reality dawns, consider investing in better masks: "....Tight-fitting FFP2 masks provide 75 times better pro… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1474030898551087113
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www.theguardian.com www.theguardian.com
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Campbell, D., Sabbagh, D., & Devlin, H. (2022, January 7). Military deployed at London hospitals due to Omicron staff shortages. The Guardian. https://www.theguardian.com/world/2022/jan/07/military-deployed-at-london-hospitals-due-to-omicron-staff-shortages
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twitter.com twitter.com
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ReconfigBehSci. (2021, November 26). RT @mvankerkhove: Following the meeting of the @WHO TAG-VE today, WHO classifies B.1.1.529 as a variant of concern named Omicron. We call… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1464302372100976650
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 12). RT @EricTopol: If you think Prior Covid protects against Omicron (B.1.1.529), think again https://medrxiv.org/content/10.1101/2021.12.08.21267491v1 and "Neutralizing antibo… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1470434736304803845
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twitter.com twitter.com
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ReconfigBehSci. (2021, November 26). vaccine equity has been a disaster, but I do wonder whether the exclusive focus on donations does the US/EU comparison justice. The EU allowed the export of huge numbers of EU produced doses at a time when the US did not (and EU itself was struggling to meet demand). [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1464255575416520749
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twitter.com twitter.com
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ReconfigBehSci on Twitter: “RT @BNODesk: BREAKING: U.S. reports 716,714 new coronavirus cases, setting world record for cases in one day” / Twitter. (n.d.). Retrieved January 7, 2022, from https://twitter.com/SciBeh/status/1478987541332348933
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Karan, A. (2022). We cannot afford to repeat these four pandemic mistakes. BMJ, 376, o631. https://doi.org/10.1136/bmj.o631
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 23). Risk of hospital stay 40% lower with Omicron than Delta, UK data suggests https://t.co/VupN8hY4qq [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1473916654421643266
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twitter.com twitter.com
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ReconfigBehSci. (2021, November 26). maybe this is a good moment to remind people that makers of mRNA vaccines have been extensively prepping for the possibility of new variants. Biontech/Pfizer have given a timeline of 100 days to the delivery of a retooled version of their vaccine [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1464225264523747359
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www.theatlantic.com www.theatlantic.com
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Kissane, E. (2021, December 23). We’re About to Lose Track of the Pandemic. The Atlantic. https://www.theatlantic.com/ideas/archive/2021/12/were-about-to-lose-track-of-the-pandemic/621097/
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 11). RT @MackayIM: Booster access brought forward to slow spread of Omicron COVID-19 variant https://t.co/PukbPydylw [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1469633384511119364
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twitter.com twitter.com
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Eric Topol. (2022, January 2). As the world turns.....vertical the Omicron signature (|) @OurWorldInData https://t.co/LOBiaiBapD [Tweet]. @EricTopol. https://twitter.com/EricTopol/status/1477433315896430592
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 13). RT @DrEricDing: 11) Omicron is doubling every 1.6 days in UK 🇬🇧 according to @DrWilliamKu’s figure. That’s way faster growth than in South… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1470451594378502154
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twitter.com twitter.com
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Prof. Christina Pagel. (2021, December 23). UKHSA surveillance report shows reinfections rising sharply as Omicron takes hold https://t.co/UGArY4sbOA [Tweet]. @chrischirp. https://twitter.com/chrischirp/status/1474041921249189896
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www.theguardian.com www.theguardian.com
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Thomas, T., & Duncan, P. (2021, December 23). If Omicron is the dominant variant in UK, why is the number of confirmed cases so low? The Guardian. https://www.theguardian.com/world/2021/dec/23/if-omicron-is-the-dominant-variant-in-uk-why-is-the-number-of-confirmed-cases-so-low
Tags
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Annotators
URL
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 13). Important update on the now withdrawn @BallouxFrancois tweet identifying hopeful turning of the corner in SA omicron data [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1470311016114364420
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 11). RT @DrEricDing: DOUBLING % in one day: The spike of probable #Omicron variant in Scotland🏴 has critically surged—Now at 13.3%, up fro… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1469596523222781954
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 8). RT @kallmemeg: NEW: @UKHSA Mini Omicron Update Omicron VOC-21NOV-01 (B.1.1.529) update on cases, S gene target failure and risk assessment… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1468673329494216726
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twitter.com twitter.com
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John Burn-Murdoch. (2021, November 25). Five quick tweets on the new variant B.1.1.529 Caveat first: Data here is very preliminary, so everything could change. Nonetheless, better safe than sorry. 1) Based on the data we have, this variant is out-competing others far faster than Beta and even Delta did 🚩🚩 https://t.co/R2Ac4e4N6s [Tweet]. @jburnmurdoch. https://twitter.com/jburnmurdoch/status/1463956686075580421
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www.cnn.com www.cnn.com
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CNN, I. K. (n.d.). Vaccine inequity and hesitancy made the Omicron variant more likely, scientists say. CNN. Retrieved December 23, 2021, from https://www.cnn.com/2021/11/28/world/omicron-coronavirus-variant-vaccine-inequity-intl-cmd/index.html
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 22). RT @chrischirp: Positivity rising steeply too—There are definitely many more people we aren’t catching https://t.co/4xDPwYQtrx [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1473695678610214927
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twitter.com twitter.com
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ReconfigBehSci on Twitter: “RT @chrischirp: As well as Tom’s new one (B.1.1.529), C.1.2 seems to be spreading in S Africa—C.1.2 was the one with lots of worrying mut…” / Twitter. (n.d.). Retrieved December 23, 2021, from https://twitter.com/SciBeh/status/1463597407082532864
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 16). RT @MadsAlbertsen85: #Omicron update from Denmark. Omicron cases on the 12th of December adjusted up to 20.5% (+2%). Omicron is now having… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1471516083819462670
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 11). RT @thehowie: BREAKING: Hospitalizations South Africa Hospitalizations⬆️67% week over week. Gauteng Province⬆️66%. GP⬆️1.6% from yesterd… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1469685234149072897
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ReconfigBehSci. (2021, December 9). a rather worrying development- a (local) newspaper “fact checking” the new German health minister simply by interviewing a virologist who happens to have a different view. There’s simply no established “fact” as to the severity of omicron in children at this point in time [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1469037817481334786
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twitter.com twitter.com
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Trevor Bedford. (2021, December 11). We find that logistic growth of Omicron sequence fraction looks similar between the UK, the US and Germany with roughly 1% of sequenced cases in all three countries being Omicron on Dec 1. 3/10 https://t.co/De0t2xreU9 [Tweet]. @trvrb. https://twitter.com/trvrb/status/1469784757261127685
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www.nature.com www.nature.com
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Gollub, R. L. (2022). Brain changes after COVID revealed by imaging. Nature. https://doi.org/10.1038/d41586-022-00503-x
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 17). RT @EricTopol: No evidence that Omicron is less severe, new @imperialcollege study reports https://ft.com/content/020534b3-5a54-4517-9fd1-167a5db50786 https://t.co/5YYzJ6tVtc [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1472156681098469380
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twitter.com twitter.com
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ReconfigBehSci. (2021, November 26). RT @HZiauddeen: 🧵 COVID-19 & B.1.1.529: A chance for govt & others to change their mind and their approach? While we are still gathering d… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1464200877888184324
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 22). RT @chrishendel: We need increased targeted measures now to slow the spread of #Omicron by @DrSarahHal via @bmj_latest https://t.co/3Tx… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1473987200509521925
