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May 2024
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TDP1 mutation causing SCAN1 neurodegenerative syndrome hampers the repair of transcriptional DNA double-strand breaks

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Non-canonical substrate recognition by the human WDR26-CTLH E3 ligase regulates prodrug metabolism

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  DOI: 10.1016/j.molcel.2024.04.014
  
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Conserved and divergent DNA recognition specificities and functions of R2 retrotransposon N-terminal domains

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ncbi.nlm.nih.gov/pmc/articles/PMC11204384/
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Whi5 hypo- and hyper-phosphorylation dynamics control cell-cycle entry and progression

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  DOI: 10.1016/j.cub.2024.04.052
  
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sciencedirect.com/science/article/pii/S0960982224005268
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EFA6A, an Exchange Factor for Arf6, Regulates NGF-Dependent TrkA Recycling From Early Endosomes and Neurite Outgrowth in PC12 Cells

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  DOI: 10.1111/tra.12936
  
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onlinelibrary.wiley.com/doi/10.1111/tra.12936
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The deubiquitylating enzyme Fat Facets modulates Fat signalling and regulates tissue growth

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  DOI: 10.1101/2024.01.27.577535
  
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biorxiv.org/content/10.1101/2024.01.27.577535v2
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Discovery of SOCS7 as a versatile E3 ligase for protein-based degraders

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cell.com/iscience/abstract/S2589-0042(24)01024-1
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Synchronizing Drosophila larvae with the salivary gland reporter Sgs3-GFP for discovery of phenotypes in the late third instar stage.

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sciencedirect.com/science/article/pii/S0012160624001118
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p37 regulates VCP/p97 shuttling and functions in the nucleus and cytosol

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  DOI: 10.1126/sciadv.adl6082
  
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science.org/doi/10.1126/sciadv.adl6082
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The Human Intermediate Prolactin Receptor I-tail Contributes Breast Oncogenesis by Targeting Ras/MAPK Pathway

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  DOI: 10.1210/endocr/bqae039
  
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dx.doi.org/10.1210/endocr/bqae039
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bqae039-html.html

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52.53.155.43/ab567994747ba987c62f3a62774a1442bfaf3557/bqae039 (1)-html.html
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Ubiquitin-mediated regulation of APE2 protein abundance

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sciencedirect.com/science/article/pii/S0021925824018386
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p37 regulates VCP/p97 shuttling and functions in the nucleus and cytosol

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  DOI: 10.1126/sciadv.adl6082
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11068011/
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Analysis of tumor-associated AXIN1 missense mutations identifies variants that activate β-catenin signaling

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  DOI: 10.1158/0008-5472.CAN-23-2268
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11063763/
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CDK1-PP2A-B55 interplay ensures cell cycle oscillation via Apc1-loop300

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  DOI: 10.1016/j.celrep.2024.114155
  
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cell.com/cell-reports/abstract/S2211-1247(24)00483-2
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Spatiotemporal proteomic profiling of cellular responses to NLRP3 agonists

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ncbi.nlm.nih.gov/pmc/articles/PMC11042255/
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The Mediator Med23 controls a transcriptional switch for muscle stem cell proliferation and differentiation in muscle regeneration

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  DOI: 10.1016/j.celrep.2024.114177
  
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A dynamin superfamily-like pseudoenzyme coordinates with MICOS to promote cristae architecture

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  DOI: 10.1016/j.cub.2024.04.028
  
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Apr 2024
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A critical suppression feedback loop determines soybean photoperiod sensitivity

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SUMOylation controls Hu antigen R posttranscriptional activity in liver cancer

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ncbi.nlm.nih.gov/pmc/articles/PMC11025316/
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HDAC10 inhibition represses melanoma cell growth and BRAF inhibitor resistance via upregulating SPARC expression

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ncbi.nlm.nih.gov/pmc/articles/PMC11034028/
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Protocol for efficient CRISPR-Cas9-mediated fluorescent tag knockin in hard-to-transfect erythroid cell lines

