5,106 Matching Annotations
  1. Jan 2021
  2. europepmc.org europepmc.org
    Benchmarking single-cell RNA-sequencing protocols for cell atlas projects.
    14
    1. TiagoLubiana 14 Jan 2021
      RNA capture

      http://www.wikidata.org/entity/Q104519531

    2. TiagoLubiana 14 Jan 2021
      protocols

      http://www.wikidata.org/entity/Q41689629

    3. TiagoLubiana 14 Jan 2021
      organisms

      http://www.wikidata.org/entity/Q7239

    4. TiagoLubiana 14 Jan 2021
      organs

      http://www.wikidata.org/entity/Q712378

    5. TiagoLubiana 14 Jan 2021
      tissues

      http://www.wikidata.org/entity/Q40397

    6. TiagoLubiana 14 Jan 2021
      cell atlases

      http://www.wikidata.org/entity/Q104450703

    7. TiagoLubiana 14 Jan 2021
      cell-type

      http://www.wikidata.org/entity/Q189118

    8. TiagoLubiana 14 Jan 2021
      cell types

      http://www.wikidata.org/entity/Q189118

    9. TiagoLubiana 14 Jan 2021
      cells

      http://www.wikidata.org/entity/Q7868

    10. TiagoLubiana 14 Jan 2021
      cells

      http://www.wikidata.org/entity/Q7868

    11. TiagoLubiana 14 Jan 2021
      transcriptomes

      http://www.wikidata.org/entity/Q252857

    12. TiagoLubiana 14 Jan 2021
      technique

      http://www.wikidata.org/entity/Q2695280

    13. TiagoLubiana 14 Jan 2021
      scRNA-seq

      http://www.wikidata.org/entity/Q18409577

    14. TiagoLubiana 14 Jan 2021
      Single-cell RNA sequencing

      http://www.wikidata.org/entity/Q18409577

    Visit annotations in context

    Annotators

    URL

    europepmc.org/article/MED/32518403
  3. www.medrxiv.org www.medrxiv.org
    Integrated Single-Cell Atlases Reveal an Oral SARS-CoV-2 Infection and Transmission Axis.
    55
    1. TiagoLubiana 14 Jan 2021
      viral transmission

      http://www.wikidata.org/entity/Q21107325

    2. TiagoLubiana 14 Jan 2021
      saliva

      http://www.wikidata.org/entity/Q155925

    3. TiagoLubiana 14 Jan 2021
      oral cavity

      http://www.wikidata.org/entity/Q27042858

    4. TiagoLubiana 14 Jan 2021
      antibodies

      http://www.wikidata.org/entity/Q79460

    5. TiagoLubiana 13 Jan 2021
      proteins

      http://www.wikidata.org/entity/Q8054

    6. TiagoLubiana 13 Jan 2021
      salivary

      http://www.wikidata.org/entity/Q155925

    7. TiagoLubiana 13 Jan 2021
      Saliva

      http://www.wikidata.org/entity/Q155925

    8. TiagoLubiana 13 Jan 2021
      cohort

      http://www.wikidata.org/entity/Q1303415

    9. TiagoLubiana 13 Jan 2021
      recovery

      http://www.wikidata.org/entity/Q104808370

    10. TiagoLubiana 13 Jan 2021
      taste loss

      http://www.wikidata.org/entity/Q606216

    11. TiagoLubiana 13 Jan 2021
      symptoms

      http://www.wikidata.org/entity/Q169872

    12. TiagoLubiana 13 Jan 2021
      saliva

      http://www.wikidata.org/entity/Q155925

    13. TiagoLubiana 13 Jan 2021
      viral burden

      http://www.wikidata.org/entity/Q2528140

    14. TiagoLubiana 13 Jan 2021
      dynamics

      http://www.wikidata.org/entity/Q128030

    15. TiagoLubiana 13 Jan 2021
      viral shedding

      http://www.wikidata.org/entity/Q7933612

    16. TiagoLubiana 13 Jan 2021
      samples

      http://www.wikidata.org/entity/Q485146

    17. TiagoLubiana 13 Jan 2021
      saliva

      http://www.wikidata.org/entity/Q155925

    18. TiagoLubiana 13 Jan 2021
      nasopharyngeal

      http://www.wikidata.org/entity/Q552082

    19. TiagoLubiana 13 Jan 2021
      RNA

      http://www.wikidata.org/entity/Q11053

    20. TiagoLubiana 13 Jan 2021
      SARS-CoV-2

      http://www.wikidata.org/entity/Q82069695

    21. TiagoLubiana 13 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    22. TiagoLubiana 13 Jan 2021
      expression