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www.washingtonpost.com www.washingtonpost.com
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Perspective | Even the best-case scenario with omicron will still be bad. (n.d.). Washington Post. Retrieved December 23, 2021, from https://www.washingtonpost.com/outlook/2021/12/21/omicron-mild-cases-numbers/
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Covid: Dutch go into Christmas lockdown over Omicron wave. (2021, December 18). BBC News. https://www.bbc.com/news/world-europe-59713503
Tags
- Mark Rutte
- school
- europe
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Annotators
URL
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- Jun 2022
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www.frontiersin.org www.frontiersin.org
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whole-genome sequencing (WGS) provides the highest possible subtyping resolution improving the surveillance, outbreak investigation, source attribution, and microbial population studies
Purpose of WGS in population epidemiology
- Surveillance
- Outbreak Investigation
- Source attribution
- Microbial population
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- Apr 2022
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www.nytimes.com www.nytimes.com
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Times, T. N. Y. (2020, March 3). Coronavirus in the U.S.: Latest Map and Case Count. The New York Times. https://www.nytimes.com/interactive/2021/us/covid-cases.html
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www.covid-19-mobility.org www.covid-19-mobility.org
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Schlosser, F. (2021, November 29). Omicron—Import Risk. Covid-19 Mobility Project. https://www.covid-19-mobility.org/reports/importrisk_omicron/
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twitter.com twitter.com
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Kai Kupferschmidt. (2021, December 1). @DirkBrockmann That percentage number tells you “how likely an infected passenger from South Africa or Botswana travels to each country and exits the airport there”. So: “0.9% in Germany means that out of 1000 such individuals, 9 are expected to have Germany as their final destination.” [Tweet]. @kakape. https://twitter.com/kakape/status/1466107478807097354
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twitter.com twitter.com
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🇺🇦 Meaghan Kall. (2022, January 27). NEW: 🏴 Vaccine effectiveness (symptomatic infection) data for BA.2 {Omicron’s more infectious sister} NO difference in VE between Omicron (BA.1) and BA.2 Possibly even higher VE for BA.2 but estimates overlap See full thread 🧵 from @freja_kirsebom https://t.co/bJ7uCn2cGV [Tweet]. @kallmemeg. https://twitter.com/kallmemeg/status/1486821549458001927
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twitter.com twitter.com
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Dr Dominic Pimenta [@DrDomPimenta]. (2021, December 15). An illustration of communicating risk with “less severe” variants: [Thread] Assume Omicron is 4x more transmissible than Delta. [1] Assume Omicron leads to 1/3 less admissions than Delta. [Figure below] Assume 1 in 100 cases of Delta are admitted to hospital. Https://t.co/XtnVwoOrUo [Tweet]. Twitter. https://twitter.com/DrDomPimenta/status/1471094002808242177
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Pfizer and BioNTech Provide Update on Omicron Variant | Pfizer. (n.d.). Retrieved April 22, 2022, from https://www.pfizer.com/news/press-release/press-release-detail/pfizer-and-biontech-provide-update-omicron-variant
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www.theguardian.com www.theguardian.com
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The Guardian. ‘We Can Prevail over Omicron. We Just Need to Use the Tools We Have’, 1 December 2021, sec. Opinion. https://www.theguardian.com/commentisfree/2021/dec/01/we-can-prevail-over-omicron-use-tools-we-have.
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www.medrxiv.org www.medrxiv.org
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Pérez-Then, E., Lucas, C., Monteiro, V. S., Miric, M., Brache, V., Cochon, L., Vogels, C. B. F., Cruz, E. D. la, Jorge, A., Santos, M. D. los, Leon, P., Breban, M. I., Billig, K., Yildirim, I., Pearson, C., Downing, R., Gagnon, E., Muyombwe, A., Razeq, J., … Iwasaki, A. (2021). Immunogenicity of heterologous BNT162b2 booster in fully vaccinated individuals with CoronaVac against SARS-CoV-2 variants Delta and Omicron: The Dominican Republic Experience (p. 2021.12.27.21268459). medRxiv. https://doi.org/10.1101/2021.12.27.21268459
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twitter.com twitter.com
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Prof. Christina Pagel. (2021, December 29). Omicron was dominant everywhere in England by Christmas https://t.co/x58pJi7VcD [Tweet]. @chrischirp. https://twitter.com/chrischirp/status/1476161382852796419
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twitter.com twitter.com
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Pan-Hammarström lab. (2022, January 7). Our new study: Heterogeneous vaccination strategy with inactivated vaccine + mRNA booster elicits strong B and T cell response against the WT and VOC including Omicron @VirusesImmunity https://t.co/aBiN9anMBL [Tweet]. @panhammarstrom. https://twitter.com/panhammarstrom/status/1479449892410044419
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www.medrxiv.org www.medrxiv.org
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Abu-Raddad, L. J., Chemaitelly, H., Ayoub, H. H., AlMukdad, S., Tang, P., Hasan, M. R., Coyle, P., Yassine, H. M., Al-Khatib, H. A., Smatti, M. K., Al-Kanaani, Z., Al-Kuwari, E., Jeremijenko, A., Kaleeckal, A. H., Latif, A. N., Shaik, R. M., Abdul-Rahim, H. F., Nasrallah, G. K., Al-Kuwari, M. G., … Bertollini, R. (2022). Effectiveness of BNT162b2 and mRNA-1273 COVID-19 boosters against SARS-CoV-2 Omicron (B.1.1.529) infection in Qatar (p. 2022.01.18.22269452). medRxiv. https://doi.org/10.1101/2022.01.18.22269452
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twitter.com twitter.com
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BNO/Medriva Newsroom [@medriva]. (2021, November 26). South Africa’s health minister says, based on a small sample of Omicron cases, the majority of hospital patients are unvaccinated: ‘It indicates that the vaccines are providing protection’ [Tweet]. Twitter. https://twitter.com/medriva/status/1464327805836083201
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www.theguardian.com www.theguardian.com
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Sample, I., & Walker, P. (2021, December 7). Scientists find ‘stealth’ version of Omicron that may be harder to track. The Guardian. https://www.theguardian.com/world/2021/dec/07/scientists-find-stealth-version-of-omicron-not-identifiable-with-pcr-test-covid-variant
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- Mar 2022
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twitter.com twitter.com
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ReconfigBehSci. (2022, February 27). RT @theosanderson: BA.1 and BA.2 prevalence by region from ONS Community Infection survey https://t.co/BkBFpP9O48 [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1498205787948294145
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twitter.com twitter.com
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ReconfigBehSci. (2022, January 1). RT @wanderer_jasnah: Quick glance at B.1.640.2 before anyone asks me about it: It’s basically B.1.1.7 w/a large Spike NTD deletion. I see… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1478289563776962563
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twitter.com twitter.com
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ReconfigBehSci. (2022, January 5). RT @thehowie: "...Rapid antigen tests may not be as fit-for-purpose in routine workplace screening to prevent asymptomatic spread of Omicro… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1478796550004486151
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www.timesofisrael.com www.timesofisrael.com
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Israel said delaying rollout of 4th COVID shots amid signs Omicron less severe | The Times of Israel. (n.d.). Retrieved 29 March 2022, from https://www.timesofisrael.com/israel-said-to-delay-rollout-of-4th-covid-shots-amid-signs-omicron-less-severe/amp/
Tags
- case
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Annotators
URL
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 5). RT @AnnaAlbecka: I guess Omicron is not going anywhere with already >5% of sequences in Belgium and Netherlands #Omicron https://t.co/b2Xs7… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1467821013941510145
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hackmd.io hackmd.io
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Myths about COVID-19 vaccination. (n.d.). HackMD. Retrieved March 23, 2022, from https://hackmd.io/@scibehC19vax/misinfo_myths
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www.cidrap.umn.edu www.cidrap.umn.edu
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Mar 03, M. V. B. | N. W. | C. N. | & 2022. (n.d.). Third vaccine dose boosts Omicron protection, with some waning. CIDRAP. Retrieved 7 March 2022, from https://www.cidrap.umn.edu/news-perspective/2022/03/third-vaccine-dose-boosts-omicron-protection-some-waning
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www.thehindu.com www.thehindu.com
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BA.2 sub-lineage has even higher propensity to spread among people and has the ability to infect people who have been fully vaccinated and/or previously infected by escaping from neutralising antibodies induced by vaccination or infection.
