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Jan 2023
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Improved ANAP incorporation and VCF analysis reveal details of P2X7 current facilitation and a limited conformational interplay between ATP binding and the intracellular ballast domain

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SSRN-id4221334-html.html

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Canagliflozin promotes osteoblastic MC3T3-E1 differentiation via AMPK/RUNX2 and improves bone microarchitecture in type 2 diabetic mice

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ncbi.nlm.nih.gov/pmc/articles/PMC9800613/
Dec 2022
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Critical roles for ‘housekeeping’ nucleases in type III CRISPR-Cas immunity

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Membrane curvature sensing and stabilization by the autophagic LC3 lipidation machinery

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Structures of drug-specific monoclonal antibodies bound to opioids and nicotine reveal a common mode of binding

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Nov 2022
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Structure of a TOC-TIC supercomplex spanning two chloroplast envelope membranes

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Neutralizing monoclonal antibodies elicited by mosaic RBD nanoparticles bind conserved sarbecovirus epitopes

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IL-17-induced dimerization of IL-17RA drives the formation of the IL-17 signalosome to potentiate signaling

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Mitoguardin-2–mediated lipid transfer preserves mitochondrial morphology and lipid droplet formation

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Human WDR5 promotes breast cancer growth and metastasis via KMT2-independent translation regulation

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Sep 2022
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Aminomethanesulfonic acid illuminates the boundary between full and partial agonists of the pentameric glycine receptor

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Methyltransferases of Riboviria

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Aug 2022
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Protocol to identify host-viral protein interactions between coagulation-related proteins and their genetic variants with SARS-CoV-2 proteins

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Protocol to study the oligomeric organization of single-span transmembrane peptides using molecular dynamics simulations

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Structure of a fully assembled tumor-specific T cell receptor ligated by pMHC

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Vision-related convergent gene losses reveal SERPINE3’s unknown role in the eye

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Emergence of immune escape at dominant SARS-CoV-2 killer T-cell epitope

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Jul 2022
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Comprehensive fitness landscape of SARS-CoV-2 Mpro reveals insights into viral resistance mechanisms

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BPS Publications

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bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15913
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Dynamics of allosteric regulation of the phospholipase C-γ isozymes upon recruitment to membranes

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Inhibition of histone H3-H4 chaperone pathways rescues C. elegans sterility by H2B loss

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Rational exploration of fold atlas for human solute carrier proteins

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cell.com/structure/fulltext/S0969-2126(22)00189-7
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The time-zero HSQC method improves the linear free energy relationship of a polypeptide chain through the accurate measurement of residue-specific equilibrium constants

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Structural basis for RNA surveillance by the human nuclear exosome targeting (NEXT) complex

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Mussel-inspired monomer – A new selective protease inhibitor against dentine collagen degradation

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A basement membrane discovery pipeline uncovers network complexity, regulators, and human disease associations

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Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

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Aβ-induced synaptic impairments require CaMKII activity that is stimulated by indirect signaling events

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The Bradycardic Agent Ivabradine Acts as an Atypical Inhibitor of Voltage-Gated Sodium Channels

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Broad and ultra-potent cross-clade neutralization of HIV-1 by a vaccine-induced CD4 binding site bovine antibody

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Whole genome sequencing identifies a deletion mutation in the unknown-functional KCNG2 from familial sick sinus syndrome

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BPS Publications

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BPS Publications

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  DOI: 10.1111/bph.15841
  
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Basis for drug selectivity of plasmepsin IX and X inhibition in Plasmodium falciparum and vivax

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RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex

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Structure of the poxvirus decapping enzyme D9 reveals its mechanism of cap recognition and catalysis

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Ligand-independent oligomerization of TACI is controlled by the transmembrane domain and regulates proliferation of activated B cells

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Asymmetric and non-stoichiometric glycoprotein recognition by two distinct antibodies results in broad protection against ebolaviruses

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Binding blockade between TLN1 and integrin β1 represses triple-negative breast cancer

