406 Matching Annotations
  1. Dec 2023
  2. gigabytejournal.com gigabytejournal.com
    Genome assembly and annotation of the king ratsnake, Elaphe carinata
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    gigabytejournal.com/articles/101
  3. 52.53.155.43 52.53.155.43
    physiolgenomics.00070.2023-html.html
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    52.53.155.43/37a553f0bc437dc481c95fcb3601b715ab4e52f5/physiolgenomics.00070.2023-html.html
  4. journals.physiology.org journals.physiology.org
    Single-cell reconstruction and mutation enrichment analysis identifies dysregulated cardiomyocyte and endothelial cells in congenital heart disease
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    journals.physiology.org/doi/10.1152/physiolgenomics.00070.2023
  5. Nov 2023
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    IL23R as an indicator of immune infiltration and poor prognosis in intrahepatic cholangiocarcinoma: a bioinformatics analysis
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    ncbi.nlm.nih.gov/pmc/articles/PMC10643953/
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly and annotation of the Brown-Spotted Pit viper Protobothrops mucrosquamatus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10644238/
  8. dx.doi.org dx.doi.org
    Population-specific Mutation Patterns in Breast Tumors from African American, European American, and Kenyan Patients
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    dx.doi.org/10.1158/2767-9764.CRC-23-0165
  9. www.biorxiv.org www.biorxiv.org
    Age-induced midbrain-striatum assembloids model early phenotypes of Parkinson’s disease
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    biorxiv.org/content/10.1101/2023.10.28.564305v1
  10. Oct 2023
  11. www.sciencedirect.com www.sciencedirect.com
    Identifying genetic determinants of Streptococcus pyogenes-host interactions in a murine intact skin infection model
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    sciencedirect.com/science/article/pii/S221112472301344X
  12. dx.doi.org dx.doi.org
    Chromatin accessibility landscape of human triple-negative breast cancer cell lines reveals variation by patient donor ancestry
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    dx.doi.org/10.1158/2767-9764.CRC-23-0236
  13. www-nature-com.ezproxy.rice.edu www-nature-com.ezproxy.rice.edu
    An expanded CRISPR–Cas9-assisted recombineering toolkit for engineering genetically intractable Pseudomonas aeruginosa isolates
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    www-nature-com.ezproxy.rice.edu/articles/s41596-023-00882-z
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  15. Sep 2023
  16. link.springer.com link.springer.com
    Pan cancer characterization of genes whose expression has been associated with LINE-1 antisense promoter activity
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    link.springer.com/article/10.1186/s13100-023-00300-x
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Thermophilic methane oxidation is widespread in Aotearoa-New Zealand geothermal fields
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    ncbi.nlm.nih.gov/pmc/articles/PMC10502179/
  18. Aug 2023
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    CRTAC1 enhances the chemosensitivity of non-small cell lung cancer to cisplatin by eliciting RyR-mediated calcium release and inhibiting Akt1 expression
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    ncbi.nlm.nih.gov/pmc/articles/PMC10460435/
  20. www.sciencedirect.com www.sciencedirect.com
    Role of miR-301b-3p/5p in breast cancer: A study based on the cancer GenomeAtlas program (TCGA) and bioinformatics analysis
    1
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    sciencedirect.com/science/article/pii/S2468054023000495
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Dynamic intestinal stem cell plasticity and lineage remodeling by a nutritional environment relevant to human risk for tumorigenesis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10390890/
  22. link.springer.com link.springer.com
    Quantitative proteomics profiling reveals the inhibition of trastuzumab antitumor efficacy by phosphorylated RPS6 in gastric carcinoma
    1
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    link.springer.com/article/10.1007/s00280-023-04571-2
  23. Jul 2023
  24. www.nature.com www.nature.com
    A novel transcription factor SIPA1: identification and verification in triple-negative breast cancer
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    nature.com/articles/s41388-023-02787-3
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The diagnostic significance of the ZNF gene family in pancreatic cancer: a bioinformatics and experimental study
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10311482/
  26. Jun 2023
  27. europepmc.org europepmc.org
    F1000Research Article: Integrative transcriptomic and proteomic study of Zika viral infection reveals potential mechanisms for oncolytic therapy in neuroblastoma.
