848 Matching Annotations
  1. Dec 2024
  2. www.biorxiv.org www.biorxiv.org
    Transcription factors associated with regulation of transcriptome in human thigh and calf muscles at baseline and after one week of disuse
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    biorxiv.org/content/10.1101/2024.12.10.627667v1
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    A cross-cohort study identifies potential oral microbial markers for esophageal squamous cell carcinoma
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    sciencedirect.com/science/article/pii/S2589004224026804
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Reciprocal inhibition of NOTCH and SOX2 shapes tumor cell plasticity and therapeutic escape in triple-negative breast cancer
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    pmc.ncbi.nlm.nih.gov/articles/PMC11628624/
  5. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The Capicua C1 Domain Is Required for Full Activity of the CIC::DUX4 Fusion Oncoprotein
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    pmc.ncbi.nlm.nih.gov/articles/PMC11626509/
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    Single chromatin fiber profiling and nucleosome position mapping in the human brain
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    sciencedirect.com/science/article/pii/S2667237524003011
  7. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Age-Related ECM Stiffness Mediates TRAIL Activation in Muscle Stem Cell Differentiation
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    onlinelibrary.wiley.com/doi/10.1002/adbi.202400334
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    DNA hypomethylation promotes UHRF1-and SUV39H1/H2-dependent crosstalk between H3K18ub and H3K9me3 to reinforce heterochromatin states
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    sciencedirect.com/science/article/pii/S1097276524009146
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    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
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    sciencedirect.com/science/article/pii/S0092867424012728
  10. Nov 2024
  11. 52.53.155.43 52.53.155.43
    cir-24-0324-html.html
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    52.53.155.43/d81834c4f435bac92597aa4fc554551b530ce2ba/cir-24-0324-html.html
  12. Oct 2024
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    RiboSnake – a user-friendly, robust, reproducible, multipurpose and documentation-extensive pipeline for 16S rRNA gene microbiome analysis
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    ncbi.nlm.nih.gov/pmc/articles/PMC11448241/
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An in vitro approach reveals molecular mechanisms underlying endocrine disruptor-induced epimutagenesis
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    ncbi.nlm.nih.gov/pmc/articles/PMC11449486/
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quiescence and aging of melanocyte stem cells and a novel association with PD-L1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11440800/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Clinical value of liquid biopsy in FGFR2 fusion-positive cholangiocarcinoma patients during targeted therapy
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    ncbi.nlm.nih.gov/pmc/articles/PMC11443220/
  17. www.biorxiv.org www.biorxiv.org
    MITF Targets in Gastrointestinal Stromal Tumors: Implications in Autophagy and Extracellular Vesicle Secretion
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    biorxiv.org/content/10.1101/2024.09.10.612253v1
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation
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    ncbi.nlm.nih.gov/pmc/articles/PMC11440432/
  19. aacrjournals.org aacrjournals.org
    Systematic Analysis of Intronic miRNAs Reveals Cooperativity within the Multicomponent FTX Locus to Promote Colon Cancer Development
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    aacrjournals.org/cancerres/article/81/5/1308/649526/Systematic-Analysis-of-Intronic-miRNAs-Reveals
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    YAP-Mediated Repression of HRK Regulates Tumor Growth, Therapy Response, and Survival Under Tumor Environmental Stress in Neuroblastoma
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    aacrjournals.org/cancerres/article/80/21/4741/645935/YAP-Mediated-Repression-of-HRK-Regulates-Tumor
  21. www.thelancet.com www.thelancet.com
    Profiling steroid hormone landscape of bladder cancer reveals depletion of intratumoural androgens to castration levels: a cross-sectional study
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    thelancet.com/journals/ebiom/article/PIIS2352-3964(24)00395-5/abstract
  22. Sep 2024
  23. www.biorxiv.org www.biorxiv.org
    Multidirectional effect of low-intensity electrical myostimulation on gene expression and phenotype in thigh and calf muscles after one week of disuse
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    biorxiv.org/content/10.1101/2024.09.18.613609v1
  24. www.sciencedirect.com www.sciencedirect.com
    Single-cell and bulk transcriptional profiling of mouse ovaries reveals novel genes and pathways associated with DNA damage response in oocytes
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    sciencedirect.com/science/article/pii/S0012160624002343
