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May 2022
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Targeted proteoform mapping uncovers specific Neurexin-3 variants required for dendritic inhibition

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Cross-species analysis of LZTR1 loss-of-function mutants demonstrates dependency to RIT1 orthologs

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A bidirectional switch in the Shank3 phosphorylation state biases synapses toward up- or downscaling

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Characterization and functional interrogation of the SARS-CoV-2 RNA interactome

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Generation of a CRF1-Cre transgenic rat and the role of central amygdala CRF1 cells in nociception and anxiety-like behavior

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Non-apoptotic activation of Drosophila caspase-2/9 modulates JNK signaling, the tumor microenvironment, and growth of wound-like tumors

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Rapid and efficient degradation of endogenous proteins in vivo identifies stage-specific roles of RNA Pol II pausing in mammalian development

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Epithelial STAT6 O-GlcNAcylation drives a concerted anti-helminth alarmin response dependent on tuft cell hyperplasia and Gasdermin C

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CCT2 is an aggrephagy receptor for clearance of solid protein aggregates

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The FUS::DDIT3 fusion oncoprotein inhibits BAF complex targeting and activity in myxoid liposarcoma

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Ubiquitin-mediated receptor degradation contributes to development of tolerance to MrgC agonist-induced pain inhibition in neuropathic rats

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Mar 2022
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Chromatin-associated orphan snoRNA regulates DNA damage-mediated differentiation via a non-canonical complex

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Mucus sialylation determines intestinal host-commensal homeostasis

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Targeting HNRNPM inhibits cancer stemness and enhances antitumor immunity in Wnt-activated hepatocellular carcinoma

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Cytidine Deaminase APOBEC3A Regulates PD-L1 Expression in Cancer Cells in a JNK/c-JUN-dependent Manner

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Neuronal mitochondria transport Pink1 mRNA via synaptojanin 2 to support local mitophagy

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Kynurenine importation by SLC7A11 propagates anti-ferroptotic signaling

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MLL::AF9 degradation induces rapid changes in transcriptional elongation and subsequent loss of an active chromatin landscape

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Deficiency of Mesencephalic Astrocyte-derived Neurotrophic Factor Affects Neurogenesis in Mouse Brain

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Dynamic control of chromatin-associated m6A methylation regulates nascent RNA synthesis

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An Inducible CRISPR/Cas9 Screen Identifies DTX2 as a Transcriptional Regulator of Human Telomerase

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Recruitment of DNA to tumor-derived microvesicles

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Small disulfide loops in peptide hormones mediate self-aggregation and secretory granule sorting

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Transcriptional regulation of neural stem cell expansion in the adult hippocampus

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FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons

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Imatinib and methazolamide ameliorate COVID-19-induced metabolic complications via elevating ACE2 enzymatic activity and inhibiting viral entry

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DOT1L activity in leukemia cells requires interaction with ubiquitylated H2B that promotes productive nucleosome binding

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Lipid kinases VPS34 and PIKfyve coordinate a phosphoinositide cascade to regulate retriever-mediated recycling on endosomes

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PD-L1 promotes myofibroblastic activation of hepatic stellate cells by distinct mechanisms selective for TGF-β receptor I versus II

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CRAF dimerization with ARAF regulates KRAS-driven tumor growth

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E3 ligase RNF167 and deubiquitinase STAMBPL1 modulate mTOR and cancer progression

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scDART-seq reveals distinct m6A signatures and mRNA methylation heterogeneity in single cells

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Synaptic targets of photoreceptors specialized to detect color and skylight polarization in Drosophila

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Harnessing rAAV-retro for gene manipulations in multiple pathways that are interrupted after spinal cord injury

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Histone deacetylase 3 contributes to the antiviral innate immunity of macrophages by interacting with FOXK1 to regulate STAT1/2 transcription

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Seipin localizes at endoplasmic-reticulum-mitochondria contact sites to control mitochondrial calcium import and metabolism in adipocytes

