985 Matching Annotations
  1. Mar 2023
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first Antechinus reference genome provides a resource for investigating the genetic basis of semelparity and age-related neuropathologies
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631953/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A draft genome assembly of the eastern banjo frog Limnodynastes dumerilii dumerilii (Anura: Limnodynastidae)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632003/
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read assemblies reveal structural diversity in genomes of organelles – an example with Acacia pycnantha
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650277/
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Optimizing experimental design for genome sequencing and assembly with Oxford Nanopore Technologies
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650304/
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of a giant (trevally): Caranx ignobilis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694125/
  11. Feb 2023
  12. link.springer.com link.springer.com
    Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson’s disease
    1
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    link.springer.com/article/10.1007/s00702-023-02604-x
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  14. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
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    sciencedirect.com/science/article/pii/S0888754323000265
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of PBRM1 alters promoter histone modifications and activates ALDH1A1 to drive renal cell carcinoma
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9357026/
  16. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  17. 52.53.155.43 52.53.155.43
    Transcription factor HNF1β controls a transcriptional network regulating kidney cell structure and tight junction integrity
    1
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    52.53.155.43/030fdb0084c6620549dc8628e91b75020cfa4ad3/ajprenal.00199.2022-html.html
  18. academic.oup.com academic.oup.com
    Expanded MutaT7 toolkit efficiently and simultaneously accesses all possible transition mutations in bacteria
    1
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    academic.oup.com/nar/advance-article/doi/10.1093/nar/gkad003/7009119
  19. Jan 2023
  20. www.nature.com www.nature.com
    A chromosome-level genome assembly of Plantago ovata
    1
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    nature.com/articles/s41598-022-25078-5
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome Reporting for Healthy Populations—Pipeline for Genomic Screening from the GENCOV COVID‐19 Study
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9874607/
  22. www.sciencedirect.com www.sciencedirect.com
    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
    1
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    sciencedirect.com/science/article/pii/S2666379123000058
  23. www.sciencedirect.com www.sciencedirect.com
    Centromeres as universal hotspots of DNA breakage, driving RAD51-mediated recombination during quiescence
    1
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    sciencedirect.com/science/article/pii/S1097276523000047
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9868349/
  25. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9827110/
  27. www.sciencedirect.com www.sciencedirect.com
    Inhibition of the PI3K/AKT/mTOR signaling promotes an M1 macrophage switch by repressing the ATF3-CXCL8 axis in Ewing sarcoma
    1
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    sciencedirect.com/science/article/pii/S0304383522005298
  28. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
    1
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    onlinelibrary.wiley.com/doi/10.1002/ps.7319
  29. Dec 2022
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9795480/
  31. aacrjournals.org aacrjournals.org
    Efficient Correction of Oncogenic KRAS and TP53 Mutations through CRISPR Base Editing
    1
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    aacrjournals.org/cancerres/article/82/17/3002/708290/Efficient-Correction-of-Oncogenic-KRAS-and-TP53
  32. www.sciencedirect.com www.sciencedirect.com
    Protocol to analyze population structure and migration history based on human genome variation data
    1
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    sciencedirect.com/science/article/pii/S2666166722008085
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    annotate_my_genomes: an easy-to-use pipeline to improve genome annotation and uncover neglected genes by hybrid RNA sequencing
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9724561/
  34. 52.53.155.43 52.53.155.43
    ccr-22-1134 (1)-html.html
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    52.53.155.43/a330afee06168544ac9523f76b06a20d3d6e36d2/ccr-22-1134-html.html
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Relative infectivity of the SARS-CoV-2 Omicron variant in human alveolar cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9659354/
  36. Nov 2022
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Protocol for base resolution mapping of ac4C using RedaC:T-seq
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9676198/
  38. www.sciencedirect.com www.sciencedirect.com
    Essential role of MESP1-RING1A complex in cardiac differentiation
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    sciencedirect.com/science/article/pii/S1534580722007614
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular and anatomical characterization of parabrachial neurons and their axonal projections
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    ncbi.nlm.nih.gov/pmc/articles/PMC9668336/