Omicron BA2 infects more in vaccinated
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- Feb 2022
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twitter.com twitter.com
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Marc Stegger. (2022, February 22). New preprint on #COVID19 is out: “Occurrence and significance of Omicron BA.1 infection followed by BA.2 reinfection”. Using the national surveillance system in Denmark, we show that reinfections with #SARSCoV2 VOC #Omicron BA.2 can occur after recent BA.1 infection #SSI_dk https://t.co/Cm0n8vga4P [Tweet]. @MarcStegger. https://twitter.com/MarcStegger/status/1496099303143653379
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www.medrxiv.org www.medrxiv.org
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Stegger, M., Edslev, S. M., Sieber, R. N., Ingham, A. C., Ng, K. L., Tang, M.-H. E., Alexandersen, S., Fonager, J., Legarth, R., Utko, M., Wilkowski, B., Gunalan, V., Bennedbæk, M., Byberg-Grauholm, J., Møller, C. H., Christiansen, L. E., Svarrer, C. W., Ellegaard, K., Baig, S., … Rasmussen, M. (2022). Occurrence and significance of Omicron BA.1 infection followed by BA.2 reinfection (p. 2022.02.19.22271112). medRxiv. https://doi.org/10.1101/2022.02.19.22271112
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www.nature.com www.nature.com
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Tseng, H. F., Ackerson, B. K., Luo, Y., Sy, L. S., Talarico, C. A., Tian, Y., Bruxvoort, K. J., Tubert, J. E., Florea, A., Ku, J. H., Lee, G. S., Choi, S. K., Takhar, H. S., Aragones, M., & Qian, L. (2022). Effectiveness of mRNA-1273 against SARS-CoV-2 Omicron and Delta variants. Nature Medicine, 1–1. https://doi.org/10.1038/s41591-022-01753-y
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twitter.com twitter.com
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Cornelius Roemer. (2022, February 12). Fantastic work by @UKHSA comparing serial intervals of BA.1, BA.2 and Delta as published in the most recent technical briefing. BA.2 seems to have even shorter serial interval than BA.1 This could help explain different relative growth rates of BA.2 vs BA.1 in different countries https://t.co/Gch94Ew8CX [Tweet]. @CorneliusRoemer. https://twitter.com/CorneliusRoemer/status/1492434232664375304
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www.nejm.org www.nejm.org
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Altarawneh, H. N., Chemaitelly, H., Hasan, M. R., Ayoub, H. H., Qassim, S., AlMukdad, S., Coyle, P., Yassine, H. M., Al-Khatib, H. A., Benslimane, F. M., Al-Kanaani, Z., Al-Kuwari, E., Jeremijenko, A., Kaleeckal, A. H., Latif, A. N., Shaik, R. M., Abdul-Rahim, H. F., Nasrallah, G. K., Al-Kuwari, M. G., … Abu-Raddad, L. J. (2022). Protection against the Omicron Variant from Previous SARS-CoV-2 Infection. New England Journal of Medicine, 0(0), null. https://doi.org/10.1056/NEJMc2200133
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Dr. Peter Hotez: Omicron is like a fast-moving freight train. (n.d.). MSN. Retrieved February 20, 2022, from https://www.msn.com/en-us/news/us/dr-peter-hotez-omicron-is-like-a-fast-moving-freight-train/vi-AARPfVG
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www.nationalgeographic.com www.nationalgeographic.com
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Mckeever, A. (n.d.). COVID-19 variants will keep coming until everyone can access vaccines. Retrieved February 20, 2022, from https://www.nationalgeographic.com/science/article/covid-19-variants-will-keep-coming-until-everyone-can-access-vaccines
Tags
- Omicron
- South Africa
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Annotators
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twitter.com twitter.com
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Eric Feigl-Ding. (2022, January 13). WATCH📺—Despite 97.5% of all adults in England🏴 with antibodies to #COVID19 (via vax/infection)–hospitalizations still surging. Why? Because variants like #Omicron are adapting. Need multivalent vax, plus ➡️N95 & ventilation are agnostic to variants—Key! Https://t.co/gDNRJIWojX [Tweet]. @DrEricDing. https://twitter.com/DrEricDing/status/1481732793482813443
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twitter.com twitter.com
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Ali Ellebedy. (2021, December 30). We need those who are adept at #SciComm to explain that “Omicron” is sufficiently different from the original strain that was used to make the vaccine. Therefore, the definition of “fully vaccinated” will have to be updated, but that does not mean that the vaccines have failed. [Tweet]. @TheBcellArtist. https://twitter.com/TheBcellArtist/status/1476649138691444740
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www.mercurynews.com www.mercurynews.com
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Living with COVID-19: How the virus could turn into the common cold, or something far worse. (2022, January 9). The Mercury News. https://www.mercurynews.com/2022/01/09/living-with-covid-19-how-the-virus-could-turn-into-the-common-cold-or-something-far-worse
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twitter.com twitter.com
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ReconfigBehSci on Twitter: ‘RT @HelenBranswell: The latest “Nowcast” from @CDCgov suggests Omicron has pretty much swept the table. Https://t.co/BAwPhsyPwW https://t.…’ / Twitter. (n.d.). Retrieved 13 February 2022, from https://twitter.com/SciBeh/status/1483495777376903175
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twitter.com twitter.com
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Anthony J Leonardi, PhD, MS. (2022, January 22). Wow. This is concerning. H/t @ForesightWisdom it is learning to become more chronic. Https://t.co/XwFR4D0kiy [Tweet]. @fitterhappierAJ. https://twitter.com/fitterhappierAJ/status/1484996537889476610
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twitter.com twitter.com
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World Health Organization (WHO) on Twitter. (n.d.). Twitter. Retrieved 13 February 2022, from https://twitter.com/WHO/status/1485554889900142599
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www.youtube.com www.youtube.com
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American Medical Association (AMA). (2021, December 6). Peter Hotez, MD, PhD, on the omicron variant and Delta winter surge | COVID-19 Update for Dec. 6, 20. https://www.youtube.com/watch?v=WnfpC1_N2Mg
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blogs.bmj.com blogs.bmj.com
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Pak, C. (2022, February 8). Endemic Fatalism and Why It Won’t Resolve COVID-19. Medical Humanities. https://blogs.bmj.com/medical-humanities/?p=3280
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twitter.com twitter.com
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Tulio de Oliveira. (2022, February 9). As expected, Omicron BA.2 takes over in South Africa, close to 100% of the new genomes. What does it mean? Https://t.co/SAb9mGYSjN [Tweet]. @Tuliodna. https://twitter.com/Tuliodna/status/1491483399265075202
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www.thelancet.com www.thelancet.com
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Wong, S.-C., Au, A. K.-W., Chen, H., Yuen, L. L.-H., Li, X., Lung, D. C., Chu, A. W.-H., Ip, J. D., Chan, W.-M., Tsoi, H.-W., To, K. K.-W., Yuen, K.-Y., & Cheng, V. C.-C. (2022). Transmission of Omicron (B.1.1.529) - SARS-CoV-2 Variant of Concern in a designated quarantine hotel for travelers: A challenge of elimination strategy of COVID-19. The Lancet Regional Health – Western Pacific, 18. https://doi.org/10.1016/j.lanwpc.2021.100360
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twitter.com twitter.com
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PaedsHaemDoc. (2022, January 9). Had the misfortune (via @fatemperor) to come across Dr Paul Alexander -apparently credentialed yet in single blog post demonstrates perfectly either a disconnect from rational thought or deliberate misinformation spreading of the #masspsychosis of the anti-Vax crew let’s examine https://t.co/Ctd49cb1qK [Tweet]. @dr_barrett. https://twitter.com/dr_barrett/status/1479986071832248322
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Jorge A. Caballero, MD (jorgecaballero.eth). (2022, January 10). 🧵/ I just spoke with two journalists about data that shows how the U.S. healthcare system is collapsing before our eyes. The million dollar question during both interviews was, “What else could we be doing right now?” The answer: Flatten the hospitalization curve. Now. [Tweet]. @DataDrivenMD. https://twitter.com/DataDrivenMD/status/1480607009867132928