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The selected genes NR6A1, RSAD2-CMPK2, and COL3A1 contribute to body size variation in Meishan pigs through different patterns
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    ncbi.nlm.nih.gov/pmc/articles/PMC10548407/
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SJPedPanel: A pan-cancer gene panel for childhood malignancies to enhance cancer monitoring and early detection
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    ncbi.nlm.nih.gov/pmc/articles/PMC11393547/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome, mitochondrial genome and associated transcriptomes for the critically endangered swift parrot ( Lathamus discolor)
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    ncbi.nlm.nih.gov/pmc/articles/PMC11411239/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Proteogenomics of Prostate Cancer Radioresistance
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    ncbi.nlm.nih.gov/pmc/articles/PMC11411600/
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    Lysosome-related organelle integrity suppresses TIR-1 aggregation to restrain toxic propagation of p38 innate immunity
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    sciencedirect.com/science/article/pii/S2211124724010258
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    Untitled document
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    sciencedirect.com/science/article/pii/S2211124719304322
  31. www.biorxiv.org www.biorxiv.org
    Sex-specific chemosensory gene expression in the whitelined sphinx moth (Lepidoptera: Hyles lineata) suggests a role for odorant-binding proteins in host plant choice
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    biorxiv.org/content/10.1101/2024.09.04.611314v1
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    FEBS Press
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    febs.onlinelibrary.wiley.com/doi/10.1002/1878-0261.13725
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    Stretch triggers microtubule stabilization and MARCKS-dependent membrane incorporation in the shaft of embryonic axons
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    sciencedirect.com/science/article/pii/S0960982224011308
  34. faseb.onlinelibrary.wiley.com faseb.onlinelibrary.wiley.com
    Disruption of HSD17B12 in mouse hepatocytes leads to reduced body weight and defect in the lipid droplet expansion associated with microvesicular steatosis
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    faseb.onlinelibrary.wiley.com/doi/full/10.1096/fj.202400333RR
  35. www.biorxiv.org www.biorxiv.org
    A near-complete genome assembly of the bearded dragon Pogona vitticeps provides insights into the origin of Pogona sex chromosomes
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    biorxiv.org/content/10.1101/2024.09.05.611321v1
  36. www.sciencedirect.com www.sciencedirect.com
    Unraveling the phenotypic states of human innate-like T cells: Comparative insights with conventional T cells and mouse models
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    sciencedirect.com/science/article/pii/S2211124724010568
  37. www.sciencedirect.com www.sciencedirect.com
    Streamlined regulation of chloroplast development in the liverwort Marchantia polymorpha
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    sciencedirect.com/science/article/pii/S2211124724010477
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptomic analysis of Asparagus officinalis cultivars with varying levels of freezing tolerance over fall acclimation and spring deacclimation periods
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    ncbi.nlm.nih.gov/pmc/articles/PMC11361922/
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    Inhibitory co-receptor Lag3 supports Foxp3+ regulatory T cell function by restraining Myc-dependent metabolic programming
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    sciencedirect.com/science/article/pii/S1074761324004072
  40. Aug 2024
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterizing Relationships between T-cell Inflammation and Outcomes in Patients with High-Risk Neuroblastoma According to Mesenchymal and Adrenergic Signatures
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    ncbi.nlm.nih.gov/pmc/articles/PMC11350481/
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    p53R172H and p53R245W Hotspot Mutations Drive Distinct Transcriptomes in Mouse Mammary Tumors Through a Convergent Transcriptional Mediator
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    ncbi.nlm.nih.gov/pmc/articles/PMC11310746/
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome report: First reference genome of Vaccinium floribundum Kunth, an emblematic Andean species
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    ncbi.nlm.nih.gov/pmc/articles/PMC11304950/
  44. www.biorxiv.org www.biorxiv.org
    The multi-level effect of chlorpyrifos during clownfish metamorphosis
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    biorxiv.org/content/10.1101/2024.08.02.606305v1
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multiple approaches converge on three biological subtypes of meningioma and extract new insights from published studies
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    ncbi.nlm.nih.gov/pmc/articles/PMC11313601/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deciphering cancer genomes with GenomeSpy: a grammar-based visualization toolkit