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sciencedirect.com/science/article/pii/S2666166724001813
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ISGylation by HERCs facilitates STING activation

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  DOI: 10.1016/j.celrep.2024.114135
  
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The chromatin remodeler CHD4 sustains Ewing Sarcoma cell survival by controlling global chromatin architecture

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  DOI: 10.1158/0008-5472.CAN-22-3950
  
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aacrjournals.org/cancerres/article/84/2/241/733111/The-Chromatin-Remodeler-CHD4-Sustains-Ewing
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New Loss-of-Function Mutations in PCSK9 Reduce Plasma LDL Cholesterol

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ahajournals.org/doi/10.1161/ATVBAHA.122.318839
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Targeting high circDNA2v levels in colorectal cancer induces cellular senescence and elicits an anti-tumor secretome

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Detection of newly synthesized RNA reveals transcriptional reprogramming during ZGA and a role of Obox3 in totipotency acquisition

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  DOI: 10.1016/j.celrep.2024.114118
  
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Accumulation of APP C-terminal fragments causes endolysosomal dysfunction through the dysregulation of late endosome to lysosome-ER contact sites

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Accumbens Nitrergic Interneurons Drive the Cell Type-Specific Synaptic Plasticity Required for Cue-Induced Cocaine Seeking

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  DOI: 10.1101/2024.04.05.587610
  
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SWI/SNF complex-mediated chromatin remodelling in Candida glabrata promotes immune evasion

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TRPA5 encodes a thermosensitive ankyrin ion channel receptor in a triatomine insect

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  DOI: 10.1016/j.isci.2024.109541
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10993193/
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Neuronal activity rapidly reprograms dendritic translation via eIF4G2:uORF binding

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  DOI: 10.1038/s41593-024-01615-5
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11088998/
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Female-specific dysfunction of sensory neocortical circuits in a mouse model of autism mediated by mGluR5 and estrogen receptor α

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ncbi.nlm.nih.gov/pmc/articles/PMC11112681/
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14-3-3 binding motif phosphorylation disrupts Hdac4-organized condensates to stimulate cardiac reprogramming

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Small RNAs direct attack and defense mechanisms in a quorum sensing phage and its host

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DDX21 mediates co-transcriptional RNA m6A modification to promote transcription termination and genome stability

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The UBE2F-CRL5ASB11-DIRAS2 axis is an oncogene and tumor suppressor cascade in pancreatic cancer cells

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Genotype-Phenotype Correlations in Thirty Japanese Patients with Congenital Hypothyroidism Attributable to TG Defects

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Targeting DNMT3A-mediated oxidative phosphorylation to overcome ibrutinib resistance in mantle cell lymphoma

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S-nitrosylation-triggered unfolded protein response maintains hematopoietic progenitors in Drosophila

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Matrilin-3 supports neuroprotection in ischemic stroke by suppressing astrocyte-mediated neuroinflammation

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Hippo-signaling-controlled MHC class I antigen processing and presentation pathway potentiates antitumor immunity

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Recombinant cyclin B-Cdk1-Suc1 capable of multi-site mitotic phosphorylation in vitro

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Excitotoxic glutamate levels cause the secretion of resident endoplasmic reticulum proteins

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The deubiquitinase Otud7b suppresses cone photoreceptor degeneration in mouse models of retinal degenerative diseases

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FAM86A methylation of eEF2 links mRNA translation elongation to tumorigenesis

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Cytosolic pH is a direct nexus in linking environmental cues with insulin processing and secretion in pancreatic β cells

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SUMOylation controls Hu antigen R posttranscriptional activity in liver cancer

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Inter-organ steroid hormone signaling promotes myoblast fusion via direct transcriptional regulation of a single key effector gene

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Abcg2a is the functional homolog of human ABCG2 expressed at the zebrafish blood–brain barrier

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The acetylase activity of Cdu1 regulates bacterial exit from infected cells by protecting Chlamydia effectors from degradation

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Spatial resolution of HIV-1 post-entry steps in resting CD4 T cells

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Interaction between host G3BP and viral nucleocapsid protein regulates SARS-CoV-2 replication and pathogenicity