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twitter.com twitter.com
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Yaneer Bar-Yam on Twitter. (n.d.). Twitter. Retrieved February 7, 2022, from https://twitter.com/yaneerbaryam/status/1474091037861761026
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twitter.com twitter.com
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Ulrich Elling. (2022, January 12). While #Omicron BA.1 leads the race, the little sister BA.2 is catching up in numbers. They are rather different with likely functional implications. BA.2 might be more immune evasive in RBD, less in NTD. And due to reduced mutation load in NTD maybe different fusion properties? Https://t.co/kEACjzQDs3 [Tweet]. @EllingUlrich. https://twitter.com/EllingUlrich/status/1481214901997682692
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twitter.com twitter.com
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Mike Honey 💉💉💉. (2022, January 27). Here’s the latest variant picture for Australia. BA.1 (Omicron) is still very dominant. The new sub-lineage BA.1.1 (with the Spike R346K mutation) is significant, but not growing rapidly. Https://t.co/LsOCkUQhai [Tweet]. @Mike_Honey_. https://twitter.com/Mike_Honey_/status/1486654152939765766
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Barnes, O., & Alabi, L. O. (2022, January 27). UK coronavirus cases tick up 10%, symptom tracker app shows. Financial Times. https://www.ft.com/content/f9833324-7986-48c4-a96c-153049ed9b5a
Tags
- effectiveness
- COVID-19
- data
- Denmark
- children
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Annotators
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twitter.com twitter.com
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Jonathan Li on Twitter: “There’s a lineage of Omicron that’s gained the R346K mutation (BA.1.1). This one could spell some trouble for the AZ mAb (tixagevimab/cilgavimab, Evusheld) that’s being used for pre-exposure prophylaxis. If you want to learn about tix/cil vs Omicron, read on 1/7” / Twitter. (n.d.). Retrieved February 6, 2022, from https://twitter.com/DrJLi/status/1487479972293853188
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twitter.com twitter.com
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Prof. Christina Pagel. (2022, January 31). Update on growth of Omicron subvariant BA.2 in England from Wellcome Sanger data. Growing in all regions. The main Omicron variant we’ve had so far is BA.1. There is then its child BA.1.1 with an extra mutation and its brother BA.2 which is pretty different to BA.1. 1/2 https://t.co/iVxrf01P4o [Tweet]. @chrischirp. https://twitter.com/chrischirp/status/1488127760291799041
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www.nature.com www.nature.com
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Mallapaty, Smriti. ‘Where Did Omicron Come from? Three Key Theories’. Nature 602, no. 7895 (28 January 2022): 26–28. https://doi.org/10.1038/d41586-022-00215-2.
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www.theguardian.com www.theguardian.com
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Berger, Eric. ‘As Omicron Peaks, the US Healthcare System Is Left “Broken beyond Repair”’. The Guardian, 4 February 2022, sec. Society. https://www.theguardian.com/society/2022/feb/03/us-coronavirus-healthcare-system-providers.
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www.statnews.com www.statnews.com
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Omicron’s sister variant spreads faster. So why did the one we call Omicron hit first? (2022, February 2). STAT. https://www.statnews.com/2022/02/02/omicron-sister-variant-ba2-spreads-faster/
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news.sky.com news.sky.com
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COVID: Reinfection risk from Omicron 16 times higher than Delta, ONS data indicates. (n.d.). Sky News. Retrieved February 4, 2022, from https://news.sky.com/story/reinfection-risk-from-omicron-16-times-higher-than-delta-ons-data-indicates-12519881
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twitter.com twitter.com
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Prof. Christina Pagel. (2022, January 26). here is BA.2 growth in Denmark. Https://t.co/stake8vHvq [Tweet]. @chrischirp. https://twitter.com/chrischirp/status/1486300603735330816
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www.nature.com www.nature.com
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Adam, D. (2022). Will Omicron end the pandemic? Here’s what experts say. Nature, 602(7895), 20–21. https://doi.org/10.1038/d41586-022-00210-7
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Tayag, Y. (2022, January 31). What causes long Covid? Scientists are zeroing in on the answer. Vox. https://www.vox.com/22906853/omicron-long-covid-vaccinated-symptoms-cause
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- Jan 2022
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www.deseret.com www.deseret.com
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Scribner, H. (2022, January 29). A new COVID-19 variant surge ‘will happen again,’ experts say. Deseret News. https://www.deseret.com/coronavirus/2022/1/29/22904290/new-covid-19-variant-surge-next-major-coronavirus-mutation
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twitter.com twitter.com
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Tom Wenseleers. (2022, January 30). Seems that the second Omicron subvariant BA.2 may soon be about to cause cases to start rising again in South Africa... Or at least to stop the decline in new infections. Shows how fast immunity wanes & evolution can catch up. Https://t.co/3y4xqPgZ0L [Tweet]. @TWenseleers. https://twitter.com/TWenseleers/status/1487919837670219781
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www.nejm.org www.nejm.org
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Pajon, R., Doria-Rose, N. A., Shen, X., Schmidt, S. D., O’Dell, S., McDanal, C., Feng, W., Tong, J., Eaton, A., Maglinao, M., Tang, H., Manning, K. E., Edara, V.-V., Lai, L., Ellis, M., Moore, K. M., Floyd, K., Foster, S. L., Posavad, C. M., … Montefiori, D. C. (2022). SARS-CoV-2 Omicron Variant Neutralization after mRNA-1273 Booster Vaccination. New England Journal of Medicine, 0(0), null. https://doi.org/10.1056/NEJMc2119912
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www.statnews.com www.statnews.com
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Early data indicate vaccines still protect against Omicron’s sister variant, BA.2. (2022, January 28). STAT. https://www.statnews.com/2022/01/28/early-data-indicate-vaccines-still-protect-against-omicrons-sister-variant-ba-2/
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spiral.imperial.ac.uk spiral.imperial.ac.uk
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Elliott, P., Eales, O., Bodinier, B., Tang, D., Wang, H., Jonnerby, J., Haw, D., Elliott, J., Whitaker, M., Walters, C., Atchison, C., Diggle, P., Page, A., Trotter, A., Ashby, D., Barclay, W., Taylor, G., Ward, H., Darzi, A., … Donnelly, C. (2022). Post-peak dynamics of a national Omicron SARS-CoV-2 epidemic during January 2022 [Working Paper]. http://spiral.imperial.ac.uk/handle/10044/1/93887
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Kozlov, M. (2022). How does Omicron spread so fast? A high viral load isn’t the answer. Nature. https://doi.org/10.1038/d41586-022-00129-z
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“Endemic” Covid? The pandemic will only be over when the world is jabbed. (2022, January 15). Inews.Co.Uk. https://inews.co.uk/news/politics/endemic-covid-the-pandemic-will-only-be-over-when-the-world-is-jabbed-1402691
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healthpolicy-watch.news healthpolicy-watch.news
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Backed By Science: Here’s How We Can Eliminate COVID-19 - Health Policy Watch. (2022, January 23). https://healthpolicy-watch.news/93258-2/
Tags
- strategy
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- temporary immune response
- attitudes
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Annotators
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twitter.com twitter.com
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Mrigank Shail, MD. (2022, January 11). Update on Omicron by Dr @mvankerkhove from @WHO’s Q&A https://t.co/NqCOvs59Tl [Tweet]. @mrigankshail. https://twitter.com/mrigankshail/status/1481006646826577925
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www.theguardian.com www.theguardian.com