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Phosphosite-dependent Presentation of Dual Phosphorylated Peptides by MHC Class I Molecules

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Structural basis for an unprecedented enzymatic alkylation in cylindrocyclophane biosynthesis

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Structural basis of nanobodies neutralizing SARS-CoV-2 variants

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Crystals of TELSAM–target protein fusions that exhibit minimal crystal contacts and lack direct inter-TELSAM contacts

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Structural basis for the catalytic activity of filamentous human serine beta-lactamase-like protein LACTB

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Structure and ion-release mechanism of PIB-4-type ATPases

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Structural insights into DNMT5-mediated ATP-dependent high-fidelity epigenome maintenance

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Structures of SAS-6 coiled coil hold implications for the polarity of the centriolar cartwheel

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Receptor tyrosine kinases regulate signal transduction through a liquid-liquid phase separated state

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Structural basis for catalyzed assembly of the Sonic hedgehog–Patched1 signaling complex

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Cdc6 is sequentially regulated by PP2A-Cdc55, Cdc14, and Sic1 for origin licensing in S. cerevisiae

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The light chain of the L9 antibody is critical for binding circumsporozoite protein minor repeats and preventing malaria

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Naegleria’s mitotic spindles are built from unique tubulins and highlight core spindle features

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Structural basis of Plasmodium vivax inhibition by antibodies binding to the circumsporozoite protein repeats

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Florigen and its homologs of FT/CETS/PEBP/RKIP/YbhB family may be the enzymes of small molecule metabolism: review of the evidence

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Structural basis of bacteriophage lambda capsid maturation

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Novel variants underlying autosomal recessive neurodevelopmental disorders with intellectual disability in Iranian consanguineous families

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Neurotoxin-mediated potent activation of the axon degeneration regulator SARM1

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Calcium-dependent ESCRT recruitment and lysosome exocytosis maintain epithelial integrity during Candida albicans invasion

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Conformational dynamics of auto-inhibition in the ER calcium sensor STIM1

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Molecular features underlying differential SHP1/SHP2 binding of immune checkpoint receptors

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Paratope states in solution improve structure prediction and docking

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Orchestrated actin nucleation by the Candida albicans polarisome complex enables filamentous growth

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Structure and assembly pattern of a freshwater short-tailed cyanophage Pam1

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Conserved heterodimeric GTPase Rbg1/Tma46 promotes efficient translation in eukaryotic cells

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Structural mechanisms of assembly, permeation, gating, and pharmacology of native human rod CNG channel

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Structural insights into the cis and trans assembly of human trophoblast cell surface antigen 2

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A novel receptor for platelet-activating factor and lysophosphatidylcholine in Trypanosoma cruzi

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TPRG1-AS1 induces RBM24 expression and inhibits liver cancer progression by sponging miR-4691-5p and miR-3659

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Andrographolide prevents bone loss via targeting ERRalpha-regulated metabolic adaption of osteoclastogenesis

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Expression and distribution of synaptotagmin family members in the zebrafish retina

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Structural characterization of NrnC identifies unifying features of dinucleotidases

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The Arg-293 of Cryptochrome1 is responsible for the allosteric regulation of CLOCK-CRY1 binding in circadian rhythm

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Molecular basis of C-S bond cleavage in the glycyl radical enzyme isethionate sulfite-lyase

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Structural insights into the activation of human calcium-sensing receptor

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TMEM120A contains a specific coenzyme A-binding site and might not mediate poking- or stretch-induced channel activities in cells

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Structural basis for membrane recruitment of ATG16L1 by WIPI2 in autophagy

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A molecular sensor determines the ubiquitin substrate specificity of SARS-CoV-2 papain-like protease

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Atypical TNF-TNFR superfamily binding interface in the GITR-GITRL complex for T cell activation

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Broad cross-reactivity across sarbecoviruses exhibited by a subset of COVID-19 donor-derived neutralizing antibodies

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Regulation of human mTOR complexes by DEPTOR

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A complete Protocadherin-19 ectodomain model for evaluating epilepsy-causing mutations and potential protein interaction sites