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A gut-derived hormone regulates cholesterol metabolism

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Metabolic reprogramming of cancer cells by JMJD6-mediated pre-mRNA splicing associated with therapeutic response to splicing inhibitor

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The BMAL1/HIF2A heterodimer modulates circadian variations of myocardial injury

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Bile acids modified by the intestinal microbiota promote colorectal cancer growth by suppressing CD8+ T cell effector functions

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Pla2g12b drives expansion of triglyceride-rich lipoproteins

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The dispensability of 14-3-3 proteins for the regulation of human cardiac sodium channel Nav1.5

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JNEUROSCI.2031-23.2024.full-html.html

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Acetyl-CoA production by Mediator-bound 2-ketoacid dehydrogenases boosts de novo histone acetylation and is regulated by nitric oxide

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CDK-independent role of D-type cyclins in regulating DNA mismatch repair

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ApoE maintains neuronal integrity via miRNA and H3K27me3-mediated repression.

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Alternative splicing decouples local from global PRC2 activity

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ALK upregulates POSTN and WNT signaling to drive neuroblastoma

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Type I gamma phosphatidylinositol phosphate 5-kinase i5 controls cell sensitivity to interferon

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Securin acetylation prevents precocious separase activation and premature sister chromatid separation

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Identification and characterization of a potent and selective HUNK inhibitor for treatment of HER2+ breast cancer

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MOF-mediated acetylation of UHRF1 enhances UHRF1 E3 ligase activity to facilitate DNA methylation maintenance

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SARS-CoV-2 targets ribosomal RNA biogenesis

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Structure-based design of non-hypertrophic apelin receptor modulator

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Non-canonical isoforms of the mRNA polyadenylation factor WDR33 regulate STING-mediated immune responses

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HERC5-catalyzed ISGylation potentiates cGAS-mediated innate immunity

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PRMT1 acts as a suppressor of MHC-I and anti-tumor immunity

1
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NEMF-mediated Listerin-independent mitochondrial translational surveillance by E3 ligase Pirh2 and mitochondrial protease ClpXP

1
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AURKA enhances the glycolysis and development of ovarian endometriosis through ERβ

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UDP-glucose dehydrogenase supports autophagy-deficient PDAC growth via increasing hyaluronic acid biosynthesis

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241-html.html

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Poly(ADP-ribosyl)ation of TIMELESS limits DNA replication stress and promotes stalled fork protection

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Protein-folding chaperones predict structure-function relationships and cancer risk in BRCA1 mutation carriers

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Cell-type-specific expression of tRNAs in the brain regulates cellular homeostasis

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  DOI: 10.1016/j.neuron.2024.01.028
  
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Nuclear Translocation of Cleaved PCDH9 Impairs Gastric Cancer Metastasis by Downregulating CDH2 Expression

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Familial Alzheimer mutations stabilize synaptotoxic γ-secretase-substrate complexes

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Dietary elaidic acid boosts tumoral antigen presentation and cancer immunity via ACSL5

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Human YKT6 forms priming complex with STX17 and SNAP29 to facilitate autophagosome-lysosome fusion

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SERTAD1 initiates NLRP3-mediated inflammasome activation through restricting NLRP3 polyubiquitination

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A zebrafish model for C9orf72 ALS reveals RNA toxicity as a pathogenic mechanism

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AEP-cleaved DDX3X induces alternative RNA splicing events to mediate cancer cell adaptation in harsh microenvironments

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HDAC10 blockade upregulates SPARC expression thereby repressing melanoma cell growth and BRAF inhibitor resistance

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  DOI: 10.1101/2023.12.05.570182
  
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Palmitoylation alters LDHA activity and pancreatic cancer response to chemotherapy

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  DOI: 10.1016/j.canlet.2024.216696
  
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Mieap forms membrane-less organelles involved in cardiolipin metabolism

1
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Pharmacological inhibition of neddylation impairs long interspersed element 1 retrotransposition

1
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Zn2+-dependent functional switching of ERp18, an ER-resident thioredoxin-like protein