  40. www.sciencedirect.com www.sciencedirect.com
    Derivation of nociceptive sensory neurons from hiPSCs with early patterning and temporally controlled NEUROG2 overexpression
    1
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    sciencedirect.com/science/article/pii/S2667237522002387
  41. academic.oup.com academic.oup.com
    High-quality genome assembles from key Hawaiian coral species
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac098/6815755
  42. www.sciencedirect.com www.sciencedirect.com
    Transcription factor antagonism regulates heterogeneity in embryonic stem cell states
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    sciencedirect.com/science/article/pii/S109727652201022X
  43. www.sciencedirect.com www.sciencedirect.com
    Reconstructing mutational lineages in breast cancer by multi-patient-targeted single-cell DNA sequencing
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    sciencedirect.com/science/article/pii/S2666979X22001689
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9437574/
  45. Oct 2022
  46. 52.53.155.43 52.53.155.43
    ccr-22-1134 (1)-html.html
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    52.53.155.43/a330afee06168544ac9523f76b06a20d3d6e36d2/ccr-22-1134-html.html
  47. www.sciencedirect.com www.sciencedirect.com
    Interleukin-33-activated neuropeptide CGRP-producing memory Th2 cells cooperate with somatosensory neurons to induce conjunctival itch
    1
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    sciencedirect.com/science/article/pii/S1074761322005118
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    P2Y6 receptor-mediated signaling amplifies TLR-induced pro-inflammatory responses in microglia
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9531012/
  49. www.sciencedirect.com www.sciencedirect.com
    A cis-regulatory lexicon of DNA motif combinations mediating cell-type-specific gene regulation
    1
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    sciencedirect.com/science/article/pii/S2666979X22001409
  50. Sep 2022
  51. aacrjournals.org aacrjournals.org
    PU.1-dependent enhancer inhibition separates Tet2-deficient hematopoiesis from malignant transformation
    1
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    aacrjournals.org/bloodcancerdiscov/article/3/5/444/708355/PU-1-Dependent-Enhancer-Inhibition-Separates-Tet2
  52. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Comprehensive association analysis of speech recognition thresholds after cisplatin-based chemotherapy in survivors of adult-onset cancer
    1
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    onlinelibrary.wiley.com/doi/10.1002/cam4.5218
  53. academic.oup.com academic.oup.com
    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac085/6700067
  54. www.sciencedirect.com www.sciencedirect.com
    Acquired semi-squamatization during chemotherapy suggests differentiation as a therapeutic strategy for bladder cancer
    1
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    sciencedirect.com/science/article/pii/S1535610822003749
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of key endosymbiont genes may facilitate early host control of the chromatophore in Paulinella
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9450145/
  56. www.sciencedirect.com www.sciencedirect.com
    The human mitochondrial genome contains a second light strand promoter
    1
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    sciencedirect.com/science/article/pii/S109727652200764X
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8904296/
  58. Aug 2022
  59. www.sciencedirect.com www.sciencedirect.com
    N1-methylpseudouridine found within COVID-19 mRNA vaccines produces faithful protein products
    1
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    sciencedirect.com/science/article/pii/S2211124722011202
  60. www.sciencedirect.com www.sciencedirect.com
    Detection of m6A in single cultured cells using scDART-seq
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    sciencedirect.com/science/article/pii/S2666166722005263
  61. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
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    sciencedirect.com/science/article/pii/S2211124722010531
  62. aacrjournals.org aacrjournals.org
    Developmental pathways are epigenetically reprogrammed during lung cancer brain metastasis
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    aacrjournals.org/cancerres/article/82/15/2692/707331/Developmental-Pathways-Are-Epigenetically
  63. www.sciencedirect.com www.sciencedirect.com
    TOP1 CAD-seq: A protocol to map catalytically engaged topoisomerase 1 in human cells
    1
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    sciencedirect.com/science/article/pii/S2666166722004610
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Antibiotic resistance genes are differentially mobilized according to resistance mechanism
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9338424/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcription Elongation Machinery Is a Druggable Dependency and Potentiates Immunotherapy in Glioblastoma Stem Cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC8831451/
  66. Jul 2022
  67. 52.53.155.43 52.53.155.43
    A chromosome-scale genome assembly of the okapi (Okapia johnstoni)
    1
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    52.53.155.43/ca38f07792210b0253061a6791db53fa681aee2f/esac033-html.html
  68. www.sciencedirect.com www.sciencedirect.com
    Spatiotemporal genomic analysis reveals distinct molecular features in recurrent stage I non-small cell lung cancers
    1
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    sciencedirect.com/science/article/pii/S2211124722008415
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single B Cell Gene Co-Expression Networks Implicated in Prognosis, Proliferation, and Therapeutic Responses in Non-Small Cell Lung Cancer Bulk Tumors