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Davis, N., & correspondent, N. D. S. (2022, January 21). Covid reinfection: How likely are you to catch virus multiple times? The Guardian. https://www.theguardian.com/world/2022/jan/21/covid-reinfection-how-likely-are-you-to-catch-virus-multiple-times
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twitter.com twitter.com
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Tom Peacock. (2022, January 19). As its been getting increasing attention recently, I’m going to write a short thread on what we currently know about BA.2. -What is BA.2? -What is BA.2 doing currently? -Should we be concerned about it? [Tweet]. @PeacockFlu. https://twitter.com/PeacockFlu/status/1483768659420094464
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www.nbcnews.com www.nbcnews.com
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Edwards, E. (n.d.). Nearly 1 million pediatric Covid cases reported last week. Retrieved January 21, 2022, from https://www.nbcnews.com/health/health-news/nearly-1-million-pediatric-covid-cases-reported-last-week-rcna12631
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www.lifehacker.com.au www.lifehacker.com.au
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How Long Are You Actually Immune for After Recovering From COVID-19? (2022, January 19). Lifehacker Australia. https://www.lifehacker.com.au/2022/01/covid-19-immunity-explained/
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www.theguardian.com www.theguardian.com
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Halliday, J., & correspondent, J. H. N. of E. (2022, January 17). ‘Christmas was awful’: On the Omicron frontline at the Royal Preston hospital. The Guardian. https://www.theguardian.com/world/2022/jan/17/christmas-was-awful-on-the-omicron-frontline-at-the-royal-preston-hospital
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www.statnews.com www.statnews.com
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Scientists try to pinpoint why rapid Covid tests are missing some cases. (2022, January 6). STAT. https://www.statnews.com/2022/01/06/scientists-try-to-pinpoint-why-rapid-covid-tests-are-missing-cases/
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Kirby, J. (2021, December 23). Omicron collides with a struggling global vaccination campaign. Vox. https://www.vox.com/22846774/omicron-global-vaccines-covronavirus-covid-19
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www.med.hku.hk www.med.hku.hk
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HKUMed finds Omicron SARS-CoV-2 can infect faster and better than Delta in human bronchus but with less severe infection in lung. (n.d.). Retrieved January 16, 2022, from https://www.med.hku.hk/en/news/press/20211215-omicron-sars-cov-2-infection?utm_medium=social&utm_source=twitter&utm_campaign=press_release
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thedenmarkpost.com thedenmarkpost.com
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TheDenmarkPost. (2022, January 1). Corona In Denmark: Where Omikron’s Wall Is Already There | News Headlines Denmark | The Denmark Post. https://thedenmarkpost.com/corona-in-denmark-where-omikrons-wall-is-already-there-news-headlines-denmark/
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www.theatlantic.com www.theatlantic.com
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Yong, E. (2021, December 16). America Is Not Ready for Omicron. The Atlantic. https://www.theatlantic.com/health/archive/2021/12/america-omicron-variant-surge-booster/621027/
Tags
- individualism
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Annotators
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twitter.com twitter.com
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Tom Peacock. (2022, January 3). Lots of chat about B.1.640.2 in the last few days—Just a few points to keep in mind: - B.1.640.2 actually predates Omicron—In all that time there are exactly... 20 sequences (compared to the >120k Omis in less time) Def not one worth worrying about too much at the mo... [Tweet]. @PeacockFlu. https://twitter.com/PeacockFlu/status/1478118173903839237
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www.msn.com www.msn.com
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Covid’s evolution: ‘With each passing wave, we’ve seen greater transmissibility.’ (n.d.). MSN. Retrieved January 15, 2022, from https://www.msn.com/en-us/news/us/covid-s-evolution-with-each-passing-wave-we-ve-seen-greater-transmissibility/vi-AARYwCn
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twitter.com twitter.com
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Natalie E. Dean, PhD. (2022, January 2). Interesting. From this afternoon in @nytimes: Https://nytimes.com/2022/01/01/us/omicron-covid-holidays-surge-testing.html https://t.co/qCCkjXKS2K [Tweet]. @nataliexdean. https://twitter.com/nataliexdean/status/1477487783992254464
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www.theguardian.com www.theguardian.com
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Devlin, H., Davis, N., & correspondents, N. D. S. (2022, January 14). Expect another Omicron wave in early summer, Sage says. The Guardian. https://www.theguardian.com/world/2022/jan/14/expect-another-covid-omicron-wave-in-early-summer-sage-says
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www.reuters.com www.reuters.com
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O’donnell, C., & Aboulenein, A. (2021, December 30). COVID-19 hospitalization surge among U.S. children spurs new Omicron concerns. Reuters. https://www.reuters.com/world/us/covid-19-hospitalization-surge-among-us-children-spurs-new-omicron-concerns-2021-12-30/
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twitter.com twitter.com
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Helen Branswell. (2022, January 11). 1. #Omicron’s takeover was stunningly rapid and is now nearly complete, at least in the U.S. The latest “Nowcast” from @CDCgov (which uses recent data to model what’s happen now) suggests most of what is circulating here now is omicron. Https://t.co/6w3e8Ut5NW [Tweet]. @HelenBranswell. https://twitter.com/HelenBranswell/status/1480970453313277954
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twitter.com twitter.com
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Brian Wasik. (2022, January 13). A week later and NY State data still showing an extremely high hospitalization VE in the face of Omicron. Https://t.co/6tWPqyamoZ [Tweet]. @BrianRWasik. https://twitter.com/BrianRWasik/status/1481697336019537921
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www.niid.go.jp www.niid.go.jp
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Active epidemiological investigation on SARS-CoV-2 infection caused by Omicron variant (Pango lineage B.1.1.529) in Japan: Preliminary report on infectious period. (n.d.). Retrieved January 14, 2022, from https://www.niid.go.jp/niid/en/2019-ncov-e/10884-covid19-66-en.html
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Dolgin, E. (2022). Omicron thwarts some of the world’s most-used COVID vaccines. Nature. https://doi.org/10.1038/d41586-022-00079-6
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www.medrxiv.org www.medrxiv.org
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Zuo, F., Abolhassani, H., Du, L., Piralla, A., Bertoglio, F., Campos-Mata, L. de, Wan, H., Schubert, M., Wang, Y., Sun, R., Cassaniti, I., Vlachiotis, S., Kumagai-Braesch, M., Andréll, J., Zhang, Z., Xue, Y., Wenzel, E. V., Calzolai, L., Varani, L., … Pan-Hammarström, Q. (2022). Heterologous immunization with inactivated vaccine followed by mRNA booster elicits strong humoral and cellular immune responses against the SARS-CoV-2 Omicron variant (p. 2022.01.04.22268755). https://doi.org/10.1101/2022.01.04.22268755
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www.nbcnewyork.com www.nbcnewyork.com
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•. (n.d.). NYC ER Doc Breaks Down How Omicron Affects the Boosted, Vaxxed and Unvaccinated. NBC New York. Retrieved January 13, 2022, from https://www.nbcnewyork.com/news/coronavirus/nyc-er-doc-breaks-down-how-omicron-affects-the-boosted-vaxxed-and-unvaccinated/3468742/
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www.theguardian.com www.theguardian.com
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Geddes, L., & correspondent, L. G. S. (2022, January 11). Will Covid-19 become less dangerous as it evolves? The Guardian. https://www.theguardian.com/world/2022/jan/11/will-covid-19-become-less-dangerous-as-it-evolves
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twitter.com twitter.com