1
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Cullin-RING E3 ubiquitin ligase 4 regulates neurite morphogenesis during neurodevelopment

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Protocol for detecting RBM33-binding sites in HEK293T cells using PAR-CLIP-seq

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Lysosomal stress drives the release of pathogenic α-synuclein from macrophage lineage cells via the LRRK2-Rab10 pathway

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Histone methylation readers MRG1/2 interact with PIF4 to promote thermomorphogenesis in Arabidopsis

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Cellular Targets and Lysine Selectivity of the HERC5 ISG15 Ligase

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Cooperation between PRMT1 and PRMT6 drives lung cancer health disparities among Black/African American men

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Dual roles of CCDC102A in governing centrosome duplication and cohesion

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Two-step evolution of HIV-1 budding system leading to pandemic in the human population

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PUF partner interactions at a conserved interface shape the RNA-binding landscape and cell fate in Caenorhabditis elegans

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CAG repeat expansions create splicing acceptor sites and produce aberrant repeat-containing RNAs

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Loop-extruding Smc5/6 organizes transcription-induced positive DNA supercoils

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SMARCAL1 is a dual regulator of innate immune signaling and PD-L1 expression that promotes tumor immune evasion

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Comparative analyses of the Smith−Magenis syndrome protein RAI1 in mice and common marmoset monkeys

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p53-responsive CMBL reprograms glucose metabolism and suppresses cancer development by destabilizing phosphofructokinase PFKP

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Cholinergic signaling via muscarinic M1 receptor confers resistance to docetaxel in prostate cancer

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DNA-guided transcription factor cooperativity shapes face and limb mesenchyme

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Maintaining Toll signaling in Drosophila brain is required to sustain autophagy for dopamine neuron survival

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Conformational transitions and activation of the adhesion receptor CD97

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The mitochondrial genome-encoded peptide MOTS-c interacts with Bcl-2 to alleviate nonalcoholic steatohepatitis progression

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A mitophagy sensor PPTC7 controls BNIP3 and NIX degradation to regulate mitochondrial mass

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Structural evidence for protein-protein interaction between the non-canonical methyl-CpG-binding domain of SETDB proteins and C11orf46

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Structural basis for competitive binding of productive and degradative co-transcriptional effectors to the nuclear cap-binding complex

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Chronic hypoxia stabilizes 3βHSD1 via autophagy suppression

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METTL17 is an Fe-S cluster checkpoint for mitochondrial translation

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COP9 signalosome-mediated deneddylation of CULLIN1 is necessary for SCFEBF1 assembly in Arabidopsis thaliana

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Oxidative guanine base damage plays a dual role in regulating productive ALT-associated homology-directed repair

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Pirin Inhibits FAS-Mediated Apoptosis to Support Colorectal Cancer Survival

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A mitophagy sensor PPTC7 controls BNIP3 and NIX degradation to regulate mitochondrial mass

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Metabolic regulation of homologous recombination repair by MRE11 lactylation

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A helicase-independent role of DHX15 promotes MYC stability and acute leukemia cell survival

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The Crucial Role of Single-Stranded DNA Binding in Enhancing Sensitivity to DNA-Damaging Agents for Schlafen 11 and Schlafen 13

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ER chaperones use a protein folding and quality control glyco-code

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An enzyme that selectively S-nitrosylates proteins to regulate insulin signaling

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Multisite phosphorylation dictates selective E2-E3 pairing as revealed by Ubc8/UBE2H-GID/CTLH assemblies

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SON is an essential m6A target for hematopoietic stem cell fate

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Systematic analysis of alternative exon-dependent interactome remodeling reveals multitasking functions of gene regulatory factors

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Synonymous codon usage regulates translation initiation

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ZDHHC5-mediated NLRP3 palmitoylation promotes NLRP3-NEK7 interaction and inflammasome activation

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Astrocyte growth is driven by the Tre1/S1pr1 phospholipid-binding G protein-coupled receptor

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BACH1 changes microglial metabolism and affects astrogenesis during mouse brain development