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299109/
  47. academic.oup.com academic.oup.com
    Spermatogonial Type 3 Deiodinase Regulates Thyroid Hormone Target Genes in Developing Testicular Somatic Cells
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    academic.oup.com/endo/advance-article-abstract/doi/10.1210/en.2019-00259/5588376
  48. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Transcriptomic analysis of the hippocampus from six inbred strains of mice suggests a basis for sex‐specific susceptibility and severity of neurological disorders
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    onlinelibrary.wiley.com/doi/10.1002/cne.23989/full
  49. Jul 2024
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A clinical metagenomic study of biopsies from Mexican endophthalmitis patients reveals the presence of complex bacterial communities and a diversity of resistance genes
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    ncbi.nlm.nih.gov/pmc/articles/PMC11261729/
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    MYB-related transcription factors control chloroplast biogenesis
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    sciencedirect.com/science/article/pii/S009286742400713X
  52. www.science.org www.science.org
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
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    science.org/doi/10.1126/sciadv.adk1296
  53. www.sciencedirect.com www.sciencedirect.com
    BACH1 inhibits senescence, obesity, and short lifespan by ferroptotic FGF21 secretion
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    sciencedirect.com/science/article/pii/S2211124724007319
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Systems modeling of oncogenic G-protein and GPCR signaling reveals unexpected differences in downstream pathway activation
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    ncbi.nlm.nih.gov/pmc/articles/PMC11252164/
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    Protection from environmental enteric dysfunction and growth improvement in malnourished newborns by amplification of secretory IgA
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    sciencedirect.com/science/article/pii/S2666379124003525
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ALDH1A3-acetaldehyde metabolism potentiates transcriptional heterogeneity in melanoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC11290356/
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    gNOMO2: a comprehensive and modular pipeline for integrated multi-omics analyses of microbiomes
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    ncbi.nlm.nih.gov/pmc/articles/PMC11240238/
  58. www.biorxiv.org www.biorxiv.org
    PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
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    biorxiv.org/content/10.1101/2024.06.26.600753v2
  59. www.mdpi.com www.mdpi.com
    MMP-3 Knockout Induces Global Transcriptional Changes and Reduces Cerebral Infarction in Both Male and Female Models of Ischemic Stroke
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    mdpi.com/1422-0067/25/13/7383
  60. onlinelibrary.wiley.com onlinelibrary.wiley.com
    ABC Efflux Transporters and Solute Carriers in the Early Developing Brain of a Marsupial Monodelphis domestica (South American Gray Short-Tailed Opossum)
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    onlinelibrary.wiley.com/doi/full/10.1002/cne.25655
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    RNF185 control of COL3A1 expression limits prostate cancer migration and metastatic potential
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    ncbi.nlm.nih.gov/pmc/articles/PMC10841372/
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A nuclear architecture screen in Drosophila identifies Stonewall as a link between chromatin position at the nuclear periphery and germline stem cell fate
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    ncbi.nlm.nih.gov/pmc/articles/PMC11216176/
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The methyltransferases METTL7A and METTL7B confer resistance to thiol-based histone deacetylase inhibitors
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    ncbi.nlm.nih.gov/pmc/articles/PMC11223745/
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated re-analysis of transcriptomic and proteomic datasets reveals potential mechanisms for Zika viral-based oncolytic therapy in neuroblastoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC11187533/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11204300/
  66. Jun 2024
  67. febs.onlinelibrary.wiley.com febs.onlinelibrary.wiley.com
    FEBS Press
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    febs.onlinelibrary.wiley.com/doi/10.1002/1878-0261.13672
  68. link.springer.com link.springer.com
    Targeting the intestinal circadian clock by meal timing ameliorates gastrointestinal inflammation
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    link.springer.com/article/10.1038/s41423-024-01189-z
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chronic signaling TGFb zebrafish reporter identifies immune response in melanoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC11178360/
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptomic gene signatures measure satellite cell activity in muscular dystrophies