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Shigella ubiquitin ligase IpaH7.8 targets gasdermin D for degradation to prevent pyroptosis and enable infection

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Simulating PIP2-Induced Gating Transitions in Kir6.2 Channels

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TMEM120A is a coenzyme A-binding membrane protein with structural similarities to ELOVL fatty acid elongase

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McsB forms a gated kinase chamber to mark aberrant bacterial proteins for degradation

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An Insilico evaluation of phytocompounds from Albizia amara and Phyla nodiflora as cyclooxygenase-2 enzyme inhibitors

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Structure of Escherichia coli respiratory complex I reconstituted into lipid nanodiscs reveals an uncoupled conformation

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Global donor and acceptor splicing site kinetics in human cells

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Collection of Continuous Rotation MicroED Data from Ion Beam-Milled Crystals of Any Size

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Target DNA bending by the Mu transpososome promotes careful transposition and prevents its reversal

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Fcab-HER2 Interaction: a Ménage à Trois. Lessons from X-Ray and Solution Studies

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Structure and analysis of nanobody binding to the human ASIC1a ion channel

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Crystal structure of a human plasma membrane phospholipid flippase

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Genetically incorporated crosslinkers reveal NleE attenuates host autophagy dependent on PSMD10

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Structures of translationally inactive mammalian ribosomes

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Identification of an allosteric binding site on the human glycine transporter, GlyT2, for bioactive lipid analgesics

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Helicase-Dependent RNA Decay Illuminated by a Cryo-EM Structure of a Human Nuclear RNA Exosome-MTR4 Complex

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The HCN domain couples voltage gating and cAMP response in hyperpolarization-activated cyclic nucleotide-gated channels

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Regulation of the endosomal SNX27-retromer by OTULIN

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Structure of the thermo-sensitive TRP channel TRP1 from the alga Chlamydomonas reinhardtii

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Vaccination with Glycan-Modified HIV NFL Envelope Trimer-Liposomes Elicits Broadly Neutralizing Antibodies to Multiple Sites of Vulnerability

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Structural Definition of a Neutralization-Sensitive Epitope on the MERS-CoV S1-NTD

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ABCE1 Controls Ribosome Recycling by an Asymmetric Dynamic Conformational Equilibrium

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Symmetry transitions during gating of the TRPV2 ion channel in lipid membranes

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Pentapeptide Protects INS-1 Cells From hIAPP-Mediated Apoptosis by Enhancing Autophagy Through mTOR Pathway

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Mechanism of pharmacochaperoning in a mammalian KATP channel revealed by cryo-EM

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Structure of the Mechanosensitive Channel MscS Embedded in the Membrane Bilayer

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Molecular docking predictions of fragrance binding to human leukocyte antigen molecules

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Structural Basis for the Inhibitory Effects of Ubistatins in the Ubiquitin-Proteasome Pathway

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STING Polymer Structure Reveals Mechanisms for Activation, Hyperactivation, and Inhibition

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Site-Selective Antibody Functionalization via Orthogonally Reactive Arginine and Lysine Residues

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Structural Basis of CD160:HVEM Recognition

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A twist defect mechanism for ATP-dependent translocation of nucleosomal DNA

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Untitled document

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An NAD+ Phosphorylase Toxin Triggers Mycobacterium tuberculosis Cell Death

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Broadly Neutralizing Antibody Mediated Clearance of Human Hepatitis C Virus Infection

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Structures of translationally inactive mammalian ribosomes

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Inhibition of the chimeric DnaJ‐PKAc enzyme by endogenous inhibitor proteins

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Therapeutic Monoclonal Antibodies for Ebola Virus Infection Derived from Vaccinated Humans

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A Structural Change in Butyrophilin upon Phosphoantigen Binding Underlies Phosphoantigen-Mediated Vγ9Vδ2 T Cell Activation

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A Bacterial Expression Platform for Production of Therapeutic Proteins Containing Human-like O-Linked Glycans

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Homer Tetramer Promotes Actin Bundling Activity of Drebrin