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Recruitment of MLL1 complex is essential for SETBP1 to induce myeloid transformation

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MAL2 mediates the formation of stable HER2 signaling complexes within lipid raft-rich membrane protrusions in breast cancer cells

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Dynamic stem cell selection safeguards the genomic integrity of the epidermis

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Toxoplasma gondii SAG1 Targeting Host Cell S100A6 for Parasite Invasion and Host Immunity

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Dihydroceramide desaturase promotes the formation of intraluminal vesicles and inhibits autophagy to increase exosome production

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Gene-specific quantification of nascent transcription following targeted degradation of endogenous proteins in cultured cells

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Coordinated repression of pro-differentiation genes via P-bodies and transcription maintains Drosophila intestinal stem cell identity

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Sumoylation of the human histone H4 tail inhibits p300-mediated transcription by RNA polymerase II in cellular extracts

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Cell cycle regulation of ER membrane biogenesis protects against chromosome missegregation

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LARP7 ameliorates cellular senescence and aging by allosterically enhancing SIRT1 deacetylase activity

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Short-chain fatty acids activate acetyltransferase p300

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Nde1 is a Rab9 effector for loading late endosomes to cytoplasmic dynein motor complex

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Cell-specific mitochondria affinity purification (CS-MAP) from Caenorhabditis elegans

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TM4SF5-dependent crosstalk between hepatocytes and macrophages to reprogram the inflammatory environment

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RNF13 Dileucine Motif Variants L311S and L312P Interfere with Endosomal Localization and AP-3 Complex Association

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RTN4/NoGo-receptor binding to BAI adhesion-GPCRs regulates neuronal development

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Acetyl-CoA derived from hepatic mitochondrial fatty acid β-oxidation aggravates inflammation by enhancing p65 acetylation

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A nonautophagic role of ATG5 in regulating cell growth by targeting c-Myc for proteasome-mediated degradation

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A general role for TANGO1, encoded by MIA3, in secretory pathway organization and function

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MK2 promotes Tfcp2l1 degradation via β-TrCP ubiquitin ligase to regulate mouse embryonic stem cell self-renewal

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MAPK pathway activation selectively inhibits ASCL1-driven small cell lung cancer

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PUPIL enables mapping and stamping of transient electrical connectivity in developing nervous systems

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Andrographolide prevents bone loss via targeting ERRalpha-regulated metabolic adaption of osteoclastogenesis

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The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation

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Site-specific N-glycosylation of integrin α2 mediates collagen-dependent cell survival

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Tyrosine Phosphorylation of DEPTOR Functions as a Molecular Switch to Activate mTOR Signaling

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Costimulation molecules differentially regulate the ERK-Zfp831 axis to shape T follicular helper cell differentiation

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A mouse-specific retrotransposon drives a conserved Cdk2ap1 isoform essential for development

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Functional architecture of neural circuits for leg proprioception in Drosophila

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Activity-dependent modulation of synapse-regulating genes in astrocytes

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Bombesin-like peptide recruits disinhibitory cortical circuits and enhances fear memories

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The 3′-flap endonuclease XPF-ERCC1 promotes alternative end joining and chromosomal translocation during B cell class switching

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SATB2 preserves colon stem cell identity and mediates ileum-colon conversion via enhancer remodeling

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Structural basis and regulation of the reductive stress response

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PKCλ/ι inhibition activates an ULK2-mediated interferon response to repress tumorigenesis

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The oncomicropeptide APPLE promotes hematopoietic malignancy by enhancing translation initiation

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A hydride transfer complex reprograms NAD metabolism and bypasses senescence

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DOT1L O-GlcNAcylation promotes its protein stability and MLL-fusion leukemia cell proliferation

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Pharmacological inhibition of arachidonate 12-lipoxygenase ameliorates myocardial ischemia-reperfusion injury in multiple species