      http://www.wikidata.org/entity/Q26972

    23. TiagoLubiana 13 Jan 2021
      epithelial cells

      http://www.wikidata.org/entity/Q15176415

    24. TiagoLubiana 13 Jan 2021
      mucosa

      http://www.wikidata.org/entity/Q1776131

    25. TiagoLubiana 13 Jan 2021
      salivary glands

      http://www.wikidata.org/entity/Q134938

    26. TiagoLubiana 13 Jan 2021
      autopsy tissue

      http://www.wikidata.org/entity/Q104808029

    27. TiagoLubiana 13 Jan 2021
      mucosae

      http://www.wikidata.org/entity/Q1776131

    28. TiagoLubiana 13 Jan 2021
      suprabasal cells

      http://www.wikidata.org/entity/Q104807928

    29. TiagoLubiana 13 Jan 2021
      salivary glands

      http://www.wikidata.org/entity/Q134938

    30. TiagoLubiana 13 Jan 2021
      acini

      http://www.wikidata.org/entity/Q66556274

    31. TiagoLubiana 13 Jan 2021
      ducts

      http://www.wikidata.org/entity/Q66556304

    32. TiagoLubiana 13 Jan 2021
      epithelia

      http://www.wikidata.org/entity/Q41301

    33. TiagoLubiana 13 Jan 2021
      expression

      http://www.wikidata.org/entity/Q26972

    34. TiagoLubiana 13 Jan 2021
      viral entry factor

      http://www.wikidata.org/entity/Q104807857

    35. TiagoLubiana 13 Jan 2021
      cell clusters

      http://www.wikidata.org/entity/Q104745744

    36. TiagoLubiana 13 Jan 2021
      immune

      http://www.wikidata.org/entity/Q104524156

    37. TiagoLubiana 13 Jan 2021
      mesenchymal

      http://www.wikidata.org/entity/Q66568500

    38. TiagoLubiana 13 Jan 2021
      epithelial

      http://www.wikidata.org/entity/Q15176415

    39. TiagoLubiana 13 Jan 2021
      gingiva

      http://www.wikidata.org/entity/Q104807781

    40. TiagoLubiana 13 Jan 2021
      human minor salivary glands

      http://www.wikidata.org/entity/Q104807749

    41. TiagoLubiana 13 Jan 2021
      data-sets

      http://www.wikidata.org/entity/Q1172284

    42. TiagoLubiana 13 Jan 2021
      single-cell RNA sequencing

      http://www.wikidata.org/entity/Q18409577

    43. TiagoLubiana 13 Jan 2021
      infection

      http://www.wikidata.org/entity/Q104807470

    44. TiagoLubiana 13 Jan 2021
      infected

      http://www.wikidata.org/entity/Q104807470

    45. TiagoLubiana 13 Jan 2021
      infection

      http://www.wikidata.org/entity/Q104807470

    46. TiagoLubiana 13 Jan 2021
      SARS-CoV-2

      http://www.wikidata.org/entity/Q82069695

    47. TiagoLubiana 13 Jan 2021
      SARS-CoV-2

      http://www.wikidata.org/entity/Q82069695

    48. TiagoLubiana 13 Jan 2021
      SARS-CoV-2

      http://www.wikidata.org/entity/Q82069695

    49. TiagoLubiana 13 Jan 2021
      SARS-CoV-2

      http://www.wikidata.org/entity/Q82069695

    50. TiagoLubiana 13 Jan 2021
      COVID-19

      http://www.wikidata.org/entity/Q84263196

    51. TiagoLubiana 13 Jan 2021
      COVID-19

      http://www.wikidata.org/entity/Q84263196

    52. TiagoLubiana 13 Jan 2021
      COVID-19

      http://www.wikidata.org/entity/Q84263196

    53. TiagoLubiana 13 Jan 2021
      COVID-19

      http://www.wikidata.org/entity/Q84263196

    54. TiagoLubiana 13 Jan 2021