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Prof. Christina Pagel. (2022, January 10). I agree with pretty much all of this @FT article https://ft.com/content/e200156f-2e5a-4165-8aa2-28c24fe3c036 https://t.co/zhqPpqdyn7 [Tweet]. @chrischirp. https://twitter.com/chrischirp/status/1480568139947692041
Tags
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- mask wearing
- remote working
- Omicron
- government
- transmission
- staff shortage
- contact tracing
- is:tweet
- political leadership
- COVID-19
- lockdown
- data
- testing
- hospitalization
- vaccine
- England
- prevention
- hospital
- variant
- isolation
- NHS
- daily cases
- UK
- lang:en
Annotators
URL
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leger360.com leger360.com
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The Spread of the Omicron Variant and Vaccine Effectiveness—January 11, 2022. (2022, January 11). Leger. https://leger360.com/surveys/legers-north-american-tracker-january-11-2022/
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www.washingtonpost.com www.washingtonpost.com
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U.S. breaks record with more than 145,000 covid-19 hospitalizations. (n.d.). Washington Post. Retrieved January 12, 2022, from https://www.washingtonpost.com/health/2022/01/10/covid-hospitalized-omicron/
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www.imperial.ac.uk www.imperial.ac.uk
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Omicron largely evades immunity from past infection or two vaccine doses | Imperial News | Imperial College London. (n.d.). Imperial News. Retrieved January 12, 2022, from https://www.imperial.ac.uk/news/232698/omicron-largely-evades-immunity-from-past/
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www.medrxiv.org www.medrxiv.org
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Tseng, H. F., Ackerson, B. K., Luo, Y., Sy, L. S., Talarico, C., Tian, Y., Bruxvoort, K., Tupert, J. E., Florea, A., Ku, J. H., Lee, G. S., Choi, S. K., Takhar, H. S., Aragones, M., & Qian, L. (2022). Effectiveness of mRNA-1273 against SARS-CoV-2 omicron and delta variants (p. 2022.01.07.22268919). https://doi.org/10.1101/2022.01.07.22268919
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www.nature.com www.nature.com
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Sidik, S. M. (2022). Immunity against Omicron from breakthrough infection could be a matter of timing. Nature. https://doi.org/10.1038/d41586-022-00004-x
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www.theguardian.com www.theguardian.com
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Augustin, E. (2022, January 5). Cuba’s vaccine success story sails past mark set by rich world’s Covid efforts. The Guardian. https://www.theguardian.com/world/2022/jan/05/cuba-coronavirus-covid-vaccines-success-story
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twitter.com twitter.com
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ReconfigBehSci on Twitter: ‘RT @VictimOfMaths: But looking at the wider UK context, Derry is currently looking at 4.5% of everyone in the entire county testing posit…’ / Twitter. (n.d.). Retrieved 7 January 2022, from https://twitter.com/SciBeh/status/1479140302493466627
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www.newscientist.com www.newscientist.com
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author.fullName}. (n.d.). 2022 preview: What will the coronavirus do next? New Scientist. Retrieved January 4, 2022, from https://www.newscientist.com/article/mg25233661-800-2022-preview-what-will-the-coronavirus-do-next/
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inews.co.uk inews.co.uk
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Omicron peak could be “long and drawn out”, Sage scientists warn as pressure mounts on NHS. (2022, January 3). Inews.Co.Uk. https://inews.co.uk/news/politics/omicron-covid-variant-uk-peak-long-drawn-out-sage-scientists-warning-nhs-1380110
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www.webmd.com www.webmd.com
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Crist, C. (n.d.). First Omicron Death in U.S. Was Reinfection. WebMD. Retrieved January 4, 2022, from https://www.webmd.com/lung/news/20211224/first-omicron-death-in-u-s-was-reinfection
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www.nature.com www.nature.com
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Carreño, J. M., Alshammary, H., Tcheou, J., Singh, G., Raskin, A., Kawabata, H., Sominsky, L., Clark, J., Adelsberg, D. C., Bielak, D., Gonzalez-Reiche, A. S., Dambrauskas, N., Vigdorovich, V., Group, P. S., Srivastava, K., Sather, D. N., Sordillo, E. M., Bajic, G., van Bakel, H., … Krammer, F. (2021). Activity of convalescent and vaccine serum against SARS-CoV-2 Omicron. Nature. https://doi.org/10.1038/d41586-021-03846-z
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www.theguardian.com www.theguardian.com
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Davis, N., & correspondent, N. D. S. (2021, December 31). What do we know about the Omicron Covid variant so far? The Guardian. https://www.theguardian.com/world/2021/dec/31/what-do-we-know-about-the-omicron-covid-variant-so-far
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www.medrxiv.org www.medrxiv.org
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Keeling, M. J., Brooks-Pollock, E., Challen, R. J., Danon, L., Dyson, L., Gog, J. R., Guzman-Rincon, L., Hill, E. M., Pellis, L. M., Read, J. M., & Tildesley, M. (2021). Short-term Projections based on Early Omicron Variant Dynamics in England. (p. 2021.12.30.21268307). https://doi.org/10.1101/2021.12.30.21268307
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- Dec 2021
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psyarxiv.com psyarxiv.com
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WIlliams, S. N., & Dienes, K. (2021). ‘Variant fatigue’? Public attitudes to COVID-19 18 months into the pandemic: A qualitative study. PsyArXiv. https://doi.org/10.31234/osf.io/vam4t
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www.washingtonpost.com www.washingtonpost.com
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Omicron and children: Pediatric hospitals in parts of U.S. filling fast. (n.d.). Washington Post. Retrieved December 28, 2021, from https://www.washingtonpost.com/health/2021/12/24/omicron-children-hospitalizations-us/
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www.theguardian.com www.theguardian.com
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Murray, J. (2021, December 28). Omicron is ‘not the same disease’ as earlier Covid waves, says UK scientist. The Guardian. https://www.theguardian.com/world/2021/dec/28/omicron-is-not-the-same-disease-as-earlier-covid-waves-says-uk-scientist
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Genome sequencing is complex, and only 38 laboratories across the country (https://bit.ly/3ED4vrP) have the ability to sequence a virus which is as infectious as this
Viral Genome sequencing facility in India
- 38 labs
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www.imperial.ac.uk www.imperial.ac.uk
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Omicron largely evades immunity from past infection or two vaccine doses | Imperial News | Imperial College London. (n.d.). Imperial News. Retrieved December 21, 2021, from https://www.imperial.ac.uk/news/232698/modelling-suggests-rapid-spread-omicron-england/
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www.theguardian.com www.theguardian.com
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Press, A. (2021, December 18). Court rules Biden’s vaccine mandate for large employers can take effect. The Guardian. https://www.theguardian.com/us-news/2021/dec/18/court-rules-bidens-vaccine-mandate-for-large-employers-can-take-effect
Tags
- government
- Omicron
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Annotators
URL
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www.bmj.com www.bmj.com
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Richterman, A., Scott, J., & Cevik, M. (2021). Covid-19 vaccines, immunity, and boosters. BMJ, 375, n3105. https://doi.org/10.1136/bmj.n3105
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www.theguardian.com www.theguardian.com
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Reuters. (2021, December 20). Moderna says booster produces strong antibody response to Omicron. The Guardian. https://www.theguardian.com/world/2021/dec/20/moderna-booster-strong-antibody-response-omicron-covid-vaccine-variant
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twitter.com twitter.com