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Ubiquiton—An inducible, linkage-specific polyubiquitylation tool

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Genome-wide screen reveals Rab12 GTPase as a critical activator of Parkinson’s disease-linked LRRK2 kinase

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ADAMTS-4 enhances oligodendrocyte differentiation and remyelination by cleaving NG2 proteoglycan and attenuating PDGFRα signaling

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Overexpression of ORMDL3 confers sexual dimorphism in diet-induced non-alcoholic steatohepatitis

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Kinetochore stretching-mediated rapid silencing of the spindle-assembly checkpoint required for failsafe chromosome segregation

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TOR inactivation triggers heterochromatin formation in rDNA during glucose starvation

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Exploiting the endogenous yeast nuclear proteome to identify short linear motifs in vivo

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A direct interaction between CPF and RNA Pol II links RNA 3′ end processing to transcription

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Debugging and consolidating multiple synthetic chromosomes reveals combinatorial genetic interactions

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Small proteins modulate ion-channel-like ACD6 to regulate immunity in Arabidopsis thaliana

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Unbiased interrogation of functional lysine residues in human proteome

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An atypical GABARAP binding module drives the pro-autophagic potential of the AML-associated NPM1c variant

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Differences in syncytia formation by SARS-CoV-2 variants modify host chromatin accessibility and cellular senescence via TP53

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Targeting PRMT1-mediated SRSF1 methylation to suppress oncogenic exon inclusion events and breast tumorigenesis

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hnRNPA1 SUMOylation promotes cold hypersensitivity in chronic inflammatory pain by stabilizing TRPA1 mRNA

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Consequences of a telomerase-related fitness defect and chromosome substitution technology in yeast synIX strains

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CLMP is a tumor suppressor that determines all-trans retinoic acid response in colorectal cancer

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Skeletal muscle TFEB signaling promotes central nervous system function and reduces neuroinflammation during aging and neurodegenerative disease

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Inhibiting G6PD by quercetin promotes degradation of EGFR T790M mutation

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Structural and signaling mechanisms of TAAR1 enabled preferential agonist design

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Determining the structure of protein-bound ceramides, essential lipids for skin barrier function

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The bone transcription factor Osterix controls extracellular matrix- and node of Ranvier-related gene expression in oligodendrocytes

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Autophagy-mediated control of ribosome homeostasis in oncogene-induced senescence

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mvad090-html.html

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Repression of CENP-A assembly in metaphase requires HJURP phosphorylation and inhibition by M18BP1

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The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation

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Gadd45β is critical for regulation of type I interferon signaling by facilitating G3BP-mediated stress granule formation

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V-ATPase recruitment to ER exit sites switches COPII-mediated transport to lysosomal degradation

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Blue light receptor CRY1 regulates HSFA1d nuclear localization to promote plant thermotolerance

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s11684-022-0959-5 (1)-html.html

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Hepatic conversion of acetyl-CoA to acetate plays crucial roles in energy stress

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MiniBAR/GARRE1 is a dual Rac and Rab effector required for ciliogenesis

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Lactate activates the mitochondrial electron transport chain independently of its metabolism

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  DOI: 10.1016/j.molcel.2023.09.034
  
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PRMT5 mediates FoxO1 methylation and subcellular localization to regulate lipophagy in myogenic progenitors

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  DOI: 10.1016/j.celrep.2023.113329
  
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Dual agonistic and antagonistic roles of ZC3H18 provide for co-activation of distinct nuclear RNA decay pathways

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  DOI: 10.1016/j.celrep.2023.113325
  
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Tyrosine catabolism enhances genotoxic chemotherapy by suppressing translesion DNA synthesis in epithelial ovarian cancer

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PAICS ubiquitination recruits UBAP2 to trigger phase separation for purinosome assembly

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The histone chaperone ANP32B regulates chromatin incorporation of the atypical human histone variant macroH2A

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Mouse models of human CNTNAP1-associated congenital hypomyelinating neuropathy and genetic restoration of murine neurological deficits

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