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9265014/
  70. www.sciencedirect.com www.sciencedirect.com
    Volatile profiles of commercial vetch prepared via different processing methods
    1
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    sciencedirect.com/science/article/pii/S030881462201531X
  71. academic.oup.com academic.oup.com
    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac059/6619297
  72. www.cell.com www.cell.com
    Bacterial growth in multicellular aggregates leads to the emergence of complex life cycles
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    cell.com/current-biology/fulltext/S0960-9822(22)00923-X
  73. Jun 2022
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Clinicopathologic Characteristics of Grade 2/3 Meningiomas: A Perspective on the Role of Next-Generation Sequencing
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    ncbi.nlm.nih.gov/pmc/articles/PMC9236884/
  75. 52.53.155.43 52.53.155.43
    mcr-21-1039-html.html
    2
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    52.53.155.43/240568277fe12e2c0a6052e56a90b7b23828225f/mcr-21-1039 (1)-html.html
  76. www.nature.com www.nature.com
    The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia
    1
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    nature.com/articles/s41598-022-14893-5
  77. aacrjournals.org aacrjournals.org
    Quantification of neoantigen-mediated immunoediting in cancer evolution
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    aacrjournals.org/cancerres/article/82/12/2226/699353/Quantification-of-Neoantigen-Mediated
  78. academic.oup.com academic.oup.com
    Genomes and demographic histories of the endangered Bretschneidera sinensis (Akaniaceae)
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac050/6608505
  79. elifesciences.org elifesciences.org
    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3
    1
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    elifesciences.org/articles/66909
  80. www.sciencedirect.com www.sciencedirect.com
    EED is required for mouse primordial germ cell differentiation in the embryonic gonad
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    sciencedirect.com/science/article/pii/S1534580722003690
  81. www.sciencedirect.com www.sciencedirect.com
    Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine
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    sciencedirect.com/science/article/pii/S109727652200483X
  82. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9142147/
  83. academic.oup.com academic.oup.com
    Analysis of SARS-CoV-2 known and novel subgenomic mRNAs in cell culture, animal model, and clinical samples using LeTRS, a bioinformatic tool to identify unique sequence identifiers
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac045/6593429
  84. May 2022
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA-PK promotes DNA end resection at DNA double strand breaks in G0 cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9122494/
  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging Allele-Specific Expression for Therapeutic Response Gene Discovery in Glioblastoma
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9122831/
  87. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
    1
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    f1000research.com/articles/11-530
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial DNA Consensus Calling and Quality Filtering for Constructing Ancient Human Mitogenomes: Comparison of Two Widely Applied Methods
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    ncbi.nlm.nih.gov/pmc/articles/PMC9104972/
  89. www.sciencedirect.com www.sciencedirect.com
    Isolation disrupts social interactions and destabilizes brain development in bumblebees
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    sciencedirect.com/science/article/pii/S0960982222007023
  90. aacrjournals.org aacrjournals.org
    Melanoma-secreted Amyloid Beta Suppresses Neuroinflammation and Promotes Brain Metastasis
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    aacrjournals.org/cancerdiscovery/article/12/5/1314/694563/Melanoma-Secreted-Amyloid-Beta-Suppresses
  91. www.sciencedirect.com www.sciencedirect.com
    Cytoplasmic proteotoxicity regulates HRI-dependent phosphorylation of eIF2α via the Hsp70-Bag3 module
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    sciencedirect.com/science/article/pii/S2589004222005521
  92. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
    1
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    gigabytejournal.com/articles/51
  93. aacrjournals.org aacrjournals.org
    A Phenogenetic Axis that Modulates Clinical Manifestation and Predicts Treatment Outcome in Primary Myeloid NeoplasmsLandscape of Myeloid Neoplasms in a Chinese Cohort
    1
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    aacrjournals.org/cancerrescommun/article/2/4/258/694752/A-Phenogenetic-Axis-that-Modulates-Clinical
  94. 52.53.155.43 52.53.155.43
    Lessons learned about the biology and genomics of Diaphorina citri infection with “Candidatus Liberibacter asiaticus” by integrating new and archived organ-specific transcriptome data
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    52.53.155.43/d33d93644b6f555490c97ad70ff221cb688ba025/out-html.html
  95. Apr 2022
  96. journals.physiology.org journals.physiology.org
    Whole genome sequencing identifies a deletion mutation in the unknown-functional KCNG2 from familial sick sinus syndrome
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    journals.physiology.org/doi/full/10.1152/physiolgenomics.00132.2021
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  162. Sep 2021
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