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Colin Davis. (2021, December 20). Update for 20th Dec. The trend line still reflects 1.8 day doubling (it’s 1.7 days if we look at just the last week). Today’s number is down, but I wouldn’t read too much into that at this point. Https://t.co/kOCjxhRbop [Tweet]. @ProfColinDavis. https://twitter.com/ProfColinDavis/status/1472969632705392640
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www.latimes.com www.latimes.com
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Facebook, Twitter, options, S. more sharing, Facebook, Twitter, LinkedIn, Email, URLCopied!, C. L., & Print. (2021, December 17). Op-Ed: How can we prevent a second winter of despair with Omicron? Los Angeles Times. https://www.latimes.com/opinion/story/2021-12-17/op-ed-averting-a-second-winter-of-despair-with-omicron
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SPI-M-O: Consensus statement on COVID-19, 15 December 2021. (n.d.). GOV.UK. Retrieved 20 December 2021, from https://www.gov.uk/government/publications/spi-m-o-consensus-statement-on-covid-19-15-december-2021/spi-m-o-consensus-statement-on-covid-19-15-december-2021
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Harry Spoelstra. (2021, November 26). Breaking: ECDC has designated B.1.1.529 today as a #VOC https://t.co/WyLnc9xUoJ [Tweet]. @HarrySpoelstra. https://twitter.com/HarrySpoelstra/status/1464261361370910721
Tags
- travel ban
- COVID-19
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Annotators
URL
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twitter.com twitter.com
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Harry Spoelstra. (2021, November 26). Breaking: ECDC has designated B.1.1.529 today as a #VOC https://t.co/WyLnc9xUoJ [Tweet]. @HarrySpoelstra. https://twitter.com/HarrySpoelstra/status/1464261361370910721
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twitter.com twitter.com
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Eric Topol. (2021, November 27). View of key mutations of Omicron’s 50, with 30 in the spike protein, 15 in its receptor binding domain https://ft.com/content/42c5ff3d-e676-4076-9b9f-7243a00cba5e http://covariants.org @EllingUlrich @_b_meyer https://t.co/onMoNFVLFJ [Tweet]. @EricTopol. https://twitter.com/EricTopol/status/1464452102382448643
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twitter.com twitter.com
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World Health Organization (WHO). (2021, December 2). Dr @mvankerkhove updates on what we know so far about the new #COVID19 variant of concern, Omicron ⬇️ https://t.co/43jqMUotrX [Tweet]. @WHO. https://twitter.com/WHO/status/1466376465990180864
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twitter.com twitter.com
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Arieh Kovler. (2021, November 26). Israel has identified four cases of the B.1.1.529 variant, all recent travellers. One case, a 32-year-old woman returning from South Africa, was triple vaccinated with Pfizer and had her 3rd dose just two months ago. [Tweet]. @ariehkovler. https://twitter.com/ariehkovler/status/1464190991204859919
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twitter.com twitter.com
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Acme Birch Beer. (2021, December 13). A long thread on @NYTimes/@washingtonpost/@TheAtlantic’s favorite prediction-making expert, Monica Gandhi. Feb 22, 2021: “I need to say variants, shmariants, okay? I’m sorry, I don’t know what kind of trouble that’s going to get me in...” https://t.co/CwQL6QBG78 [Tweet]. @KindAndUnblind. https://twitter.com/KindAndUnblind/status/1470389931679883268
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twitter.com twitter.com
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Benjy Renton. (2021, December 14). New data from CDC finds that the Omicron variant represented 2.9% of new cases in the US last week. Https://covid.cdc.gov/covid-data-tracker/#variant-proportions https://t.co/AqM8a1vekm [Tweet]. @bhrenton. https://twitter.com/bhrenton/status/1470765699907870729
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twitter.com twitter.com
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Tom Moultrie. (2021, December 17). A 1-figure Gauteng update, bringing in data through Wednesday 15/12 (PCR only; by date of collection). The turn continues. On similar metrics (not shown) ALL northern provinces (NW, GT, MP, LP) seem to have now turned. Https://t.co/6Bh3kZsooK [Tweet]. @tomtom_m. https://twitter.com/tomtom_m/status/1471723711287996416
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twitter.com twitter.com
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Jay Varma. (2021, December 16). Um, we’ve never seen this before in #NYC. Test positivity doubling in three days 12/9—3.9% 12/10—4.2% 12/11—6.4% 12/12—7.8% Note: Test % is only for PCR & NYC does more per capita daily than most places ~67K PCR/day + 19K [reported] antigen over past few days (1/2) https://t.co/PhxsZq55jn [Tweet]. @DrJayVarma. https://twitter.com/DrJayVarma/status/1471485885447389186
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twitter.com twitter.com
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Carl Zimmer. (2021, December 15). Connecticut has gone practically vertical https://nytimes.com/interactive/2021/us/covid-cases.html?referringSource=articleShare https://t.co/mBlybyTpAA [Tweet]. @carlzimmer. https://twitter.com/carlzimmer/status/1470986172583317506
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www.medrxiv.org www.medrxiv.org
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Wilhelm, A., Widera, M., Grikscheit, K., Toptan, T., Schenk, B., Pallas, C., Metzler, M., Kohmer, N., Hoehl, S., Helfritz, F. A., Wolf, T., Goetsch, U., & Ciesek, S. (2021). Reduced Neutralization of SARS-CoV-2 Omicron Variant by Vaccine Sera and monoclonal antibodies (p. 2021.12.07.21267432). https://doi.org/10.1101/2021.12.07.21267432
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twitter.com twitter.com
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Theo Sanderson. (2021, December 16). 71.9% of cases in London with specimens from 13 December were Omicron. Overall London cases are already reaching the maximum values ever seen in the pandemic. Https://t.co/CJF5kQqBpl [Tweet]. @theosanderson. https://twitter.com/theosanderson/status/1471537690650812420
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news.sky.com news.sky.com
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COVID news live: Record number of boosters given out for second day - as Whitty predicts Omicron wave will ‘peak quite fast’. (n.d.). Sky News. Retrieved 17 December 2021, from https://news.sky.com/story/covid-news-live-professor-chris-whitty-to-be-questioned-by-mps-on-omicron-as-a-million-could-be-isolating-with-covid-on-christmas-day-12469075
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URL
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github.com github.com
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Proposal to split B.1.1.529 to incorporate a newly characterised sibling lineage · Issue #361 · cov-lineages/pango-designation. (n.d.). GitHub. Retrieved 17 December 2021, from https://github.com/cov-lineages/pango-designation/issues/361
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twitter.com twitter.com
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ReconfigBehSci. (2021, December 14). RT @AlastairGrant4: R-value for Omicron across England is currently 5.5 (C.I 4.7-6.4) Doubling time 2.04 days (CI 1.87—2.23) 22% of TaqPa… [Tweet]. @SciBeh. https://twitter.com/SciBeh/status/1470954045242494983
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www.nature.com www.nature.com
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Mallapaty, S., Callaway, E., Kozlov, M., Ledford, H., Pickrell, J., & Van Noorden, R. (2021). How COVID vaccines shaped 2021 in eight powerful charts. Nature. https://doi.org/10.1038/d41586-021-03686-x
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Maxmen, A. (2021). Omicron blindspots: Why it’s hard to track coronavirus variants. Nature. https://doi.org/10.1038/d41586-021-03698-7
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twitter.com twitter.com
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Dr Duncan Robertson. (2021, December 15). Cases on the dashboard exclude reinfections.And there are a lot of reinfections as far as Omicron is concerned h/t @AlistairHaimes and @Peston And this is only cases reported today—Not from infections today With a 2-day doubling time for Omicron, this isn’t great https://t.co/fU2RLhshtn [Tweet]. @Dr_D_Robertson. https://twitter.com/Dr_D_Robertson/status/1471156538681315336
