205 Matching Annotations
  1. Nov 2024
  2. 52.53.155.43 52.53.155.43
    can-24-2248-html.html
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    1. scibot 08 Nov 2024
      RRID:SCR_016366

      DOI: 10.1158/0008-5472.can-24-2248

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    52.53.155.43/cb43348561561308018a10a52d14c612773d9356/can-24-2248-html.html
  3. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    ISWI chromatin remodeling complexes recruit NSD2 and H3K36me2 in pericentromeric heterochromatin
    1
    1. scibot 08 Nov 2024
      RRID:SCR_016366

      DOI: 10.1083/jcb.202310084

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    pmc.ncbi.nlm.nih.gov/articles/PMC11076809/
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Astrocyte allocation during brain development is controlled by Tcf4-mediated fate restriction
    1
    1. scibot 08 Nov 2024
      RRID:SCR_016366

      DOI: 10.1038/s44318-024-00218-x

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    pmc.ncbi.nlm.nih.gov/articles/PMC11535398/
  5. 52.53.155.43 52.53.155.43
    can-24-0529-html.html
    1
    1. scibot 07 Nov 2024
      RRID:SCR_016366

      DOI: 10.1158/0008-5472.can-24-0529

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    52.53.155.43/4faeafb6ce934469a644c8bc705adf42bb41b860/can-24-0529-html.html
  6. Oct 2024
  7. www.sciencedirect.com www.sciencedirect.com
    HOXDeRNA activates a cancerous transcription program and super enhancers via genome-wide binding
    1
    1. scibot 09 Oct 2024
      RRID:SCR_016366

      DOI: 10.1016/j.molcel.2024.09.018

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    sciencedirect.com/science/article/pii/S1097276524007755
  8. aacrjournals.org aacrjournals.org
    H3.3 G34W Promotes Growth and Impedes Differentiation of Osteoblast-Like Mesenchymal Progenitors in Giant Cell Tumor of Bone
    1
    1. scibot 02 Oct 2024
      RRID:SCR_016366

      DOI: 10.1158/2159-8290.CD-20-0461

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    aacrjournals.org/cancerdiscovery/article/10/12/1968/2414/H3-3-G34W-Promotes-Growth-and-Impedes
  9. Sep 2024
  10. www.sciencedirect.com www.sciencedirect.com
    Multiple direct and indirect roles of the Paf1 complex in transcription elongation, splicing, and histone modifications
    1
    1. scibot 10 Sep 2024
      RRID:SCR_016366

      DOI: 10.1016/j.celrep.2024.114730

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    sciencedirect.com/science/article/pii/S2211124724010817
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Detecting Small Cell Transformation in Patients with Advanced EGFR Mutant Lung Adenocarcinoma through Epigenomic cfDNA Profiling
    1
    1. scibot 05 Sep 2024
      RRID:SCR_016366

      DOI: 10.1158/1078-0432.CCR-24-0466

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    ncbi.nlm.nih.gov/pmc/articles/PMC11369616/
  12. Aug 2024
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterizing Relationships between T-cell Inflammation and Outcomes in Patients with High-Risk Neuroblastoma According to Mesenchymal and Adrenergic Signatures
    1
    1. scibot 30 Aug 2024
      RRID:SCR_016366

      DOI: 10.1158/2767-9764.CRC-24-0214

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    ncbi.nlm.nih.gov/pmc/articles/PMC11350481/
  14. www.sciencedirect.com www.sciencedirect.com
    Members of an array of zinc-finger proteins specify distinct Hox chromatin boundaries
    1
    1. scibot 23 Aug 2024
      RRID:SCR_016366

      DOI: 10.1016/j.molcel.2024.08.007

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    sciencedirect.com/science/article/pii/S1097276524006610
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    HLTF resolves G4s and promotes G4-induced replication fork slowing to maintain genome stability
    1
    1. scibot 21 Aug 2024
      RRID:SCR_016366

      DOI: 10.1016/j.molcel.2024.07.018

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    ncbi.nlm.nih.gov/pmc/articles/PMC11366124/
  16. Jul 2024
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZNF397 Deficiency Triggers TET2-Driven Lineage Plasticity and AR-Targeted Therapy Resistance in Prostate Cancer
    2
    1. scibot 31 Jul 2024
      RRID:SCR_016366

      DOI: 10.1158/2159-8290.CD-23-0539

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    2. scibot 31 Jul 2024
      RRID:SCR_016366

