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Aug 2023
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O-GlcNAcylation of Raptor transduces glucose signals to mTORC1

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DPPA3-HIF1α axis controls colorectal cancer chemoresistance by imposing a slow cell-cycle phenotype

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Jul 2023
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Discovery of a glutathione utilization pathway in Francisella that shows functional divergence between environmental and pathogenic species

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DIRAS3 enhances RNF19B-mediated RAC1 ubiquitination and degradation in non-small-cell lung cancer cells

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Marchf6 E3 ubiquitin ligase critically regulates endoplasmic reticulum stress, ferroptosis, and metabolic homeostasis in POMC neurons

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Jun 2023
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Lysosomal LAMP proteins regulate lysosomal pH by direct inhibition of the TMEM175 channel

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The OsbHLH002/OsICE1-OSH1 module orchestrates secondary cell wall formation in rice

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A functional link between lariat debranching enzyme and the intron-binding complex is defective in non-photosensitive trichothiodystrophy

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TRIM21 is a druggable target for the treatment of metastatic colorectal cancer through ubiquitination and activation of MST2

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J of Bone Mineral Res - 2023 - Allen - Reduced GS domain serine threonine requirements of Fibrodysplasia Ossificans-html.html

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ATF3 stimulates FSHβ expression in vitro, but is dispensable for FSH production in murine gonadotropes in vivo

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  DOI: 10.1210/endocr/bqad050
  
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academic.oup.com/endo/article/164/5/bqad050/7084717
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BPS Publications

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52.53.155.43/1687060009c035eea75940e2b9808e7b90a23cc3/British J Pharmacology - 2023 - Glenn - RAMP and MRAP Accessory Proteins have Selective Effects on Expression and-html.html
May 2023
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EWSR1 maintains centromere identity

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1. scibot 27 May 2023
  
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  DOI: 10.1016/j.celrep.2023.112568
  
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A Wnt-induced lncRNA-DGCR5 splicing switch drives tumor-promoting inflammation in esophageal squamous cell carcinoma

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ERK and USP5 govern PD-1 homeostasis via deubiquitination to modulate tumor immunotherapy

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  DOI: 10.1038/s41467-023-38605-3
  
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nature.com/articles/s41467-023-38605-3
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Systematic identification of anticancer drug targets reveals a nucleus-to-mitochondria ROS-sensing pathway

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1. scibot 17 May 2023
  
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  DOI: 10.1016/j.cell.2023.04.026
  
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CKB regulates BCAR1 phosphorylation to facilitate DNA damage repair

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  DOI: 10.1016/j.isci.2023.106684
  
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Mitochondrial Bcl-xL promotes brain synaptogenesis by controlling non-lethal caspase activation

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  DOI: 10.1016/j.isci.2023.106674
  
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Protein quality control machinery supports primary ciliogenesis by eliminating GDP-bound Rab8-family GTPases

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1. scibot 13 May 2023
  
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  DOI: 10.1016/j.isci.2023.106652
  
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Bacterial NLR-related proteins protect against phage

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SMYD2 Regulates Vascular Smooth Muscle Cell Phenotypic Switching and Intimal Hyperplasia via Interaction with Myocardin

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  DOI: 10.21203/rs.3.rs-2721176/v1
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10120764/
Apr 2023
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Stress granule formation inhibits stress-induced apoptosis by selectively sequestering executioner caspases

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Glutamylation of an HIV-1 protein inhibits the immune response by hijacking STING

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A kinome-wide CRISPR screen identifies CK1α as a target to overcome enzalutamide resistance of prostate cancer

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Fluorescence-resonance-energy-transfer-based assay to estimate modulation of TDP1 activity through arginine methylation

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  DOI: 10.1016/j.xpro.2023.102218
  
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Lysine long-chain fatty acylation regulates the TEAD transcription factor

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CDK5-PRMT1-WDR24 signaling cascade promotes mTORC1 signaling and tumor growth

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Mar 2023
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Proximity labeling reveals OTUD3 as a DNA-binding deubiquitinase of cGAS

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Structural features of the Notch ankyrin domain-Deltex WWE2 domain heterodimer determined by NMR spectroscopy and functional implications

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  DOI: 10.1016/j.str.2023.03.003
  
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Suppression of preadipocyte determination by SOX4 limits white adipocyte hyperplasia in obesity

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ncbi.nlm.nih.gov/pmc/articles/PMC10030912/
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Remodeling of the Ribosomal Quality Control and Protein Translation by a Viral Ubiquitin Deconjugase

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  DOI: 10.1101/2023.01.31.526464
  