      oral cavity

      http://www.wikidata.org/entity/Q27042858

    55. TiagoLubiana 13 Jan 2021
      infection

      http://www.wikidata.org/entity/Q104807470

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    Annotators

    URL

    medrxiv.org/cgi/content/10.1101/2020.10.26.20219089
  4. doi.org doi.org
    https://doi.org/10.1101/2020.04.19.049254
    108
    1. TiagoLubiana 11 Jan 2021
      disease susceptibility

      http://www.wikidata.org/entity/Q65534164

    2. TiagoLubiana 11 Jan 2021
      pathogenesis

      http://www.wikidata.org/entity/Q372016

    3. TiagoLubiana 11 Jan 2021
      molecular pathways

      http://www.wikidata.org/entity/Q4915012

    4. TiagoLubiana 11 Jan 2021
      clinical course

      http://www.wikidata.org/entity/Q86758334

    5. TiagoLubiana 11 Jan 2021
      COVID-19

      http://www.wikidata.org/entity/Q84263196

    6. TiagoLubiana 11 Jan 2021
      epidemiology

      http://www.wikidata.org/entity/Q133805

    7. TiagoLubiana 11 Jan 2021
      viral entry

      http://www.wikidata.org/entity/Q4118894

    8. TiagoLubiana 11 Jan 2021
      renal epithelial cells

      http://www.wikidata.org/entity/Q104777710

    9. TiagoLubiana 11 Jan 2021
      genes

      http://www.wikidata.org/entity/Q7187

    10. TiagoLubiana 11 Jan 2021
      genes

      http://www.wikidata.org/entity/Q7187

    11. TiagoLubiana 11 Jan 2021
      complement

      http://www.wikidata.org/entity/Q334848

    12. TiagoLubiana 11 Jan 2021
      TNF response pathway

      http://www.wikidata.org/entity/Q14864211

    13. TiagoLubiana 11 Jan 2021
      IL1R

      http://www.wikidata.org/entity/Q18027814

    14. TiagoLubiana 11 Jan 2021
      IL6

      http://www.wikidata.org/entity/Q14865236

    15. TiagoLubiana 11 Jan 2021
      its recepto

      http://www.wikidata.org/entity/Q18027836

    16. TiagoLubiana 11 Jan 2021
      cross-talk

      http://www.wikidata.org/entity/Q104519408

    17. TiagoLubiana 11 Jan 2021
      macrophage

      http://www.wikidata.org/entity/Q184204

    18. TiagoLubiana 11 Jan 2021
      epithelial

      http://www.wikidata.org/entity/Q15176415

    19. TiagoLubiana 11 Jan 2021
      immune functions

      http://www.wikidata.org/entity/Q182581

    20. TiagoLubiana 11 Jan 2021
      viral entry

      http://www.wikidata.org/entity/Q4118894

    21. TiagoLubiana 11 Jan 2021
      gut tissues

      http://www.wikidata.org/entity/Q104192151

    22. TiagoLubiana 11 Jan 2021
      lung

      http://www.wikidata.org/entity/Q104525708

    23. TiagoLubiana 11 Jan 2021
      nasal

      http://www.wikidata.org/entity/Q104777904

    24. TiagoLubiana 11 Jan 2021
      gene expression

      http://www.wikidata.org/entity/Q26972

    25. TiagoLubiana 11 Jan 2021
      analysis

      http://www.wikidata.org/entity/Q217602

    26. TiagoLubiana 11 Jan 2021
      samples

      http://www.wikidata.org/entity/Q485146

    27. TiagoLubiana 11 Jan 2021
      pediatric

      http://www.wikidata.org/entity/Q123028

    28. TiagoLubiana 11 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    29. TiagoLubiana 11 Jan 2021
      expression