      DOI: 10.1158/2159-8290.CD-23-0539

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    ncbi.nlm.nih.gov/pmc/articles/PMC11285331/
  18. www.cell.com www.cell.com
    Innate immune training restores pro-reparative myeloid functions to promote remyelination in the aged central nervous system
    1
    1. scibot 25 Jul 2024
      RRID:SCR_016366

      DOI: 10.1016/j.immuni.2024.07.001

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    cell.com/immunity/fulltext/S1074-7613(24)00348-0
  19. www.sciencedirect.com www.sciencedirect.com
    The primitive endoderm supports lineage plasticity to enable regulative development
    1
    1. scibot 24 Jul 2024
      RRID:SCR_016366

      DOI: 10.1016/j.cell.2024.05.051

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    sciencedirect.com/science/article/pii/S0092867424005956
  20. www.science.org www.science.org
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
    1
    1. scibot 23 Jul 2024
      RRID:SCR_016366

      DOI: 10.1126/sciadv.adk1296

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    science.org/doi/10.1126/sciadv.adk1296
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ALDH1A3-acetaldehyde metabolism potentiates transcriptional heterogeneity in melanoma
    1
    1. scibot 18 Jul 2024
      RRID:SCR_016366

      DOI: 10.1016/j.celrep.2024.114406

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    ncbi.nlm.nih.gov/pmc/articles/PMC11290356/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Effect of Exposure to Neighborhood Violence on Glucocorticoid Receptor Signaling in Lung Tumors
    1
    1. scibot 07 Jul 2024
      RRID:SCR_016366

      DOI: 10.1158/2767-9764.CRC-24-0032

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    ncbi.nlm.nih.gov/pmc/articles/PMC11221527/
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The annotation of GBA1 has been concealed by its protein-coding pseudogene GBAP1
    1
    1. scibot 02 Jul 2024
      RRID:SCR_016366

      DOI: 10.1126/sciadv.adk1296

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    ncbi.nlm.nih.gov/pmc/articles/PMC11204300/
  24. Jun 2024
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    p53 gain-of-function mutation induces metastasis via Brd4-dependent Csf-1 expression
    1
    1. scibot 13 Jun 2024
      RRID:SCR_016366

      DOI: 10.1158/2159-8290.CD-23-0601

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    ncbi.nlm.nih.gov/pmc/articles/PMC10841313/
  26. May 2024
  27. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
    1. scibot 30 May 2024
      RRID:SCR_016366

      DOI: 10.1016/j.cell.2024.04.047

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    2. scibot 30 May 2024
      RRID:SCR_016366

      DOI: 10.1016/j.cell.2024.04.047

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      RRID:SCR_016366
    3. scibot 30 May 2024
      RRID:SCR_016366

      DOI: 10.1016/j.cell.2024.04.047

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    sciencedirect.com/science/article/pii/S0092867424004732
  28. 52.53.155.43 52.53.155.43
    ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF
    2
    1. scibot 29 May 2024
      RRID:SCR_016366

      DOI: 10.1101/2024.03.08.583864

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    2. scibot 29 May 2024
      RRID:SCR_016366

      DOI: 10.1101/2024.03.08.583864

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    52.53.155.43/18a5f967080cacc79c7f5cca9d1b0be744600675/2024.03.08.583864v1.full-html.html
  29. www.sciencedirect.com www.sciencedirect.com
    Osr2 functions as a biomechanical checkpoint to aggravate CD8+ T cell exhaustion in tumor
    2
    1. scibot 14 May 2024
      RRID: SCR_016366

      DOI: 10.1016/j.cell.2024.04.023

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    2. scibot 14 May 2024
      RRID:SCR_016366

      DOI: 10.1016/j.cell.2024.04.023

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    sciencedirect.com/science/article/pii/S0092867424004483
  30. www.sciencedirect.com www.sciencedirect.com
    Transcription factor dynamics, oscillation, and functions in human enteroendocrine cell differentiation
    1
    1. scibot 14 May 2024
      RRID:SCR_016366

      DOI: 10.1016/j.stem.2024.04.015

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    sciencedirect.com/science/article/pii/S1934590924001425
  31. www.sciencedirect.com www.sciencedirect.com
    The MYCN oncoprotein is an RNA-binding accessory factor of the nuclear exosome targeting complex
    1
    1. scibot 07 May 2024
      RRID:SCR_016366

      DOI: 10.1016/j.molcel.2024.04.007

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    sciencedirect.com/science/article/pii/S1097276524002855
  32. www.sciencedirect.com www.sciencedirect.com
    MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons
    1
    1. scibot 02 May 2024
      RRID:SCR_016366