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52.53.155.43/56dd9657520d89efd227b99f30a1871711d5fdb7/2023.01.31.526464v1.full-html.html
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Gasdermin-E mediates mitochondrial damage in axons and neurodegeneration

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  DOI: 10.1016/j.neuron.2023.02.019
  
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A pair of readers of bivalent chromatin mediate formation of Polycomb-based “memory of cold” in plants

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The lysine methyltransferase SMYD5 amplifies HIV-1 transcription and is post-transcriptionally upregulated by Tat and USP11

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1. scibot 11 Mar 2023
  
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  DOI: 10.1016/j.celrep.2023.112234
  
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Functional hierarchy among different Rab27 effectors involved in secretory granule exocytosis

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1. scibot 09 Mar 2023
  
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  DOI: 10.7554/eLife.82821
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9988257/
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DAXX adds a de novo H3.3K9me3 deposition pathway to the histone chaperone network

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  DOI: 10.1016/j.molcel.2023.02.009
  
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Feb 2023
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NRF2 activation induces NADH-reductive stress, providing a metabolic vulnerability in lung cancer

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DDX47, MeCP2, and other functionally heterogeneous factors protect cells from harmful R loops

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Negative regulation of TREM2-mediated C9orf72 poly-GA clearance by the NLRP3 inflammasome

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GPR143 controls ESCRT-dependent exosome biogenesis and promotes cancer metastasis

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Loss of RanGAP1 drives chromosome instability and rapid tumorigenesis of osteosarcoma

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The interferon stimulated gene-encoded protein HELZ2 inhibits human LINE-1 retrotransposition and LINE-1 RNA-mediated type I interferon induction

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EMC3 regulates mesenchymal cell survival via control of the mitotic spindle assembly

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Collateral deletion of the mitochondrial AAA+ ATPase ATAD1 sensitizes cancer cells to proteasome dysfunction

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Executing cell-specific cross-linking immunoprecipitation and sequencing (seCLIP) in C. elegans

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Dec 2022
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The Golgi-resident protein ACBD3 concentrates STING at ER-Golgi contact sites to drive export from the ER

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Membrane Estrogen Receptor Beta is Sufficient to Mitigate Cardiac Cell Pathology

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PALI1 promotes tumor growth through competitive recruitment of PRC2 to G9A-target chromatin for dual epigenetic silencing

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Nitrate availability controls translocation of the transcription factor NAC075 for cell-type-specific reprogramming of root growth

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Structural insights into caspase ADPR deacylization catalyzed by a bacterial effector and host calmodulin

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Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation

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The oncogenic JAG1 intracellular domain is a transcriptional cofactor that acts in concert with DDX17/SMAD3/TGIF2

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Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies

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Downregulation of protein kinase C gamma reduces epithelial property and enhances malignant phenotypes in colorectal cancer cells

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Energy sensor AMPK gamma regulates translation via phosphatase PPP6C independent of AMPK alpha

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Regulation of mitophagy by the NSL complex underlies genetic risk for Parkinson’s disease at 16q11.2 and MAPT H1 loci

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Intertwined Wdr47-NTD dimer recognizes a basic-helical motif in Camsap proteins for proper central-pair microtubule formation

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CROCCP2 acts as a human-specific modifier of cilia dynamics and mTOR signaling to promote expansion of cortical progenitors

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Yeast Smy2 and its human homologs GIGYF1 and -2 regulate Cdc48/VCP function during transcription stress

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C9orf72 functions in the nucleus to regulate DNA damage repair

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Sep 2022
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Human sensory neurons modulate melanocytes through secretion of RGMB

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Ku proteins promote DNA binding and condensation of cyclic GMP-AMP synthase

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PIDDosome-SCAP crosstalk controls high-fructose-diet-dependent transition from simple steatosis to steatohepatitis

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L2Δ13, a splicing isoform of lysyl oxidase-like 2, causes adipose tissue loss via the gut microbiota and lipid metabolism

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In vivo nanoscopic landscape of neurexin ligands underlying anterograde synapse specification

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Herpesvirus-induced spermidine synthesis and eIF5A hypusination for viral episomal maintenance

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Developmental cell death of cortical projection neurons is controlled by a Bcl11a/Bcl6‐dependent pathway

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Targeting HOTAIRM1 ameliorates glioblastoma by disrupting mitochondrial oxidative phosphorylation and serine metabolism

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PEX5 translocation into and out of peroxisomes drives matrix protein import

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A non-transcriptional function of Yap regulates the DNA replication program in Xenopus laevis