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RORα is critical for mTORC1 activity in T cell-mediated colitis

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Senescent immune cells release grancalcin to promote skeletal aging

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A strategy to assess the cellular activity of E3 ligase components against neo-substrates using electrophilic probes

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A NSD3-targeted PROTAC suppresses NSD3 and cMyc oncogenic nodes in cancer cells

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Regulation of lipid homeostasis by the TBC protein dTBC1D22 via modulation of the small GTPase Rab40 to facilitate lipophagy

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A Brucella effector modulates the Arf6-Rab8a GTPase cascade to promote intravacuolar replication

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Induced phase separation of mutant NF2 imprisons the cGAS-STING machinery to abrogate antitumor immunity

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Dual role for CXCL12 signaling in semilunar valve development

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Compromised mitochondrial quality control triggers lipin1-related rhabdomyolysis

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Somatic Epigenetic Silencing of RIPK3 Inactivates Necroptosis and Contributes to Chemoresistance in Malignant Mesothelioma

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CRISPR-based peptide library display and programmable microarray self-assembly for rapid quantitative protein binding assays

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SHP2-Mediated Inhibition of DNA Repair Contributes to cGAS–STING Activation and Chemotherapeutic Sensitivity in Colon Cancer

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Cryptosporidium rhoptry effector protein ROP1 injected during invasion targets the host cytoskeletal modulator LMO7

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A BRD4-mediated elongation control point primes transcribing RNA polymerase II for 3′-processing and termination

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Sensorimotor pathway controlling stopping behavior during chemotaxis in the Drosophila melanogaster larva

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Interactions between the Ig-Superfamily Proteins DIP-α and Dpr6/10 Regulate Assembly of Neural Circuits

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TBK1 Suppresses RIPK1-Driven Apoptosis and Inflammation during Development and in Aging

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Serotonergic Modulation of a Visual Microcircuit in Drosophila melanogaster

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Neuron-Subtype-Specific Expression, Interaction Affinities, and Specificity Determinants of DIP/Dpr Cell Recognition Proteins

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Protein Tyrosine Phosphatase δ mediates the Sema3A-induced cortical basal dendritic arborization through the activation of Fyn tyrosine kinase

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A plant-like mechanism coupling m6A reading to polyadenylation safeguards transcriptome integrity and developmental gene partitioning in Toxoplasma

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A novel human Cdh1 mutation impairs anaphase promoting complex/cyclosome (APC/C) activity resulting in microcephaly, psychomotor retardation and epilepsy

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Innate immune response orchestrates phosphoribosyl pyrophosphate synthetases to support DNA repair

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TRIM8 modulates the EWS/FLI oncoprotein to promote survival in Ewing sarcoma

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The astrocyte network in the ventral nerve cord neuropil of the Drosophila third‐instar larva

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The Transcription Factor Tox2 Drives T Follicular Helper Cell Development via Regulating Chromatin Accessibility

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Differential expression and subcellular localization of Copines in mouse retina

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KDM3A Senses Oxygen Availability to Regulate PGC-1α-Mediated Mitochondrial Biogenesis

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Structural Basis of Paxillin Recruitment by Kindlin-2 in Regulating Cell Adhesion

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Specialization of the Drosophila nuclear export family protein Nxf3 for piRNA precursor export

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Nuclear PGK1 Alleviates ADP-Dependent Inhibition of CDC7 to Promote DNA Replication

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Neuroligin-4 Regulates Excitatory Synaptic Transmission in Human Neurons

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EphA2‐to‐YAP Pathway Drives Gastric Cancer Growth and Therapy Resistance

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Functional analysis of novel RUNX2 mutations identified in patients with Cleidocranial dysplasia

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Pink1 regulates FKBP5 interaction with AKT/PHLPP and protects neurons from neurotoxin stress induced by MPP+

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Divergent Connectivity of Homologous Command-like Neurons Mediates Segment-Specific Touch Responses in Drosophila