      http://www.wikidata.org/entity/Q26972

    30. TiagoLubiana 11 Jan 2021
      susceptibility

      http://www.wikidata.org/entity/Q65534164

    31. TiagoLubiana 11 Jan 2021
      COVID-19

      http://www.wikidata.org/entity/Q84263196

    32. TiagoLubiana 11 Jan 2021
      epidemiologically

      http://www.wikidata.org/entity/Q133805

    33. TiagoLubiana 11 Jan 2021
      smoking

      http://www.wikidata.org/entity/Q662860

    34. TiagoLubiana 11 Jan 2021
      male gender

      http://www.wikidata.org/entity/Q6581097

    35. TiagoLubiana 11 Jan 2021
      age

      http://www.wikidata.org/entity/Q185836

    36. TiagoLubiana 11 Jan 2021
      ACE2 + TMPRSS2 + cells

      http://www.wikidata.org/entity/Q104623141

    37. TiagoLubiana 11 Jan 2021
      CTSL

      http://www.wikidata.org/entity/Q18022191

    38. TiagoLubiana 11 Jan 2021
      TMPRSS2

      http://www.wikidata.org/entity/Q18032025

    39. TiagoLubiana 11 Jan 2021
      cell types

      http://www.wikidata.org/entity/Q189118

    40. TiagoLubiana 11 Jan 2021
      Cell type specificity

      http://www.wikidata.org/entity/Q104777745

    41. TiagoLubiana 11 Jan 2021
      cell type-specific

      http://www.wikidata.org/entity/Q104777745

    42. TiagoLubiana 11 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    43. TiagoLubiana 11 Jan 2021
      samples

      http://www.wikidata.org/entity/Q485146

    44. TiagoLubiana 11 Jan 2021
      age groups,

      http://www.wikidata.org/entity/Q42401304

    45. TiagoLubiana 11 Jan 2021
      elderly

      http://www.wikidata.org/entity/Q2191986

    46. TiagoLubiana 11 Jan 2021
      childhood

      http://www.wikidata.org/entity/Q7569

    47. TiagoLubiana 11 Jan 2021
      adult

      http://www.wikidata.org/entity/Q9584157

    48. TiagoLubiana 11 Jan 2021
      fetal

      http://www.wikidata.org/entity/Q26513

    49. TiagoLubiana 11 Jan 2021
      donors

      http://www.wikidata.org/entity/Q65982613

    50. TiagoLubiana 11 Jan 2021
      nasal

      http://www.wikidata.org/entity/Q7363

    51. TiagoLubiana 11 Jan 2021
      lung parenchyma

      http://www.wikidata.org/entity/Q3365000

    52. TiagoLubiana 11 Jan 2021
      airways

      http://www.wikidata.org/entity/Q13400765

    53. TiagoLubiana 11 Jan 2021
      airway

      http://www.wikidata.org/entity/Q13400765

    54. TiagoLubiana 11 Jan 2021
      cells

      http://www.wikidata.org/entity/Q7868

    55. TiagoLubiana 11 Jan 2021
      olfactory sustentacular cells

      http://www.wikidata.org/entity/Q104777709

    56. TiagoLubiana 11 Jan 2021
      heart pericytes

      http://www.wikidata.org/entity/Q104777704

    57. TiagoLubiana 11 Jan 2021
      cardiomyocytes

      http://www.wikidata.org/entity/Q1047227

    58. TiagoLubiana 11 Jan 2021
      corneal epithelial cells

      http://www.wikidata.org/entity/Q66568505

    59. TiagoLubiana 11 Jan 2021
      gut enterocytes

      http://www.wikidata.org/entity/Q1340349

    60. TiagoLubiana 11 Jan 2021
      transmission

      http://www.wikidata.org/entity/Q525512

    61. TiagoLubiana 11 Jan 2021
      pathology

      http://www.wikidata.org/entity/Q7208

    62. TiagoLubiana 11 Jan 2021
      COVID-19

      http://www.wikidata.org/entity/Q84263196

    63. TiagoLubiana 11 Jan 2021
      scRNA-seq

      http://www.wikidata.org/entity/Q18409577

    64. TiagoLubiana 11 Jan 2021
      meta-analyses

      http://www.wikidata.org/entity/Q815382