      DOI: 10.1016/j.neuron.2024.04.007

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    sciencedirect.com/science/article/pii/S0896627324002459
  33. Apr 2024
  34. www.sciencedirect.com www.sciencedirect.com
    A senescence restriction point acting on chromatin integrates oncogenic signals
    1
    1. scibot 04 Apr 2024
      RRID:SCR_016366

      DOI: 10.1016/j.celrep.2024.114044

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    sciencedirect.com/science/article/pii/S2211124724003723
  35. Mar 2024
  36. link.springer.com link.springer.com
    From degraded to deciphered: ATAC-seq’s application potential in forensic diagnosis
    1
    1. scibot 19 Mar 2024
      RRID:SCR_016366

      DOI: 10.1007/s00414-024-03206-2

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    link.springer.com/article/10.1007/s00414-024-03206-2
  37. Feb 2024
  38. 52.53.155.43 52.53.155.43
    can-23-1129-html.html
    1
    1. scibot 23 Feb 2024
      RRID:SCR_016366

      DOI: 10.1158/0008-5472.can-23-1129

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    52.53.155.43/f18faff86a38ad159824c95dcf032e1a8bb0e968/133-html.html
  39. www.biorxiv.org www.biorxiv.org
    A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer
    1
    1. scibot 09 Feb 2024
      RRID:SCR_016366

      DOI: 10.1101/2023.12.10.570854

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    biorxiv.org/content/10.1101/2023.12.10.570854v1
  40. genomebiology.biomedcentral.com genomebiology.biomedcentral.com
    The androgen receptor interacts with GATA3 to transcriptionally regulate a luminal epithelial cell phenotype in breast cancer
    1
    1. scibot 07 Feb 2024
      RRID:SCR_016366

      DOI: 10.1186/s13059-023-03161-y

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    genomebiology.biomedcentral.com/articles/10.1186/s13059-023-03161-y
  41. Jan 2024
  42. www.nature.com www.nature.com
    Cell-type-directed design of synthetic enhancers
    1
    1. scibot 25 Jan 2024
      RRID:SCR_016366

      DOI: 10.1038/s41586-023-06936-2

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    nature.com/articles/s41586-023-06936-2
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRDM3/16 Regulate Chromatin Accessibility Required for NKX2-1 Mediated Alveolar Epithelial Differentiation and Function
    1
    1. scibot 20 Jan 2024
      RRID:SCR_016366

      DOI: 10.1101/2023.12.20.570481

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    ncbi.nlm.nih.gov/pmc/articles/PMC10769259/
  44. www.sciencedirect.com www.sciencedirect.com
    Inherited blood cancer predisposition through altered transcription elongation
    1
    1. scibot 19 Jan 2024
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      DOI: 10.1016/j.cell.2023.12.016

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    sciencedirect.com/science/article/pii/S009286742301348X
  45. www.science.org www.science.org
    Temporal landscape of mitochondrial proteostasis governed by the UPRmt
    1
    1. scibot 12 Jan 2024
      RRID: SCR_016366

      DOI: 10.1126/sciadv.adh8228

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    science.org/doi/10.1126/sciadv.adh8228
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    β-catenin-driven differentiation is a tissue-specific epigenetic vulnerability in adrenal cancer
    1
    1. scibot 10 Jan 2024
      RRID:SCR_016366

      DOI: 10.1158/0008-5472.CAN-22-2712

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    ncbi.nlm.nih.gov/pmc/articles/PMC10330305/
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multi-omics integration identifies cell-state-specific repression by PBRM1-PIAS1 cooperation
    1
    1. scibot 06 Jan 2024
      RRID: SCR_016366

      DOI: 10.1016/j.xgen.2023.100471

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    ncbi.nlm.nih.gov/pmc/articles/PMC10794847/
  48. www.sciencedirect.com www.sciencedirect.com
    Mitochondrial isocitrate dehydrogenase impedes CAR T cell function by restraining antioxidant metabolism and histone acetylation
    1
    1. scibot 06 Jan 2024
      RRID:SCR_016366

      DOI: 10.1016/j.cmet.2023.12.010

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    sciencedirect.com/science/article/pii/S1550413123004618
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging tissue-specific enhancer-target gene regulatory networks identifies enhancer somatic mutations that functionally impact lung cancer
    1
    1. scibot 05 Jan 2024
      RRID:SCR_016366