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Nucleo-cytoplasmic Partitioning of ARF Proteins Controls Auxin Responses in Arabidopsis thaliana

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Enteric glia regulate lymphocyte activation via autophagy-mediated MHC-II expression

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Allosteric activation of T cell antigen receptor signaling by quaternary structure relaxation

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Extracellular domain shedding of the ALK receptor mediates neuroblastoma cell migration

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Feedback control of PLK1 by Apolo1 ensures accurate chromosome segregation

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Aging-related upregulation of the homeobox gene caudal represses intestinal stem cell differentiation in Drosophila

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The RAS GTPase RIT1 compromises mitotic fidelity through spindle assembly checkpoint suppression

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Inhibition of YTHDF2 triggers proteotoxic cell death in MYC-driven breast cancer

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Targeting p130Cas- and microtubule-dependent MYC regulation sensitizes pancreatic cancer to ERK MAPK inhibition

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Ca2+/calmodulin kinase II–dependent regulation of βIV-spectrin modulates cardiac fibroblast gene expression, proliferation, and contractility

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  Cell Signaling 3724
  
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Tripartite motif 16 ameliorates nonalcoholic steatohepatitis by promoting the degradation of phospho-TAK1

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TMBIM1 is an inhibitor of adipogenesis and its depletion promotes adipocyte hyperplasia and improves obesity-related metabolic disease

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CIB2 and CIB3 are auxiliary subunits of the mechanotransduction channel of hair cells

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Generation of locus-specific degradable tag knock-ins in mouse and human cell lines

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Choline kinase alpha 2 acts as a protein kinase to promote lipolysis of lipid droplets

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Regulation of coordinated muscular relaxation in Drosophila larvae by a pattern-regulating intersegmental circuit

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The zinc finger protein Miz1 suppresses liver tumorigenesis by restricting hepatocyte-driven macrophage activation and inflammation

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The autophagy protein Becn1 improves insulin sensitivity by promoting adiponectin secretion via exocyst binding

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Dipeptidyl peptidase 9 sets a threshold for CARD8 inflammasome formation by sequestering its active C-terminal fragment

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A protocol for rapid degradation of endogenous transcription factors in mammalian cells and identification of direct regulatory targets

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Viral tegument proteins restrict cGAS-DNA phase separation to mediate immune evasion

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SUCLA2-coupled regulation of GLS succinylation and activity counteracts oxidative stress in tumor cells

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Pro- and anti-apoptotic fate decisions induced by di- and trimeric synthetic cytokine receptors

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Chromatin structure-dependent histone incorporation revealed by a genome-wide deposition assay

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Helicobacter pylori CagA elicits BRCAness to induce genome instability that may underlie bacterial gastric carcinogenesis

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TSC1 binding to lysosomal PIPs is required for TSC complex translocation and mTORC1 regulation

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Specific inhibition of oncogenic RAS using cell-permeable RAS-binding domains

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AHNAK controls 53BP1-mediated p53 response by restraining 53BP1 oligomerization and phase separation

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Non-canonical Targets of HIF1a Impair Oligodendrocyte Progenitor Cell Function

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Regenerative Reprogramming of the Intestinal Stem Cell State via Hippo Signaling Suppresses Metastatic Colorectal Cancer

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Akt-mTOR hypoactivity in bipolar disorder gives rise to cognitive impairments associated with altered neuronal structure and function

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Mutations in Spliceosomal Genes PPIL1 and PRP17 Cause Neurodegenerative Pontocerebellar Hypoplasia with Microcephaly

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A Neural Network for Wind-Guided Compass Navigation

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ATG4 family proteins drive phagophore growth independently of the LC3/GABARAP lipidation system

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Stabilization of ERK-Phosphorylated METTL3 by USP5 Increases m6A Methylation

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Zmat3 Is a Key Splicing Regulator in the p53 Tumor Suppression Program