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    europepmc.org/article/ppr/ppr679275
  28. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Single-cell RNA-seq uncovers novel metabolic functions of Schwann cells beyond myelination
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    onlinelibrary.wiley.com/doi/10.1111/jnc.15877
  29. 52.53.155.43 52.53.155.43
    mcr-22-1000-html.html
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    52.53.155.43/c8a7d90411380a5d00aec21a4fa3b051e71d3402/mcr-22-1000-html.html
  30. May 2023
  31. www.sciencedirect.com www.sciencedirect.com
    Oxygen-induced pathological angiogenesis promotes intense lipid synthesis and remodeling in the retina
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    sciencedirect.com/science/article/pii/S2589004223008544
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mycobacterial metabolic model development for drug target identification
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10154535/
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untargeted Metabolomics Studies of H9c2 Cardiac Cells Submitted to Oxidative Stress, β-Adrenergic Stimulation and Doxorubicin Treatment: Investigation of Cardiac Biomarkers
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9277393/
  34. Apr 2023
  35. www.biorxiv.org www.biorxiv.org
    The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
    1
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    biorxiv.org/content/10.1101/2023.03.20.533390v1
  36. link.springer.com link.springer.com
    Comprehensive proteomics and platform validation of urinary biomarkers for bladder cancer diagnosis and staging
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    link.springer.com/article/10.1186/s12916-023-02813-x
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first genome assembly of the amphibian nematode parasite (Aplectana chamaeleonis)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10043924/
  38. link.springer.com link.springer.com
    NGS-based profiling identifies miRNAs and pathways dysregulated in cisplatin-resistant esophageal cancer cells
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    link.springer.com/article/10.1007/s10142-023-01041-z
  39. Mar 2023
  40. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Study on tillering stage cold tolerant response in overwintering cultivated rice via comparative transcriptomic
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    onlinelibrary.wiley.com/doi/10.1002/fes3.450
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Association study between polymorphisms in DNA methylation-related genes and testicular germ cell tumor risk
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    ncbi.nlm.nih.gov/pmc/articles/PMC9444936/
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomics profiling of vitreous humor reveals complement and coagulation components, adhesion factors, and neurodegeneration markers as discriminatory biomarkers of vitreoretinal eye diseases
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9978817/
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic identification, annotation, and comparative analysis of Vacuolar-type ATP synthase subunits in Diaphorina citri
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9933544/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A draft genome assembly of the eastern banjo frog Limnodynastes dumerilii dumerilii (Anura: Limnodynastidae)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632003/
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the humpback puffer, Tetraodon palembangensis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632004/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Neoadjuvant therapy induces a potent immune response to sarcoma, dominated by myeloid and B cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC9953754/
  47. Feb 2023
  48. www.mdpi.com www.mdpi.com
    Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms
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    mdpi.com/2075-4450/14/2/144
  49. Jan 2023
  50. www.sciencedirect.com www.sciencedirect.com
    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
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    sciencedirect.com/science/article/pii/S2666379123000058
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Landscape and clinical impact of metabolic alterations in non-squamous non-small cell lung cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC9830272/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    EXOC4 Promotes Diffuse-Type Gastric Cancer Metastasis via Activating FAK Signal
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    ncbi.nlm.nih.gov/pmc/articles/PMC9381130/
  53. Dec 2022
  54. www.sciencedirect.com www.sciencedirect.com
    IL-17/CXCL5 signaling within the oligovascular niche mediates human and mouse white matter injury
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    sciencedirect.com/science/article/pii/S2211124722017405
  55. aacrjournals.org aacrjournals.org
    Stress-mediated attenuation of translation undermines T-cell activity in cancer