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EPH receptor tyrosine kinases phosphorylate the PAR-3 scaffold protein to modulate downstream signaling networks

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Jun 2022
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Interplay between symmetric arginine dimethylation and ubiquitylation regulates TDP1 proteostasis for the repair of topoisomerase I-DNA adducts

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Deubiquitinase OTUD3 regulates metabolism homeostasis in response to nutritional stresses

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γ-secretase promotes Drosophila postsynaptic development through the cleavage of a Wnt receptor

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Neuronal NLRP3 is a parkin substrate that drives neurodegeneration in Parkinson’s disease

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Chl1 coordinates with H3K9 methyltransferase Clr4 to reduce the accumulation of RNA-DNA hybrids and maintain genome stability

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Septin 9 and phosphoinositides regulate lysosome localization and their association with lipid droplets

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Retinoic acid-induced protein 14 controls dendritic spine dynamics associated with depressive-like behaviors

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The nuclear receptor THRB facilitates differentiation of human PSCs into more mature hepatocytes

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Cholesterol suppresses GOLM1-dependent selective autophagy of RTKs in hepatocellular carcinoma

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Global post-translational modification profiling of HIV-1-infected cells reveals mechanisms of host cellular pathway remodeling

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Functional Assessment of Calcium-Sensing Receptor Variants Confirms Familial Hypocalciuric Hypercalcaemia

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MLL5 is involved in retinal photoreceptor maturation through facilitating CRX-mediated photoreceptor gene transactivation

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Ligand-independent oligomerization of TACI is controlled by the transmembrane domain and regulates proliferation of activated B cells

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Pathogen hijacks programmed cell death signaling by arginine ADPR-deacylization of caspases

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The PTN-PTPRZ signal activates the AFAP1L2-dependent PI3K-AKT pathway for oligodendrocyte differentiation: Targeted inactivation of PTPRZ activity in mice

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BPS Publications

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EB1- and EB2-dependent anterograde trafficking of TRPM4 regulates focal adhesion turnover and cell invasion

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Postnatal regulation of B-1a cell development and survival by the CIC-PER2-BHLHE41 axis

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The RNA helicase DHX16 recognizes specific viral RNA to trigger RIG-I-dependent innate antiviral immunity

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PCR-based profiling of transcription factor activity in vivo by a virus-based reporter battery

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The NDNF-like factor Nord is a Hedgehog-induced extracellular BMP modulator that regulates Drosophila wing patterning and growth

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Feb 2022
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A FBXO7/EYA2-SCFFBXW7 axis promotes AXL-mediated maintenance of mesenchymal and immune evasion phenotypes of cancer cells

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Poxviruses and paramyxoviruses use a conserved mechanism of STAT1 antagonism to inhibit interferon signaling

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MBNL1 drives dynamic transitions between fibroblasts and myofibroblasts in cardiac wound healing

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Mechanistic impact of oligomer poisoning by dominant-negative CARD11 variants

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Suppression of premature transcription termination leads to reduced mRNA isoform diversity and neurodegeneration

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Identification of the nucleotide-free state as a therapeutic vulnerability for inhibition of selected oncogenic RAS mutants

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E3 ligase RNF167 and deubiquitinase STAMBPL1 modulate mTOR and cancer progression

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The long noncoding RNA glycoLINC assembles a lower glycolytic metabolon to promote glycolysis

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Regulation of reverse electron transfer at mitochondrial complex I by unconventional Notch action in cancer stem cells

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Structure and transport mechanism of the human cholesterol transporter ABCG1

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Acetylation-dependent regulation of BRAF oncogenic function

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Allele-specific endogenous tagging and quantitative analysis of β-catenin in colorectal cancer cells

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Addition of a carboxy-terminal tail to the normally tailless gonadotropin-releasing hormone receptor impairs fertility in female mice

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  DOI: 10.7554/eLife.72937
  
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Protocol for identification and validation of 2′3′-cGAMP-binding proteins by photoaffinity probes

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TGFBR3L is an inhibin B co-receptor that regulates female fertility

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  DOI: 10.1126/sciadv.abl4391
  
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Molecular self-avoidance in synaptic neurexin complexes

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TGFBR3L is an inhibin B co-receptor that regulates female fertility

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Molecular self-avoidance in synaptic neurexin complexes

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EMSY inhibits homologous recombination repair and the interferon response, promoting lung cancer immune evasion

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A targetable LIFR−NF-κB−LCN2 axis controls liver tumorigenesis and vulnerability to ferroptosis

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The protease SPRTN and SUMOylation coordinate DNA-protein crosslink repair to prevent genome instability