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CHK1 Inhibitor Blocks Phosphorylation of FAM122A and Promotes Replication Stress

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TBK1-Mediated DRP1 Targeting Confers Nucleic Acid Sensing to Reprogram Mitochondrial Dynamics and Physiology

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Proline Hydroxylation Primes Protein Kinases for Autophosphorylation and Activation

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Stress Induces Dynamic, Cytotoxicity-Antagonizing TDP-43 Nuclear Bodies via Paraspeckle LncRNA NEAT1-Mediated Liquid-Liquid Phase Separation

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Generation of Plasmodium yoelii malaria parasite for conditional degradation of proteins

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Ubiquitin-dependent remodeling of the actin cytoskeleton drives cell fusion

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NPC1-mTORC1 Signaling Couples Cholesterol Sensing to Organelle Homeostasis and Is a Targetable Pathway in Niemann-Pick Type C

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Stromal SOX2 Upregulation Promotes Tumorigenesis through the Generation of a SFRP1/2-Expressing Cancer-Associated Fibroblast Population

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The Rag GTPase Regulates the Dynamic Behavior of TSC Downstream of Both Amino Acid and Growth Factor Restriction

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A kinome screen reveals that Nemo-like kinase is a key suppressor of hepatic gluconeogenesis

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CD276 expression enables squamous cell carcinoma stem cells to evade immune surveillance

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HectD1 controls hematopoietic stem cell regeneration by coordinating ribosome assembly and protein synthesis

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Toll receptors remodel epithelia by directing planar-polarized Src and PI3K activity

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  DOI: 10.1016/j.devcel.2021.04.012
  
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The ZMYND8-regulated mevalonate pathway endows YAP-high intestinal cancer with metabolic vulnerability

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  DOI: 10.1016/j.molcel.2021.04.009
  
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NAD+ Metabolism Maintains Inducible PD-L1 Expression to Drive Tumor Immune Evasion

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  DOI: 10.1016/j.cmet.2020.10.021
  
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TANK-Binding Kinase 1 Regulates the Localization of Acyl-CoA Synthetase ACSL1 to Control Hepatic Fatty Acid Oxidation

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PHD3 Loss Promotes Exercise Capacity and Fat Oxidation in Skeletal Muscle

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  DOI: 10.1016/j.cmet.2020.06.017
  
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Modeling plasticity and dysplasia of pancreatic ductal organoids derived from human pluripotent stem cells

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  DOI: 10.1016/j.stem.2021.03.005
  
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A Structural Model of the Endogenous Human BAF Complex Informs Disease Mechanisms

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  DOI: 10.1016/j.cell.2020.09.051
  
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A Cellular Mechanism to Detect and Alleviate Reductive Stress

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Cell Types Promoting Goosebumps Form a Niche to Regulate Hair Follicle Stem Cells

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  DOI: 10.1016/j.cell.2020.06.031
  
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A visual pathway for skylight polarization processing in Drosophila

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  DOI: 10.7554/eLife.63225
  
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CD81 Controls Beige Fat Progenitor Cell Growth and Energy Balance via FAK Signaling

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Microglial Remodeling of the Extracellular Matrix Promotes Synapse Plasticity

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MDMX acts as a pervasive preleukemic-to-acute myeloid leukemia transition mechanism

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  DOI: 10.1016/j.ccell.2021.02.006
  
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Elevated CXorf67 Expression in PFA Ependymomas Suppresses DNA Repair and Sensitizes to PARP Inhibitors

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Posttranscriptional regulation of de novo lipogenesis by glucose-induced O-GlcNAcylation

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Complex-dependent histone acetyltransferase activity of KAT8 determines its role in transcription and cellular homeostasis

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SETD2 Restricts Prostate Cancer Metastasis by Integrating EZH2 and AMPK Signaling Pathways

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Selective Inhibition of STRN3-Containing PP2A Phosphatase Restores Hippo Tumor-Suppressor Activity in Gastric Cancer

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