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Mechanisms for Zinc and Proton Inhibition of the GluN1/GluN2A NMDA Receptor

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Cross-Reactive Donor-Specific CD8+ Tregs Efficiently Prevent Transplant Rejection

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A Mutation Directs the Structural Switch of DNA Binding Proteins under Starvation to a Ferritin-like Protein Cage

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The Preprotein Binding Domain of SecA Displays Intrinsic Rotational Dynamics

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Structural Survey of Broadly Neutralizing Antibodies Targeting the HIV-1 Env Trimer Delineates Epitope Categories and Characteristics of Recognition

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Neuron-Subtype-Specific Expression, Interaction Affinities, and Specificity Determinants of DIP/Dpr Cell Recognition Proteins

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Germline VRC01 antibody recognition of a modified clade C HIV-1 envelope trimer and a glycosylated HIV-1 gp120 core

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Structural Basis for Cholesterol Transport-like Activity of the Hedgehog Receptor Patched

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A Bifunctional Role for the UHRF1 UBL Domain in the Control of Hemi-methylated DNA-Dependent Histone Ubiquitylation

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Actionable Activating Oncogenic ERBB2/HER2 Transmembrane and Juxtamembrane Domain Mutations

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Structural and mechanistic investigations of protein S-glycosyltransferases

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Single-channel properties, sugar specificity, and role of chitoporin in adaptive survival of Vibrio cholerae type strain O1

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Repurposing the antidepressant sertraline as SHMT inhibitor to suppress serine/glycine synthesis addicted breast tumor growth

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Degradation of the microbial stress protectants and chemical chaperones ectoine and hydroxyectoine by a bacterial hydrolase–deacetylase complex

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Structural basis for the constitutive activity and immunomodulatory properties of the Epstein-Barr virus-encoded G protein-coupled receptor BILF1

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Identification of an atypical interaction site in the BTB domain of the MYC-interacting zinc-finger protein 1

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Co-occurring gain-of-function mutations in HER2 and HER3 modulate HER2/HER3 activation, oncogenesis, and HER2 inhibitor sensitivity

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Structural basis for recruitment of the CHK1 DNA damage kinase by the CLASPIN scaffold protein

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Myoglobin primary structure reveals multiple convergent transitions to semi-aquatic life in the world's smallest mammalian divers

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Bacterial death and TRADD-N domains help define novel apoptosis and immunity mechanisms shared by prokaryotes and metazoans

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Spatially Enriched Paralog Rearrangements Argue Functionally Diverse Ribosomes Arise during Cold Acclimation in Arabidopsis

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Voltage-clamp fluorometry analysis of structural rearrangements of ATP-gated channel P2X2 upon hyperpolarization

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Pore mutation N617D in the skeletal muscle DHPR blocks Ca2+ influx due to atypical high-affinity Ca2+ binding

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Distinct expression requirements and rescue strategies for BEST1 loss- and gain-of-function mutations

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Evidence of escape of SARS-CoV-2 variant B.1.351 from natural and vaccine-induced sera

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Molecular insights into substrate recognition and discrimination by the N-terminal domain of Lon AAA+ protease

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Structural determinants of voltage-gating properties in calcium channels

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Identification of uncharacterized components of prokaryotic immune systems and their diverse eukaryotic reformulations

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The Polyglutamine Expansion at the N-Terminal of Huntingtin Protein Modulates the Dynamic Configuration and Phosphorylation of the C-Terminal HEAT Domain

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Structure-Based Mechanisms of a Molecular RNA Polymerase/Chaperone Machine Required for Ribosome Biosynthesis

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Homogeneous Oligomers of Pro-apoptotic BAX Reveal Structural Determinants of Mitochondrial Membrane Permeabilization

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Functional convergence of a germline-encoded neutralizing antibody response in rhesus macaques immunized with HCV envelope glycoproteins

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Comprehensive analysis of genomic alterations, clinical outcomes, putative functions and potential therapeutic value of MMP11 in human breast cancer

