414 Matching Annotations
  1. May 2023
  2. www-sciencedirect-com.ezproxy.auckland.ac.nz www-sciencedirect-com.ezproxy.auckland.ac.nz
    Bovine blastocyst-like structures derived from stem cell cultures
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    www-sciencedirect-com.ezproxy.auckland.ac.nz/science/article/pii/S1934590923001212
  3. Apr 2023
  4. www.sciencedirect.com www.sciencedirect.com
    Large-scale differentiation of iPSC-derived motor neurons from ALS and control subjects
    1
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    sciencedirect.com/science/article/pii/S089662732300034X
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10087013/
  6. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
  7. Mar 2023
  8. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Study on tillering stage cold tolerant response in overwintering cultivated rice via comparative transcriptomic
    1
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    onlinelibrary.wiley.com/doi/10.1002/fes3.450
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Atria: an ultra-fast and accurate trimmer for adapter and quality trimming
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038132/
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inactivation of interleukin-30 in colon cancer stem cells via CRISPR/Cas9 genome editing inhibits their oncogenicity and improves host survival
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10030651/
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the deep-sea coral Lophelia pertusa
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10022433/
  13. www.sciencedirect.com www.sciencedirect.com
    Nicotinamide riboside supplementation is not associated with altered methylation homeostasis in Parkinson’s disease
    1
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    sciencedirect.com/science/article/pii/S2589004223003553
  14. www.sciencedirect.com www.sciencedirect.com
    Transcriptional control of nucleus accumbens neuronal excitability by retinoid X receptor alpha tunes sensitivity to drug rewards
    1
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    sciencedirect.com/science/article/pii/S0896627323001174
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quality parameters for RNA preparations from biopsies of ulcerated human skin
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9984735/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exogenous abscisic acid prolongs the dormancy of recalcitrant seed of Panax notoginseng
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9971733/
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome for the critically endangered woylie, Bettongia penicillata ogilbyi
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650285/
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the humpback puffer, Tetraodon palembangensis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632004/
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  20. Feb 2023
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Impaired iron recycling from erythrocytes is an early hallmark of aging
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9931393/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Actin-dependent astrocytic infiltration is a key step for axon defasciculation during remodeling
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9989824/
  23. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
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    sciencedirect.com/science/article/pii/S0888754323000265
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome and the identification of sex chromosomes in Uloborus diversus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9912274/
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Expansion and loss of sperm nuclear basic protein genes in Drosophila correspond with genetic conflicts between sex chromosomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9917458/
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An updated version of the Madagascar periwinkle genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9902796/
  27. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Hippocampal RNA sequencing in mice selectively bred for high and low activity
    1
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    onlinelibrary.wiley.com/doi/10.1111/gbb.12832
  28. Jan 2023
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9827110/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ANGPTL4-Mediated Promotion of Glycolysis Facilitates the Colonization of Fusobacterium nucleatum in Colorectal Cancer
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9397643/
  31. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
    1
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    onlinelibrary.wiley.com/doi/10.1002/ps.7319
  32. Dec 2022
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    annotate_my_genomes: an easy-to-use pipeline to improve genome annotation and uncover neglected genes by hybrid RNA sequencing
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9724561/
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Hedgehog regulation of epithelial cell state and morphogenesis in the larynx
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9718526/
  36. Nov 2022
  37. www.sciencedirect.com www.sciencedirect.com
    Essential role of MESP1-RING1A complex in cardiac differentiation
    1
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    sciencedirect.com/science/article/pii/S1534580722007614
  38. academic.oup.com academic.oup.com
    The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac109/6827246
  39. f1000research.com f1000research.com
    F1000Research Article: Inference of a genome-wide protein-coding gene set of the inshore hagfish <i>Eptatretus burgeri</i>.