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MAR1 links membrane adhesion to membrane merger during cell-cell fusion in Chlamydomonas

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A novel role of KEAP1/PGAM5 complex: ROS sensor for inducing mitophagy

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Phosphorylation at Ser68 facilitates DCAF11-mediated ubiquitination and degradation of CENP-A during the cell cycle

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Interplay between protein acetylation and ubiquitination controls MCL1 protein stability

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RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy

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The histone chaperone FACT facilitates heterochromatin spreading by regulating histone turnover and H3K9 methylation states

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Loss of FBXO31-mediated degradation of DUSP6 dysregulates ERK and PI3K-AKT signaling and promotes prostate tumorigenesis

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Aberrant RNA methylation triggers recruitment of an alkylation repair complex

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Biosensors based on peptide exposure show single molecule conformations in live cells

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Integrated omics networks reveal the temporal signaling events of brassinosteroid response in Arabidopsis

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Hair shaft miniaturization causes stem cell depletion through mechanosensory signals mediated by a Piezo1-calcium-TNF-α axis

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H3K4 di-methylation governs smooth muscle lineage identity and promotes vascular homeostasis by restraining plasticity

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Revisiting astrocyte to neuron conversion with lineage tracing in vivo

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Mitochondrial-derived compartments facilitate cellular adaptation to amino acid stress

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DOT1L O-GlcNAcylation promotes its protein stability and MLL-fusion leukemia cell proliferation

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KARATE: PKA-induced KRAS4B-RHOA-mTORC2 supercomplex phosphorylates AKT in insulin signaling and glucose homeostasis

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Cyclical phosphorylation of LRAP35a and CLASP2 by GSK3β and CK1δ regulates EB1-dependent MT dynamics in cell migration

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Directed evolution of a family of AAV capsid variants enabling potent muscle-directed gene delivery across species

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HBO1-MLL interaction promotes AF4/ENL/P-TEFb-mediated leukemogenesis

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A photoaffinity labeling strategy identified EF1A1 as a binding protein of cyclic dinucleotide 2′3′-cGAMP

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Discovery of a dual Ras and ARF6 inhibitor from a GPCR endocytosis screen

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Eukaryotic initiation factor EIF-3.G augments mRNA translation efficiency to regulate neuronal activity

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Axon morphogenesis and maintenance require an evolutionary conserved safeguard function of Wnk kinases antagonizing Sarm and Axed

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Overlapping Role of SCYL1 and SCYL3 in Maintaining Motor Neuron Viability

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Rewiring of the ubiquitinated proteome determines ageing in C. elegans

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SNF2 Family Protein Fft3 Suppresses Nucleosome Turnover to Promote Epigenetic Inheritance and Proper Replication

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HDAC6 Suppresses Age-Dependent Ectopic Fat Accumulation by Maintaining the Proteostasis of PLIN2 in Drosophila

1
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Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1

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Targeting UBE4A Revives Viperin Protein in Epithelium to Enhance Host Antiviral Defense

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  Anti-Flag
  
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The novel SH3 domain protein Dlish/CG10933 mediates fat signaling in Drosophila by binding and regulating Dachs

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A new class of disordered elements controls DNA replication through initiator self-assembly

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Tumor-Suppressor Inactivation of GDF11 Occurs by Precursor Sequestration in Triple-Negative Breast Cancer

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Exon Junction Complexes Suppress Spurious Splice Sites to Safeguard Transcriptome Integrity

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Intrinsically Disordered Protein TEX264 Mediates ER-phagy

1
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  Rabbit polyclonal anti-FLAG
  
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Microbially Produced Imidazole Propionate Impairs Insulin Signaling through mTORC1

1
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  RRID: AB_439687
  
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Tinagl1 Suppresses Triple-Negative Breast Cancer Progression and Metastasis by Simultaneously Inhibiting Integrin/FAK and EGFR Signaling

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HDAC6 Suppresses Age-Dependent Ectopic Fat Accumulation by Maintaining the Proteostasis of PLIN2 in Drosophila

1
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  RRID: AB_439687
  
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Characterization of a Mouse Model of Börjeson-Forssman-Lehmann Syndrome

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Functional interdependence of the actin nucleator Cobl and Cobl-like in dendritic arbor development

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Exosome component 1 cleaves single-stranded DNA and sensitizes human kidney renal clear cell carcinoma cells to poly(ADP-ribose) polymerase inhibitor

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BTN2A1, an immune checkpoint targeting Vγ9Vδ2 T cell cytotoxicity against malignant cells