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www.theguardian.com www.theguardian.com
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Boffey, D. (2021, December 15). Omicron likely to accelerate death toll in Europe, says health agency. The Guardian. https://www.theguardian.com/world/2021/dec/15/omicron-covid-likely-accelerate-death-rate-europe-eu-health-agency
Tags
- forecasting
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Annotators
URL
theguardian.com/world/2021/dec/15/omicron-covid-likely-accelerate-death-rate-europe-eu-health-agency -
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Covid: UK reports highest daily cases since the pandemic began. (2021, December 15). BBC News. https://www.bbc.com/news/uk-59673150
Tags
- education
- COVID-19
- data
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Annotators
URL
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www.abc.net.au www.abc.net.au
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NSW could have 25,000 COVID-19 cases per day by next month, modelling suggests. (2021, December 14). ABC News. https://www.abc.net.au/news/2021-12-15/nsw-covid-19-infections-reach-three-month-high-1360-new-cases/100700866
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twitter.com twitter.com
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Prof. Christina Pagel. (2021, December 13). Https://t.co/bpkyKUYzXS [Tweet]. @chrischirp. https://twitter.com/chrischirp/status/1470427357626478593
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twitter.com twitter.com
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Carl T. Bergstrom. (2021, November 26). I’d be careful not to overinterpret the following graph from @jburnmurdoch. Yes, the fraction of B.1.1.529 is increasing faster. But I think that is that is largely due to different denominators. Https://t.co/NDhSqJpLlw [Tweet]. @CT_Bergstrom. https://twitter.com/CT_Bergstrom/status/1464061037292883970
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twitter.com twitter.com
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NSW Health. (2021, November 28). OMICRON VARIANT CONFIRMED IN NSW CASES https://t.co/s0Z4hWYsSH [Tweet]. @NSWHealth. https://twitter.com/NSWHealth/status/1464837049291186180
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www.irishtimes.com www.irishtimes.com
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McQuinn, C. (n.d.). Schools and childcare services to get up to €72m for ventilation. The Irish Times. Retrieved December 13, 2021, from https://www.irishtimes.com/news/health/schools-and-childcare-services-to-get-up-to-72m-for-ventilation-1.4753597
Tags
- COVID-19
- children
- hospitalization
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Annotators
URL
irishtimes.com/news/health/schools-and-childcare-services-to-get-up-to-72m-for-ventilation-1.4753597 -
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Mahase, E. (2021). Covid-19: Do vaccines work against omicron—and other questions answered. BMJ, 375, n3062. https://doi.org/10.1136/bmj.n3062
Tags
- travel ban
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twitter.com twitter.com
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💉💉 Henry Madison DPhil. (2021, December 12). Denmark, already up shit creek because of Delta, has just met Omicron. Near-vertical growth. #auspol #covid19aus https://t.co/Jhvs3dWWhK [Tweet]. @RageSheen. https://twitter.com/RageSheen/status/1470125914788818944
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www.medrxiv.org www.medrxiv.org
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Roessler, A., Riepler, L., Bante, D., Laer, D. von, & Kimpel, J. (2021). SARS-CoV-2 B.1.1.529 variant (Omicron) evades neutralization by sera from vaccinated and convalescent individuals (p. 2021.12.08.21267491). https://doi.org/10.1101/2021.12.08.21267491
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www.gavi.org www.gavi.org
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What do we know about the new B.1.1.529 coronavirus variant and should we be worried? (n.d.). Retrieved 10 December 2021, from https://www.gavi.org/vaccineswork/what-we-know-about-new-b11529-coronavirus-variant-so-far
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www.thelancet.com www.thelancet.com
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Diseases, T. L. I. (2021). Emerging SARS-CoV-2 variants: Shooting the messenger. The Lancet Infectious Diseases, 0(0). https://doi.org/10.1016/S1473-3099(21)00770-2
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www.theguardian.com www.theguardian.com
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Sridhar, D. (2021, December 9). Plan B shows Britain is still chasing Covid. Here’s how we can get ahead of it. The Guardian. https://www.theguardian.com/commentisfree/2021/dec/09/plan-b-britain-covid-omicron-vaccinating-travel
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twitter.com twitter.com
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Theo Sanderson. (2021, December 8). SGTF Regional data to Dec 6 from https://assets.publishing.service.gov.uk/government/uploads/system/uploads/attachment_data/file/1039470/Omicron_SGTF_case_update.pdf (Last data point would be expected to be incomplete based on the dates and so to slightly understate growth. And also will already have moved substantially from the midpoint of that last week on 3rd Dec.) https://t.co/1L6tM0sXIZ [Tweet]. @theosanderson. https://twitter.com/theosanderson/status/1468648673668128775
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www.theguardian.com www.theguardian.com
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Mason, R., & Devlin, H. (2021, December 8). Boris Johnson rushes in Covid plan B amid Christmas party scandal. The Guardian. https://www.theguardian.com/world/2021/dec/08/boris-johnson-plan-b-covid-measures-england-omicron-vaccine-passports-mask-wearing
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inews.co.uk inews.co.uk
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Omicron cases may be far higher than currently confirmed, variant marker analysis reveals. (2021, December 8). Inews.Co.Uk. https://inews.co.uk/news/health/omicron-covid-cases-may-be-seven-times-higher-than-confirmed-1341156
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www.theatlantic.com www.theatlantic.com
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Zhang, S. (2021, December 8). Omicron’s Explosive Growth Is a Warning Sign. The Atlantic. https://www.theatlantic.com/health/archive/2021/12/omicron-spread-infection-severity/620948/
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www.bbc.co.uk www.bbc.co.uk
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New Covid variant: How worried should we be? (2021, November 25). BBC News. https://www.bbc.com/news/health-59418127
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twitter.com twitter.com
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Sean Phelan. (2021, November 26). Striking how some media coverage is assuming (without caveats) that the Belgian case brought the new variant “from” Egypt or Turkey.There’s no chance they picked it up after returning to Belgium of course. How could that happen..we only have a 7-day average of 17,000 cases a day [Tweet]. @seanphelan8. https://twitter.com/seanphelan8/status/1464252432033136659
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www.theguardian.com www.theguardian.com
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Davies, R., & Sweney, M. (2021, November 26). FTSE 100 hit by biggest fall since June 2020 amid new variant fears. The Guardian. https://www.theguardian.com/business/2021/nov/26/travel-and-aviation-shares-tumble-over-new-covid-variant-fears
Tags
- travel
- travel ban
- effectiveness
- Omicron
- COVID-19
- is:news
- global economy
- vaccine
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- UK
- stock market
- FTSE
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Annotators
URL
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www.theguardian.com www.theguardian.com
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Devlin, H., & Kollewe, J. (2021, November 26). BioNTech says it could tweak Covid vaccine in 100 days if needed. The Guardian. https://www.theguardian.com/society/2021/nov/26/biontech-says-it-could-tweak-covid-vaccine-in-100-days-if-needed
Tags
- effectiveness
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- escape variant
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Annotators
URL
theguardian.com/society/2021/nov/26/biontech-says-it-could-tweak-covid-vaccine-in-100-days-if-needed -
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