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    aacrjournals.org/cancerres/article/82/23/4386/710692/Stress-Mediated-Attenuation-of-Translation
  56. 52.53.155.43 52.53.155.43
    can-22-1744-html.html
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    52.53.155.43/ad84fbadafd7207ef01b11f7e83790e81459d855/can-22-1744-html.html
  57. Nov 2022
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell RNA sequencing reveals different signatures of mesenchymal stromal cell pluripotent-like and multipotent populations
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    ncbi.nlm.nih.gov/pmc/articles/PMC9633745/
  59. link.springer.com link.springer.com
    Downregulation of miR-671-5p promotes IL-10 mRNA increase in porcine moDCs stimulated with the probiotic BB12
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    link.springer.com/article/10.1007/s11033-022-08040-6
  60. Oct 2022
  61. aacrjournals.org aacrjournals.org
    CircIPO7 Promotes Nasopharyngeal Carcinoma Metastasis and Cisplatin Chemoresistance by Facilitating YBX1 Nuclear Localization
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    aacrjournals.org/clincancerres/article/28/20/4521/709577/CircIPO7-Promotes-Nasopharyngeal-Carcinoma
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    NOTCH induced MDSC recruitment after oHSV virotherapy in CNS cancer models modulates anti-tumor immunotherapy
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    ncbi.nlm.nih.gov/pmc/articles/PMC8976724/
  63. Sep 2022
  64. f1000research.com f1000research.com
    F1000Research Article: Identification of prognostic biomarkers of invasive ductal carcinoma by an integrated bioinformatics approach.
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    f1000research.com/articles/11-1075
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Lactate: A regulator of immune microenvironment and a clinical prognosis indicator in colorectal cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC9458902/
  66. www.sciencedirect.com www.sciencedirect.com
    Acquired semi-squamatization during chemotherapy suggests differentiation as a therapeutic strategy for bladder cancer
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    sciencedirect.com/science/article/pii/S1535610822003749
  67. Aug 2022
  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Global signalling network analysis of luminal T47D breast cancer cells in response to progesterone
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    ncbi.nlm.nih.gov/pmc/articles/PMC9403329/
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Warming northward shifting southern limits of the iconic temperate seagrass (Zostera marina)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9357840/
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Effects of 6-Hydroxykaempferol: A Potential Natural Product for Amelioration of Tendon Impairment
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    ncbi.nlm.nih.gov/pmc/articles/PMC9354238/
  71. Jul 2022
  72. 52.53.155.43 52.53.155.43
    epi-22-0123-html.html
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    52.53.155.43/3de3cb90d6c0869d24f8e6633a22fe84eaf377d7/epi-22-0123-html.html
  73. link.springer.com link.springer.com
    Lung cancer survival prediction and biomarker identification with an ensemble machine learning analysis of tumor core biopsy metabolomic data
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    link.springer.com/article/10.1007/s11306-022-01918-3
  74. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
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    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15910
  75. Jun 2022
  76. 52.53.155.43 52.53.155.43
    ccr-21-4383-html.html
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    52.53.155.43/70c3e9c9ffa7c7ab0c7dc7cd7128f07ac51f8f4e/ccr-21-4383 (2)-html.html
  77. 52.53.155.43 52.53.155.43
    KCa3.1 differentially regulates trachea and bronchi epithelial gene expression in a chronic-asthma mouse model
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    52.53.155.43/bdb24171b1be34ca6d57a161f01e6067da1b2327/physiolgenomics.00134.2021-html.html
  78. 52.53.155.43 52.53.155.43
    ccr-21-4383-html.html
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    52.53.155.43/f54daa903a289164aa37c1e4ec11126d2e8ee994/ccr-21-4383-html.html
  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pan-Cancer Single-Cell Analysis Reveals the Core Factors and Pathway in Specific Cancer Stem Cells of Upper Gastrointestinal Cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC9136039/
  80. May 2022
  81. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
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    f1000research.com/articles/11-530
  82. Apr 2022
  83. www.sciencedirect.com www.sciencedirect.com
    Trans-omics analysis of insulin action reveals a cell growth sub-network which co-regulates anabolic processes
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    sciencedirect.com/science/article/pii/S2589004222005016
  84. www.nature.com www.nature.com
    Identifying a confused cell identity for esophageal squamous cell carcinoma
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    nature.com/articles/s41392-022-00946-8