    65. TiagoLubiana 11 Jan 2021
      organs

      http://www.wikidata.org/entity/Q712378

    66. TiagoLubiana 11 Jan 2021
      cells

      http://www.wikidata.org/entity/Q7868

    67. TiagoLubiana 11 Jan 2021
      Cells

      http://www.wikidata.org/entity/Q7868

    68. TiagoLubiana 11 Jan 2021
      airways

      http://www.wikidata.org/entity/Q13400765

    69. TiagoLubiana 11 Jan 2021
      alveoli

      http://www.wikidata.org/entity/Q191341

    70. TiagoLubiana 11 Jan 2021
      nasal passages

      http://www.wikidata.org/entity/Q6966575

    71. TiagoLubiana 11 Jan 2021
      viral infection

      http://www.wikidata.org/entity/Q1928978

    72. TiagoLubiana 11 Jan 2021
      co-express

      http://www.wikidata.org/entity/Q104623136

    73. TiagoLubiana 11 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    74. TiagoLubiana 11 Jan 2021
      proteases

      http://www.wikidata.org/entity/Q212410

    75. TiagoLubiana 11 Jan 2021
      respiratory epithelial cells

      http://www.wikidata.org/entity/Q101062683

    76. TiagoLubiana 11 Jan 2021
      subsets

      http://www.wikidata.org/entity/Q189118

    77. TiagoLubiana 11 Jan 2021
      cellular entry

      http://www.wikidata.org/entity/Q4118894

    78. TiagoLubiana 11 Jan 2021
      proteases

      http://www.wikidata.org/entity/Q212410

    79. TiagoLubiana 11 Jan 2021
      proteases

      http://www.wikidata.org/entity/Q212410

    80. TiagoLubiana 11 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    81. TiagoLubiana 11 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    82. TiagoLubiana 10 Jan 2021
      Joint expression

      http://www.wikidata.org/entity/Q104623136

    83. TiagoLubiana 10 Jan 2021
      organs

      http://www.wikidata.org/entity/Q712378

    84. TiagoLubiana 10 Jan 2021
      datasets

      http://www.wikidata.org/entity/Q1172284

    85. TiagoLubiana 10 Jan 2021
      RNA expression

      http://www.wikidata.org/entity/Q104767501

    86. TiagoLubiana 10 Jan 2021
      cell type

      http://www.wikidata.org/entity/Q189118

    87. TiagoLubiana 10 Jan 2021
      tissue

      http://www.wikidata.org/entity/Q40397

    88. TiagoLubiana 10 Jan 2021
      pathology

      http://www.wikidata.org/entity/Q7208

    89. TiagoLubiana 10 Jan 2021
      viral entry

      http://www.wikidata.org/entity/Q4118894

    90. TiagoLubiana 10 Jan 2021
      datasets

      http://www.wikidata.org/entity/Q1172284

    91. TiagoLubiana 10 Jan 2021
      airways

      http://www.wikidata.org/entity/Q13400765

    92. TiagoLubiana 10 Jan 2021
      lung

      http://www.wikidata.org/entity/Q7886

    93. TiagoLubiana 10 Jan 2021
      single-cell

      http://www.wikidata.org/entity/Q18409577

    94. TiagoLubiana 10 Jan 2021
      single-nucleus RNA-Seq

      http://www.wikidata.org/entity/Q103815741

    95. TiagoLubiana 10 Jan 2021
      CTSL

      http://www.wikidata.org/entity/Q18022191

    96. TiagoLubiana 10 Jan 2021
      TMPRSS2

      http://www.wikidata.org/entity/Q18032025

    97. TiagoLubiana 10 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    98. TiagoLubiana 10 Jan 2021
      ACE2

      intereting mix of concepts of gene and protein. ACE2 was described previously as "membrane bound" and now it is talking about "RNA expression of ACE2" which is quite clearly about the gene .

      This is simply not resolvable from a text mining perspective.