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Mutually repulsive EphA7-EfnA5 organize region-to-region corticopontine projection by inhibiting collateral extension

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  DOI: 10.1523/JNEUROSCI.0367-20.2021
  
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In trans neuregulin3-Caspr3 interaction controls DA axonal bassoon cluster development

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Dysregulation of the NRG1/ERBB pathway causes a developmental disorder with gastrointestinal dysmotility in humans

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Desmosomes polarize and integrate chemical and mechanical signaling to govern epidermal tissue form and function

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Glucose starvation induces autophagy via ULK1-mediated activation of PIKfyve in an AMPK-dependent manner

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SIRT6 transcriptionally regulates fatty acid transport by suppressing PPARγ

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  DOI: 10.1016/j.celrep.2021.109190
  
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TRIM7 inhibits enterovirus replication and promotes emergence of a viral variant with increased pathogenicity

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sciencedirect.com/science/article/pii/S0092867421005821
May 2021
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SAM homeostasis is regulated by CFIm-mediated splicing of MAT2A

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1. scibot 27 May 2021
  
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  RRID:AB_439687
  
  DOI: 10.7554/eLife.64930
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8139829/
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Membraneless condensates by Rapsn phase separation as a platform for neuromuscular junction formation

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1. scibot 26 May 2021
  
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  DOI: 10.1016/j.neuron.2021.04.021
  
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UBQLN2-HSP70 axis reduces poly-Gly-Ala aggregates and alleviates behavioral defects in the C9ORF72 animal model

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1. scibot 15 May 2021
  
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  DOI: 10.1016/j.neuron.2021.04.023
  
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Dux-Mediated Corrections of Aberrant H3K9ac during 2-Cell Genome Activation Optimize Efficiency of Somatic Cell Nuclear Transfer

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1. scibot 09 May 2021
  
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  DOI: 10.1016/j.stem.2020.09.006
  
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sciencedirect.com/science/article/pii/S1934590920304525
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Dcaf11 activates Zscan4-mediated alternative telomere lengthening in early embryos and embryonic stem cells

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1. scibot 09 May 2021
  
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  DOI: 10.1016/j.stem.2020.11.018
  
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The Zika Virus Capsid Disrupts Corticogenesis by Suppressing Dicer Activity and miRNA Biogenesis

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1. scibot 09 May 2021
  
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  DOI: 10.1016/j.stem.2020.07.012
  
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Developmental Attenuation of Neuronal Apoptosis by Neural-Specific Splicing of Bak1 Microexon

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1. scibot 08 May 2021
  
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  DOI: 10.1016/j.neuron.2020.06.036
  
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CHK1 Inhibitor Blocks Phosphorylation of FAM122A and Promotes Replication Stress

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1. scibot 07 May 2021
  
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  DOI: 10.1016/j.molcel.2020.10.008
  
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sciencedirect.com/science/article/pii/S1097276520306912
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RNF126-Mediated Reubiquitination Is Required for Proteasomal Degradation of p97-Extracted Membrane Proteins

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1. scibot 07 May 2021
  
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  DOI: 10.1016/j.molcel.2020.06.023
  
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sciencedirect.com/science/article/pii/S1097276520304251
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Tandem Deubiquitination and Acetylation of SPRTN Promotes DNA-Protein Crosslink Repair and Protects against Aging

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1. scibot 07 May 2021
  
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  DOI: 10.1016/j.molcel.2020.06.027
  
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sciencedirect.com/science/article/pii/S1097276520304299
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Caspase-1 Engages Full-Length Gasdermin D through Two Distinct Interfaces That Mediate Caspase Recruitment and Substrate Cleavage

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1. scibot 06 May 2021
  
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  DOI: 10.1016/j.immuni.2020.06.007
  
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sciencedirect.com/science/article/pii/S1074761320302375
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Prenylation of Axonally Translated Rac1 Controls NGF-Dependent Axon Growth

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1. scibot 05 May 2021
  
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  DOI: 10.1016/j.devcel.2020.05.020
  
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sciencedirect.com/science/article/pii/S1534580720304093
faseb.onlinelibrary.wiley.com faseb.onlinelibrary.wiley.com

TMPRSS11a is a novel age‐altered, tissue specific regulator of migration and wound healing

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  DOI: 10.1096/fj.202002253RRR
  
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faseb.onlinelibrary.wiley.com/doi/10.1096/fj.202002253RRR
Apr 2021
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Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria

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1. scibot 27 Apr 2021
  
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  DOI: 10.1016/j.chembiol.2020.08.011
  
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sciencedirect.com/science/article/pii/S2451945620303330

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