      DOI: 10.1158/0008-5472.CAN-23-1129

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  50. Dec 2023
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    Pluripotency state transition of embryonic stem cells requires the turnover of histone chaperone FACT on chromatin
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    Blimp-1 and c-Maf regulate  Il10 and negatively regulate common and unique proinflammatory gene networks in IL-12 plus IL-27-driven T helper-1 cells
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    Single-cell transcriptomics of human traumatic brain injury reveals activation of endogenous retroviruses in oligodendroglia
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  55. Nov 2023
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    Selective inhibition of CDK9 in triple negative breast cancer
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    Repression of LSD1 potentiates homologous recombination-proficient ovarian cancer to PARP inhibitors through down-regulation of BRCA1/2 and RAD51
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    LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
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    Blimp-1 and c-Maf regulate Il10 and negatively regulate common and unique proinflammatory gene networks in IL-12 plus IL-27-driven T helper-1 cells
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  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
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    Active maintenance of CD8+ T cell naivety through regulation of global genome architecture
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  62. Oct 2023
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    Loss of succinyl-CoA synthetase in mouse forebrain results in hypersuccinylation with perturbed neuronal transcription and metabolism
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    Three-dimensional genome architecture coordinates key regulators of lineage specification in mammary epithelial cells
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    Super-enhancer hijacking drives ectopic expression of hedgehog pathway ligands in meningiomas
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    TET2 lesions enhance the aggressiveness of CEBPA-mutant acute myeloid leukemia by rebalancing GATA2 expression
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  67. Sep 2023
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    Temporal landscape of mitochondrial proteostasis governed by the UPRmt
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  69. Aug 2023
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    Homeostatic PD-1 signaling restrains EOMES-dependent oligoclonal expansion of liver-resident CD8 T cells
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  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Histone variants shape chromatin states in Arabidopsis
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    Inhibition of DNMT1 methyltransferase activity via glucose-regulated O-GlcNAcylation alters the epigenome
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  73. Jul 2023
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    Low-level repressive histone marks fine-tune gene transcription in neural stem cells
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  75. Jun 2023
  76. 52.53.155.43 52.53.155.43
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    DOT1L bridges transcription and heterochromatin formation at mammalian pericentromeres
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    5-Azacytidine- and retinoic-acid-induced reprogramming of DCCs into dormancy suppresses metastasis via restored TGF-β-SMAD4 signaling
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  79. May 2023
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    KMT2D Deficiency Promotes Myeloid Leukemias which Is Vulnerable to Ribosome Biogenesis Inhibition
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    L1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
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    Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters
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  83. Apr 2023
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    A hyper-quiescent chromatin state formed during aging is reversed by regeneration
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    Novel enhancers conferring compensatory transcriptional regulation of Nkx2-5 in heart development
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    INTAC endonuclease and phosphatase modules differentially regulate transcription by RNA polymerase II
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    Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia
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    Active maintenance of CD8+ T cell naïvety through regulation of global genome architecture
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    Histone phosphorylation integrates the hepatic glucagon-PKA-CREB gluconeogenesis program in response to fasting
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  90. Mar 2023
  91. europepmc.org europepmc.org
    Epigenetic dosage identifies two major and functionally distinct β cell subtypes
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    Stepwise activities of mSWI/SNF family chromatin remodeling complexes direct T cell activation and exhaustion
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    Expression of down-regulated ERV LTR elements associates with immune activation in human small-cell lung cancers
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  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MeCP2 regulates Gdf11, a dosage-sensitive gene critical for neurological function
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  95. Feb 2023
  96. link.springer.com link.springer.com
    The BRD4 inhibitor JQ1 augments the antitumor efficacy of abemaciclib in preclinical models of gastric carcinoma
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    Loss of PBRM1 alters promoter histone modifications and activates ALDH1A1 to drive renal cell carcinoma
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  98. Jan 2023
  99. www.sciencedirect.com www.sciencedirect.com
    Centromeres as universal hotspots of DNA breakage, driving RAD51-mediated recombination during quiescence
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    Stem cell plasticity, acetylation of H3K14, and de novo gene activation rely on KAT7
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    PRC2 Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1 Targeted Therapy via Enhanced Viral Mimicry
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  102. Dec 2022
  103. aacrjournals.org aacrjournals.org
    BAF complex maintains glioma stem cells in pediatric H3K27M-glioma
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  104. Nov 2022
  105. www.sciencedirect.com www.sciencedirect.com
    Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation
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    Essential role of MESP1-RING1A complex in cardiac differentiation
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    Transcription factor antagonism regulates heterogeneity in embryonic stem cell states
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  108. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    BioViz Connect: Web Application Linking CyVerse Cloud Resources to Genomic Visualization in the Integrated Genome Browser
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  109. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits
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      DOI: 10.1158/0008-5472.CAN-22-0671