    99. TiagoLubiana 10 Jan 2021
      CTSL

      http://www.wikidata.org/entity/Q5052487

    100. TiagoLubiana 10 Jan 2021
      Cathepsin L

      http://www.wikidata.org/entity/Q5052487

    101. TiagoLubiana 10 Jan 2021
      transmembrane protease serine 2

      http://www.wikidata.org/entity/Q21126599

    102. TiagoLubiana 10 Jan 2021
      TMPRSS2

      http://www.wikidata.org/entity/Q21126599

    103. TiagoLubiana 10 Jan 2021
      ACE2

      http://www.wikidata.org/entity/Q14875321

    104. TiagoLubiana 10 Jan 2021
      angiotensin-converting enzyme 2

      angiotensin-converting enzyme 2

    105. TiagoLubiana 10 Jan 2021
      SARS-CoV2

      http://www.wikidata.org/entity/Q82069695

    106. TiagoLubiana 10 Jan 2021
      SARS-CoV-2

      http://www.wikidata.org/entity/Q82069695

    107. TiagoLubiana 10 Jan 2021
      SARS-CoV-2

      http://www.wikidata.org/entity/Q82069695

    108. TiagoLubiana 10 Jan 2021
      COVID-19 pandemic

      http://www.wikidata.org/entity/Q81068910

    Visit annotations in context

    Annotators

    URL

    doi.org/10.1101/2020.04.19.049254
  5. europepmc.org europepmc.org
    Cells and gene expression programs in the adult human heart
    23
    1. TiagoLubiana 09 Jan 2021
      disease

      http://www.wikidata.org/entity/Q12136

    2. TiagoLubiana 09 Jan 2021
      homeostasis

      http://www.wikidata.org/entity/Q103191

    3. TiagoLubiana 09 Jan 2021
      heart

      http://www.wikidata.org/entity/Q1072

    4. TiagoLubiana 09 Jan 2021
      skeletal muscle

      http://www.wikidata.org/entity/Q1048687

    5. TiagoLubiana 09 Jan 2021
      ventricles

      http://www.wikidata.org/entity/Q2002035

    6. TiagoLubiana 09 Jan 2021
      atria

      http://www.wikidata.org/entity/Q1074839

    7. TiagoLubiana 09 Jan 2021
      cardiomyocyte

      http://www.wikidata.org/entity/Q1047227

    8. TiagoLubiana 09 Jan 2021
      fibroblast

      http://www.wikidata.org/entity/Q463418

    9. TiagoLubiana 09 Jan 2021
      macrophage

      http://www.wikidata.org/entity/Q184204

    10. TiagoLubiana 09 Jan 2021
      reparative phenotypes

      http://www.wikidata.org/entity/Q104746180

    11. TiagoLubiana 09 Jan 2021
      inflammatory

      http://www.wikidata.org/entity/Q104746126

    12. TiagoLubiana 09 Jan 2021
      transcriptional signatures

      http://www.wikidata.org/entity/Q104746072

    13. TiagoLubiana 09 Jan 2021
      subsets

      http://www.wikidata.org/entity/Q189118

    14. TiagoLubiana 09 Jan 2021
      cardiac tissue resident macrophage

      http://www.wikidata.org/entity/Q104745975

    15. TiagoLubiana 09 Jan 2021
      kidney

      http://www.wikidata.org/entity/Q9377

    16. TiagoLubiana 09 Jan 2021
      skeletal muscle

      http://www.wikidata.org/entity/Q1048687

    17. TiagoLubiana 09 Jan 2021
      cell-cell interaction

      http://www.wikidata.org/entity/Q5058397

    18. TiagoLubiana 09 Jan 2021
      cell atlas

      http://www.wikidata.org/entity/Q104450703

    19. TiagoLubiana 09 Jan 2021
      cardiac cell

      http://www.wikidata.org/entity/Q66591224

    20. TiagoLubiana 09 Jan 2021
      cardiac cells

      http://www.wikidata.org/entity/Q66591224

    21. TiagoLubiana 09 Jan 2021
      population

      http://www.wikidata.org/entity/Q20088819

    22. TiagoLubiana 09 Jan 2021
      arterial

      http://www.wikidata.org/entity/Q66563437

    23. TiagoLubiana 09 Jan 2021
      capillary

      http://www.wikidata.org/entity/Q66563433

    Visit annotations in context

    Annotators

    URL

    europepmc.org/article/PPR/PPR139645