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    ncbi.nlm.nih.gov/pmc/articles/PMC11150970/
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptional response of the heart to vagus nerve stimulation
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    ncbi.nlm.nih.gov/pmc/articles/PMC7616044/
  72. www.sciencedirect.com www.sciencedirect.com
    Experience-dependent regulation of dopaminergic signaling in the somatosensory cortex
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    sciencedirect.com/science/article/pii/S0301008224000662
  73. May 2024
  74. 52.53.155.43 52.53.155.43
    Prenatal tuning of thalamic spontaneous activity patterns regulates somatosensory map resolution
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    52.53.155.43/a7dcd09b97130d36ebf5e681970d32cc5f19936b/2024.03.15.585193v1.full-html.html
  75. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Association between the skin microbiome and lichen striatus hypopigmentation: Cutibacterium acnes as a potential cause
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    onlinelibrary.wiley.com/doi/10.1111/jdv.19746
  76. 52.53.155.43 52.53.155.43
    mcr-23-0295-html.html
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  77. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pharmacologic Targeting of Histone H3K27 Acetylation/BRD4-dependent Induction of ALDH1A3 for Early-phase Drug Tolerance of Gastric Cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC11104289/
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo transcriptome assembly and genome annotation of the fat-tailed dunnart (Sminthopsis crassicaudata)
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    ncbi.nlm.nih.gov/pmc/articles/PMC11091235/
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    SARS-CoV-2 infection exacerbates the cellular pathology of Parkinson’s disease in human dopaminergic neurons and a mouse model
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    sciencedirect.com/science/article/pii/S2666379124002623
  80. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The Janus kinase 1 is critical for pancreatic cancer initiation and progression
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    pmc.ncbi.nlm.nih.gov/articles/PMC11194014/
  81. 52.53.155.43 52.53.155.43
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
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    52.53.155.43/cd1f9c7be80d56e211920ba04afd056c82fa391f/2024.02.19.579948.full-html.html
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    The MYCN oncoprotein is an RNA-binding accessory factor of the nuclear exosome targeting complex
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    sciencedirect.com/science/article/pii/S1097276524002855
  83. www.mdpi.com www.mdpi.com
    Dissecting Genetic Mechanisms of Differential Locomotion, Depression, and Allodynia after Spinal Cord Injury in Three Mouse Strains
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    mdpi.com/2073-4409/13/9/759
  84. www.microbiologyresearch.org www.microbiologyresearch.org
    Psychrobacter raelei sp. nov., isolated from a dog with peritonitis
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    microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006353
  85. www.cell.com www.cell.com
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2
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    cell.com/cell-genomics/fulltext/S2666-979X(24)00122-8
  86. Apr 2024
  87. www.microbiologyresearch.org www.microbiologyresearch.org
    Bdellovibrio svalbardensis sp. nov., a newly described predator isolated from Svalbard, Norway
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    microbiologyresearch.org/content/journal/ijsem/10.1099/ijsem.0.006248
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    ER-associated degradation adapter Sel1L is required for CD8+ T cell function and memory formation following acute viral infection
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    sciencedirect.com/science/article/pii/S2211124724004844
  89. academic.oup.com academic.oup.com
    Korea4K: whole genome sequences of 4,157 Koreans with 107 phenotypes derived from extensive health check-ups
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giae014/7646332
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    XTX301, a Tumor-Activated Interleukin-12 Has the Potential to Widen the Therapeutic Index of IL12 Treatment for Solid Tumors as Evidenced by Preclinical Studies
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    ncbi.nlm.nih.gov/pmc/articles/PMC10993987/
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    Class I HDAC inhibitors enhance antitumor efficacy and persistence of CAR-T cells by activation of the Wnt pathway
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    sciencedirect.com/science/article/pii/S2211124724003930
  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Reprogramming the Intrahepatic Cholangiocarcinoma Immune Microenvironment by Chemotherapy and CTLA-4 Blockade Enhances Anti–PD-1 Therapy
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  169. Aug 2023
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  181. Jul 2023
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    Title: TET1 Facilitates Specification of Early Human Lineages including Germ Cells
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