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  110. Sep 2022
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    Acquired semi-squamatization during chemotherapy suggests differentiation as a therapeutic strategy for bladder cancer
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    STAG2 promotes the myelination transcriptional program in oligodendrocytes
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    The human mitochondrial genome contains a second light strand promoter
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  114. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
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  115. Aug 2022
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    Npas3 deficiency impairs cortical astrogenesis and induces autistic-like behaviors
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    SMNDC1 links chromatin remodeling and splicing to regulate pancreatic hormone expression
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  118. 52.53.155.43 52.53.155.43
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    TOP1 CAD-seq: A protocol to map catalytically engaged topoisomerase 1 in human cells
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    Transcription Elongation Machinery Is a Druggable Dependency and Potentiates Immunotherapy in Glioblastoma Stem Cells
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  121. Jun 2022
  122. 52.53.155.43 52.53.155.43
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  123. www.nature.com www.nature.com
    KMT2C deficiency promotes small cell lung cancer metastasis through DNMT3A-mediated epigenetic reprogramming
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  124. www.sciencedirect.com www.sciencedirect.com
    Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine
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    JAZF1-SUZ12 dysregulates PRC2 function and gene expression during cell differentiation
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  126. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Oct4 differentially regulates chromatin opening and enhancer transcription in pluripotent stem cells
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  127. May 2022
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    Intracellular infection and immune system cues rewire adipocytes to acquire immune function
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  129. Apr 2022
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    RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex
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    An adult-stage transcriptional program for survival of serotonergic connectivity
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    HNF4A modulates glucocorticoid action in the liver
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  133. aacrjournals.org aacrjournals.org
    GFI1 cooperates with IKZF1/IKAROS to activate gene expression in T-cell acute lymphoblastic leukemia
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      DOI: 10.1158/1541-7786.MCR-21-0352

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  134. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Presence of H3K4me3 on Paternally Expressed Genes of the Paternal Genome From Sperm to Implantation
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      DOI: 10.3389/fcell.2022.838684

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  135. Mar 2022
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    A test of the pioneer factor hypothesis using ectopic liver gene activation
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      DOI: 10.7554/eLife.73358

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  137. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZFTA-RELA Dictates Oncogenic Transcriptional Programs to Drive Aggressive Supratentorial Ependymoma
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    Metabolic incorporation of electron-rich ribonucleosides enhances APEX-seq for profiling spatially restricted nascent transcriptome
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      DOI: 10.1016/j.chembiol.2022.02.005

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  139. Feb 2022
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    Simultaneous cellular and molecular phenotyping of embryonic mutants using single-cell regulatory trajectories
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    SPARCLE, a p53-induced lncRNA, controls apoptosis after genotoxic stress by promoting PARP-1 cleavage
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  142. Jan 2022
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    Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration
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    Establishment of developmental gene silencing by ordered polycomb complex recruitment in early zebrafish embryos
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    Multimodal regulatory elements within a hormone-specific super enhancer control a heterogeneous transcriptional response
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    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
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      DOI: 10.3390/cells11010028