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    f1000research.com/articles/11-1270
  40. academic.oup.com academic.oup.com
    Selection signatures in goats reveal a novel deletion mutant underlying cashmere yield and diameter
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac107/6795292
  41. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac106/6780308
  42. Oct 2022
  43. aacrjournals.org aacrjournals.org
    CircIPO7 Promotes Nasopharyngeal Carcinoma Metastasis and Cisplatin Chemoresistance by Facilitating YBX1 Nuclear Localization
    1
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    aacrjournals.org/clincancerres/article/28/20/4521/709577/CircIPO7-Promotes-Nasopharyngeal-Carcinoma
  44. www.sciencedirect.com www.sciencedirect.com
    Circadian transcriptional pathway atlas highlights a proteasome switch in intermittent fasting
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    sciencedirect.com/science/article/pii/S2211124722014036
  45. wellcomeopenresearch.org wellcomeopenresearch.org
    Quality parameters for RNA preparations from biopsies of ulcerated human skin
    1
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    wellcomeopenresearch.org/articles/7-249
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multiomic characterization and drug testing establish circulating tumor cells as an ex vivo tool for personalized medicine
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9529671/
  47. 52.53.155.43 52.53.155.43
    1-s2.0-S2589004222013530-main-html.html
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    52.53.155.43/c48193a37113c2957d0d524999944a402836d9cc/1-s2.0-S2589004222013530-main-html.html
  48. Sep 2022
  49. f1000research.com f1000research.com
    Circadian signatures of anterior hypothalamus in time-restricted feeding
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    f1000research.com/articles/11-1087
  50. academic.oup.com academic.oup.com
    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac085/6700067
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of key endosymbiont genes may facilitate early host control of the chromatophore in Paulinella
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9450145/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8904296/
  53. Aug 2022
  54. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
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    sciencedirect.com/science/article/pii/S2211124722010531
  55. Jul 2022
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterization of the Genomic and Immunological Diversity of Malignant Brain Tumors Through Multi-Sector Analysis
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    ncbi.nlm.nih.gov/pmc/articles/PMC9296070/
  58. www.researchsquare.com www.researchsquare.com
    Home
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    researchsquare.com/
  59. www.sciencedirect.com www.sciencedirect.com
    Spatiotemporal genomic analysis reveals distinct molecular features in recurrent stage I non-small cell lung cancers
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    sciencedirect.com/science/article/pii/S2211124722008415
  60. www.sciencedirect.com www.sciencedirect.com
    Group 3 innate lymphocytes make a distinct contribution to Type 17 immunity in bladder defence
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    sciencedirect.com/science/article/pii/S2589004222009324
  61. academic.oup.com academic.oup.com
    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac059/6619297
  62. academic.oup.com academic.oup.com
    Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac057/6619298
  63. www.sciencedirect.com www.sciencedirect.com
    Bacteria reduce flagellin synthesis to evade microglia-astrocyte-driven immunity in the brain
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    sciencedirect.com/science/article/pii/S2211124722008270
  64. link.springer.com link.springer.com
    Single-Cell RNA Sequencing Analysis Using Fluidigm C1 Platform for Characterization of Heterogeneous Transcriptomes
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    link.springer.com/protocol/10.1007/978-1-0716-2376-3_19
  65. Jun 2022
  66. aacrjournals.org aacrjournals.org
    Quantification of neoantigen-mediated immunoediting in cancer evolution
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    aacrjournals.org/cancerres/article/82/12/2226/699353/Quantification-of-Neoantigen-Mediated
  67. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac042/6608506
  68. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Integrative metabolomics and transcriptomics analysis reveals novel therapeutic vulnerabilities in lung cancer
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    onlinelibrary.wiley.com/doi/10.1002/cam4.4933
  69. www.sciencedirect.com www.sciencedirect.com
    EED is required for mouse primordial germ cell differentiation in the embryonic gonad
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    sciencedirect.com/science/article/pii/S1534580722003690
  70. www.sciencedirect.com www.sciencedirect.com
    Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine
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    sciencedirect.com/science/article/pii/S109727652200483X
  71. www.nature.com www.nature.com
    Targeting LIPA independent of its lipase activity is a therapeutic strategy in solid tumors via induction of endoplasmic reticulum stress
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    nature.com/articles/s43018-022-00389-8
  72. academic.oup.com academic.oup.com
    Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac045/6593429
  73. May 2022