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Distinct Cation Gradients Power Cholesterol Transport at Different Key Points in the Hedgehog Signaling Pathway

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Diverse immunoglobulin gene usage and convergent epitope targeting in neutralizing antibody responses to SARS-CoV-2

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Signatures of antagonistic pleiotropy in a bacterial flagellin epitope

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Structural insights into viral RNA capping and plasma membrane targeting by Chikungunya virus nonstructural protein 1

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Pathological polyQ expansion does not alter the conformation of the Huntingtin-HAP40 complex

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Defining and Manipulating B Cell Immunodominance Hierarchies to Elicit Broadly Neutralizing Antibody Responses against Influenza Virus

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A combination of cross-neutralizing antibodies synergizes to prevent SARS-CoV-2 and SARS-CoV pseudovirus infection

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Investigating GIPR (ant)agonism: A structural analysis of GIP and its receptor

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Structures of the MHC-I molecule BF2*1501 disclose the preferred presentation of an H5N1 virus-derived epitope

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Antibody evasion by the P.1 strain of SARS-CoV-2

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ncbi.nlm.nih.gov/pmc/articles/PMC8008340/
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Cellular mRNA triggers structural transformation of Ebola virus matrix protein VP40 to its essential regulatory form

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1. scibot 14 Apr 2021
  
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  DOI: 10.1016/j.celrep.2021.108986
  
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sciencedirect.com/science/article/pii/S2211124721003004
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A nexus of intrinsic dynamics underlies translocase priming

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1. scibot 14 Apr 2021
  
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  DOI: 10.1016/j.str.2021.03.015
  
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sciencedirect.com/science/article/pii/S0969212621001131
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Functional interrogation of DNA damage response variants with base editing screens

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1. scibot 12 Apr 2021
  
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  DOI: 10.1016/j.cell.2021.01.041
  
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sciencedirect.com/science/article/pii/S0092867421000842
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Characterization of a novel mCH3 conjugated anti-PcrV scFv molecule

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1. scibot 06 Apr 2021
  
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  DOI: 10.1038/s41598-021-86491-w
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8010009/
Mar 2021
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Structure and immune recognition of the porcine epidemic diarrhea virus spike protein

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1. scibot 21 Mar 2021
  
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  DOI: 10.1016/j.str.2020.12.003
  
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cell.com/structure/fulltext/S0969-2126(20)30470-6
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Microglial trogocytosis and the complement system regulate axonal pruning in vivo

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1. scibot 20 Mar 2021
  
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  DOI: 10.7554/eLife.62167
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7963485/
bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com

BPS Publications

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1. scibot 13 Mar 2021
  
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  DOI: 10.1111/bph.15357
  
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bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15357
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Integrative identification of the pathogenic role of a novel G6PD missense mutation c.697G>C

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1. scibot 13 Mar 2021
  
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  DOI: 10.21037/atm-20-3941
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7940930/
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Mitochondrial copper and phosphate transporter specificity was defined early in the evolution of eukaryotes

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1. scibot 09 Mar 2021
  
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  DOI: 10.7554/eLife.64690
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7924939/
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Human polymorphisms in GSDMD alter the inflammatory response

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1. scibot 09 Mar 2021
  
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  RRID:SCR_000305
  
  DOI: 10.1074/jbc.RA119.010604
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7062166/
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A synthetic diterpene analogue inhibits mycobacterial persistence and biofilm formation by targeting (p)ppGpp synthetases

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1. scibot 08 Mar 2021
  
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  DOI: 10.1016/j.chembiol.2021.01.018
  
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A pentameric protein ring with novel architecture is required for herpesviral packaging

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1. scibot 02 Mar 2021
  
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  DOI: 10.7554/eLife.62261
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7889075/
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Structural basis for self-cleavage prevention by tag:anti-tag pairing complementarity in type VI Cas13 CRISPR systems

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1. scibot 01 Mar 2021
  
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  DOI: 10.1016/j.molcel.2020.12.033
  
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sciencedirect.com/science/article/pii/S1097276520309540

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