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  147. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells
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  148. Dec 2021
  149. www.sciencedirect.com www.sciencedirect.com
    piRNAs initiate transcriptional silencing of spermatogenic genes during C. elegans germline development
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  150. www.cell.com www.cell.com
    MYC assembles and stimulates topoisomerases 1 and 2 in a “topoisome”
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  151. Nov 2021
  152. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An epigenetic mechanism underlying chromosome 17p deletion-driven tumorigenesis
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    Topoisomerase 1 activity during mitotic transcription favors the transition from mitosis to G1
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    Acsbg1-dependent mitochondrial fitness is a metabolic checkpoint for tissue Treg cell homeostasis
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    Identification of a novel FUS/ETV4 fusion and comparative analysis with other Ewing sarcoma fusion proteins
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    Epigenomic and transcriptional profiling identifies impaired glyoxylate detoxification in NAFLD as a risk factor for hyperoxaluria
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    PI3K Inhibition Activates SGK1 via a Feedback Loop to Promote Chromatin-Based Regulation of ER-Dependent Gene Expression
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    BET Inhibition Induces HEXIM1- and RAD51-Dependent Conflicts between Transcription and Replication
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    Deregulated Expression of Mammalian lncRNA through Loss of SPT6 Induces R-Loop Formation, Replication Stress, and Cellular Senescence
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    Targeted protein degradation reveals a direct role of SPT6 in RNAPII elongation and termination
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  183. May 2021
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    Repetitive Elements Trigger RIG-I-like Receptor Signaling that Regulates the Emergence of Hematopoietic Stem and Progenitor Cells
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    A Prion-like Domain in Transcription Factor EBF1 Promotes Phase Separation and Enables B Cell Programming of Progenitor Chromatin
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    Chromatin Accessibility Dynamics and a Hierarchical Transcriptional Regulatory Network Structure for Plant Somatic Embryogenesis
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    Self-Reporting Transposons Enable Simultaneous Readout of Gene Expression and Transcription Factor Binding in Single Cells
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    Impact of chromatin context on Cas9-induced DNA double-strand break repair pathway balance
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    Human ORC/MCM density is low in active genes and correlates with replication time but does not delimit initiation zones
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  196. Feb 2021
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    Beta-catenin signaling regulates barrier-specific gene expression in circumventricular organ and ocular vasculatures
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    The corepressors GPS2 and SMRT control enhancer and silencer remodeling via eRNA transcription during inflammatory activation of macrophages
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    Dimerisation of the PICTS complex via LC8/Cut-up drives co-transcriptional transposon silencing in Drosophila
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    Protocol for assaying chromatin accessibility using ATAC-seq in plants
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    Re-expression of SMARCA4/BRG1 in small cell carcinoma of ovary, hypercalcemic type (SCCOHT) promotes an epithelial-like gene signature through an AP-1-dependent mechanism
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    Binding of the Treslin-MTBP Complex to Specific Regions of the Human Genome Promotes the Initiation of DNA Replication
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    Amplification of a broad transcriptional program by a common factor triggers the meiotic cell cycle in mice
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    Parvovirus Minute Virus of Mice Interacts with Sites of Cellular DNA Damage to Establish and Amplify its Lytic Infection
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    The testis protein ZNF165 is a SMAD3 cofactor that coordinates oncogenic TGFβ signaling in triple-negative breast cancer
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    INO80C Remodeler Maintains Genomic Stability by Preventing Promiscuous Transcription at Replication Origins
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    Genomic Rewiring of SOX2 Chromatin Interaction Network during Differentiation of ESCs to Postmitotic Neurons
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    Repressive H3K9me2 protects lifespan against the transgenerational burden of COMPASS activity in C. elegans
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    Umbilical cord blood-derived ILC1-like cells constitute a novel precursor for mature KIR+NKG2A- NK cells
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    Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains
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    Sphingosine 1-phosphate-regulated transcriptomes in heterogenous arterial and lymphatic endothelium of the aorta
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    Analysis of zebrafish periderm enhancers facilitates identification of a regulatory variant near human KRT8/18
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    CoBATCH for High-Throughput Single-Cell Epigenomic Profiling
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    The Ovulatory Signal Precipitates LRH-1 Transcriptional Switching Mediated by Differential Chromatin Accessibility
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    RNA Interactions Are Essential for CTCF-Mediated Genome Organization
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    Tau-Mediated Disruption of the Spliceosome Triggers Cryptic RNA Splicing and Neurodegeneration in Alzheimer’s Disease
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    Genome-wide Analyses of Chromatin State in Human Mast Cells Reveal Molecular Drivers and Mediators of Allergic and Inflammatory Diseases
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    Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapa
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    Recurrent SMARCB1 Mutations Reveal a Nucleosome Acidic Patch Interaction Site That Potentiates mSWI/SNF Complex Chromatin Remodeling
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    Quantification of Differential Transcription Factor Activity and Multiomics-Based Classification into Activators and Repressors: diffTF
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    Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF
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    Yeast Sirtuin Family Members Maintain Transcription Homeostasis to Ensure Genome Stability
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    De Novo PITX1 Expression Controls Bi-Stable Transcriptional Circuits to Govern Self-Renewal and Differentiation in Squamous Cell Carcinoma
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  238. Nov 2018
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    Elongation/Termination Factor Exchange Mediated by PP1 Phosphatase Orchestrates Transcription Termination
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    HOXA9 Reprograms the Enhancer Landscape to Promote Leukemogenesis
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    Transcription Factors Drive Tet2-Mediated Enhancer Demethylation to Reprogram Cell Fate
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