  74. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
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    f1000research.com/articles/11-530
  75. www.sciencedirect.com www.sciencedirect.com
    Sexually dimorphic RNA helicases DDX3X and DDX3Y differentially regulate RNA metabolism through phase separation
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    sciencedirect.com/science/article/pii/S1097276522003859
  76. www.sciencedirect.com www.sciencedirect.com
    Cytoplasmic proteotoxicity regulates HRI-dependent phosphorylation of eIF2α via the Hsp70-Bag3 module
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    sciencedirect.com/science/article/pii/S2589004222005521
  77. 52.53.155.43 52.53.155.43
    Lessons learned about the biology and genomics of Diaphorina citri infection with “Candidatus Liberibacter asiaticus” by integrating new and archived organ-specific transcriptome data
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    52.53.155.43/d33d93644b6f555490c97ad70ff221cb688ba025/out-html.html
  78. Apr 2022
  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    TNF Signaling Acts Downstream of MiR-322/-503 in Regulating DM1 Myogenesis
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    ncbi.nlm.nih.gov/pmc/articles/PMC9021394/
  80. www.sciencedirect.com www.sciencedirect.com
    An adult-stage transcriptional program for survival of serotonergic connectivity
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    sciencedirect.com/science/article/pii/S2211124722004727
  81. academic.oup.com academic.oup.com
    A high-quality assembled genome and its comparative analysis decode the adaptive molecular mechanism of the number one Chinese cotton variety CRI-12
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac019/6562534
  82. faseb.onlinelibrary.wiley.com faseb.onlinelibrary.wiley.com
    Maintenance of glutamine synthetase expression alleviates endotoxin-induced sepsis via alpha-ketoglutarate-mediated demethylation
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    faseb.onlinelibrary.wiley.com/doi/10.1096/fj.202200059R
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Presence of H3K4me3 on Paternally Expressed Genes of the Paternal Genome From Sperm to Implantation
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    ncbi.nlm.nih.gov/pmc/articles/PMC8960379/
  84. Mar 2022
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Distribution and regulatory roles of oxidized 5-methylcytosines in DNA and RNA of the basidiomycete fungi Laccaria bicolor and Coprinopsis cinerea
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    ncbi.nlm.nih.gov/pmc/articles/PMC8889193/
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
    1
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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC6030905/
  88. www.sciencedirect.com www.sciencedirect.com
    Metabolic incorporation of electron-rich ribonucleosides enhances APEX-seq for profiling spatially restricted nascent transcriptome
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    sciencedirect.com/science/article/pii/S2451945622000861
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nonsense-mediated RNA decay is a unique vulnerability of cancer cells harboring SF3B1 or U2AF1 mutations
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8416940/
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome of the ramshorn snail Biomphalaria straminea—an obligate intermediate host of schistosomiasis
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    ncbi.nlm.nih.gov/pmc/articles/PMC8848322/
  91. elifesciences.org elifesciences.org
    Allele-specific gene expression can underlie altered transcript abundance in zebrafish mutants
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    elifesciences.org/articles/72825
  92. Feb 2022
  93. www.nature.com www.nature.com
    Global mapping of RNA G-quadruplexes (G4-RNAs) using G4RP-seq
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    nature.com/articles/s41596-021-00671-6
  94. Jan 2022
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage map
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    ncbi.nlm.nih.gov/pmc/articles/PMC8756199/
  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nuclear NAD+-biosynthetic enzyme NMNAT1 facilitates development and early survival of retinal neurons
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    ncbi.nlm.nih.gov/pmc/articles/PMC8754432/
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
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    ncbi.nlm.nih.gov/pmc/articles/PMC8744892/
  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8709578/
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    AP-2α Regulates S-phase and is a Marker for Sensitivity to PI3K-inhibitor Buparlisib in Colon Cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC8254761/
  100. Dec 2021
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)
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    ncbi.nlm.nih.gov/pmc/articles/PMC8685854/
  102. www.sciencedirect.com www.sciencedirect.com
    Relayed signaling between mesenchymal progenitors and muscle stem cells ensures adaptive stem cell response to increased mechanical load
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  103. Nov 2021
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  168. Jan 2021
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  173. Dec 2020
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  177. Sep 2020
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  199. Jan 2020
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