  85. aacrjournals.org aacrjournals.org
    Autocrine canonical Wnt signaling primes noncanonical signaling through ROR1 in metastatic castration-resistant prostate cancer
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    aacrjournals.org/cancerres/article/82/8/1518/694338/Autocrine-Canonical-Wnt-Signaling-Primes
  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Novel mouse models of bladder cancer identify a prognostic signature associated with risk of disease progression
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    ncbi.nlm.nih.gov/pmc/articles/PMC8609963/
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality assembly reveals genomic characteristics, phylogenetic status, and causal genes for leucism plumage of Indian peafowl
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    ncbi.nlm.nih.gov/pmc/articles/PMC8985102/
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the globe skimmer dragonfly (Pantala flavescens)
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    ncbi.nlm.nih.gov/pmc/articles/PMC8978299/
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tenascin-C can Serve as an Indicator for the Immunosuppressive Microenvironment of Diffuse Low-Grade Gliomas
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8966496/
  90. Feb 2022
  91. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell analysis of human glioma and immune cells identifies S100A4 as an immunotherapy target
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    ncbi.nlm.nih.gov/pmc/articles/PMC8828877/
  92. Jan 2022
  93. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    Modulation of the Human Pancreatic Ductal Adenocarcinoma Immune Microenvironment by Stereotactic Body Radiotherapy
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    clincancerres.aacrjournals.org/content/28/1/150
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SIPA1 Enhances Aerobic Glycolysis Through HIF-2α Pathway to Promote Breast Cancer Metastasis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8790513/
  95. Dec 2021
  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Lysine Acetylation in the Proteome of Renal Tubular Epithelial Cells in Diabetic Nephropathy
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8657754/
  97. Nov 2021
  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An epigenetic mechanism underlying chromosome 17p deletion-driven tumorigenesis
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    ncbi.nlm.nih.gov/pmc/articles/PMC8591992/
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Alterations in Glycerolipid and Fatty Acid Metabolic Pathways in Alzheimer's Disease Identified by Urinary Metabolic Profiling: A Pilot Study
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    ncbi.nlm.nih.gov/pmc/articles/PMC8578168/
  100. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated Genomic Profiling and Drug Screening of Patient-Derived Cultures Identifies Individualized Copy Number-Dependent Susceptibilities Involving PI3K Pathway and 17q Genes in Neuroblastoma
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8551924/
  101. Oct 2021
  102. www.sciencedirect.com www.sciencedirect.com
    Establishment of a prognostic model of ten transcription factors in gastric cancer
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    sciencedirect.com/science/article/pii/S0888754321003736
  103. www.nature.com www.nature.com
    Single-cell RNA sequencing for the identification of early-stage lung cancer biomarkers from circulating blood
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    nature.com/articles/s41525-021-00248-y
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Role of long noncoding RNA MEG3/miR-378/GRB2 axis in neuronal autophagy and neurological functional impairment in ischemic stroke
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    ncbi.nlm.nih.gov/pmc/articles/PMC7549047/
  105. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    Prediction of Immunotherapy Response in Melanoma through Combined Modeling of Neoantigen Burden and Immune-Related Resistance Mechanisms
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    clincancerres.aacrjournals.org/content/27/15/4265
  106. Aug 2021
  107. www.sciencedirect.com www.sciencedirect.com
    Pro-inflammatory β cell small extracellular vesicles induce β cell failure through activation of the CXCL10/CXCR3 axis in diabetes
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    sciencedirect.com/science/article/pii/S2211124721010512
  108. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative Transcriptome Profiling Reveals Changes of microRNAs Response to Exercise in Rats with Neuropathic Pain
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    ncbi.nlm.nih.gov/pmc/articles/PMC8356008/
  109. www.hindawi.com www.hindawi.com
    Comparative Transcriptome Profiling Reveals Changes of microRNAs Response to Exercise in Rats with Neuropathic Pain
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    hindawi.com/journals/np/2021/5597139/
  110. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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