560 Matching Annotations
  1. Apr 2023
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SWI/SNF Blockade Disrupts PU.1-Directed Enhancer Programs in Normal Hematopoietic Cells and Acute Myeloid Leukemia
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    ncbi.nlm.nih.gov/pmc/articles/PMC10071820/
  3. Mar 2023
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ViReMa: a virus recombination mapper of next-generation sequencing data characterizes diverse recombinant viral nucleic acids
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10025937/
  6. www.sciencedirect.com www.sciencedirect.com
    A central chaperone-like role for 14-3-3 proteins in human cells
    1
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    sciencedirect.com/science/article/pii/S1097276523001211
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MeCP2 regulates Gdf11, a dosage-sensitive gene critical for neurological function
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9977283/
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of a giant (trevally): Caranx ignobilis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694125/
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale assembly of the highly heterozygous genome of red clover (Trifolium pratense L.), an allogamous forage crop species
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650271/
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first complete mitochondrial genome of Diadema antillarum (Diadematoida, Diadematidae)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693923/
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    svaRetro and svaNUMT: modular packages for annotating retrotransposed transcripts and nuclear integration of mitochondrial DNA in genome sequencing data
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694029/
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  13. Feb 2023
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  15. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
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    sciencedirect.com/science/article/pii/S0888754323000265
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide epigenetic and mRNA-expression profiling followed by CRISPR/Cas9-mediated gene-disruptions corroborate the MIR141/MIR200C-ZEB1/ZEB2-FGFR1 axis in acquired EMT-associated EGFR TKI-resistance in NSCLC cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9903082/
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of PBRM1 alters promoter histone modifications and activates ALDH1A1 to drive renal cell carcinoma
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9357026/
  18. Jan 2023
  19. www.sciencedirect.com www.sciencedirect.com
    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
    1
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    sciencedirect.com/science/article/pii/S2666379123000058
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9827110/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC2 Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1 Targeted Therapy via Enhanced Viral Mimicry
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9437570/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative Genomics Provides Etiologic and Biological Insight into Melanoma Subtypes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9716259/
  23. Dec 2022
  24. aacrjournals.org aacrjournals.org
    BAF complex maintains glioma stem cells in pediatric H3K27M-glioma
    1
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    aacrjournals.org/cancerdiscovery/article/12/12/2880/711164/BAF-Complex-Maintains-Glioma-Stem-Cells-in
  25. Nov 2022
  26. www.sciencedirect.com www.sciencedirect.com
    Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation
    1
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    sciencedirect.com/science/article/abs/pii/S1097276522010644
  27. www.sciencedirect.com www.sciencedirect.com
    Reconstructing mutational lineages in breast cancer by multi-patient-targeted single-cell DNA sequencing
    1
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    sciencedirect.com/science/article/pii/S2666979X22001689
  28. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac106/6780308
  29. Oct 2022
  30. www.sciencedirect.com www.sciencedirect.com
    A cis-regulatory lexicon of DNA motif combinations mediating cell-type-specific gene regulation
    1
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    sciencedirect.com/science/article/pii/S2666979X22001409
  31. Sep 2022
  32. www.sciencedirect.com www.sciencedirect.com
    FOXA1 regulates alternative splicing in prostate cancer
    1
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    sciencedirect.com/science/article/pii/S2211124722012414
  33. www.sciencedirect.com www.sciencedirect.com
    A small proportion of X-linked genes contribute to X chromosome upregulation in early embryos via BRD4-mediated transcriptional activation
    1
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    sciencedirect.com/science/article/pii/S0960982222013811
  34. www.sciencedirect.com www.sciencedirect.com
    The human mitochondrial genome contains a second light strand promoter
    1
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    sciencedirect.com/science/article/pii/S109727652200764X
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8904296/
  36. Aug 2022
  37. 52.53.155.43 52.53.155.43
    cd-21-1671-html.html
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    52.53.155.43/5e67ddaf80a7b90ec85c4b24452e48b76eabacbf/cd-21-1671-html.html
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Adrenergic receptor signaling induced by Klf15, a regulator of regeneration enhancer, promotes kidney reconstruction
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9388080/
  39. www.sciencedirect.com www.sciencedirect.com
    Detection of m6A in single cultured cells using scDART-seq
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    sciencedirect.com/science/article/pii/S2666166722005263
  40. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
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    sciencedirect.com/science/article/pii/S2211124722010531
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcription Elongation Machinery Is a Druggable Dependency and Potentiates Immunotherapy in Glioblastoma Stem Cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC8831451/
  42. Jul 2022
  43. 52.53.155.43 52.53.155.43
    cir-21-0643-html.html
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    52.53.155.43/6d3233cac313fd81cc115a198e89306ed5395551/cir-21-0643-html.html
  44. www.cell.com www.cell.com
    EGFR signaling activates intestinal stem cells by promoting mitochondrial biogenesis and β-oxidation
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    cell.com/current-biology/fulltext/S0960-9822(22)01104-6
  45. www.researchsquare.com www.researchsquare.com
    Home
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    researchsquare.com/article/rs-6955925/'https://www.researchsquare.com/article/rs-6955925/v1
  46. Jun 2022
  47. 52.53.155.43 52.53.155.43
    mcr-21-1039-html.html
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    52.53.155.43/240568277fe12e2c0a6052e56a90b7b23828225f/mcr-21-1039 (1)-html.html
  48. www.nature.com www.nature.com
    TCF-1 promotes chromatin interactions across topologically associating domains in T cell progenitors
    1
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    nature.com/articles/s41590-022-01232-z
  49. elifesciences.org elifesciences.org
    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3
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    elifesciences.org/articles/66909
  50. www.sciencedirect.com www.sciencedirect.com
    EED is required for mouse primordial germ cell differentiation in the embryonic gonad
    1
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    sciencedirect.com/science/article/pii/S1534580722003690
  51. www.sciencedirect.com www.sciencedirect.com
    Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine
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    sciencedirect.com/science/article/pii/S109727652200483X
  52. www.sciencedirect.com www.sciencedirect.com
    JAZF1-SUZ12 dysregulates PRC2 function and gene expression during cell differentiation
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    sciencedirect.com/science/article/pii/S2211124722006647
  53. May 2022
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ribbon boosts ribosomal protein gene expression to coordinate organ form and function
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9237840/
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA-PK promotes DNA end resection at DNA double strand breaks in G0 cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9122494/
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
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    ncbi.nlm.nih.gov/pmc/articles/PMC9049114/
  57. Apr 2022
  58. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
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    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15838
  59. www.sciencedirect.com www.sciencedirect.com
    RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex
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    sciencedirect.com/science/article/pii/S2211124722004934
  60. www.sciencedirect.com www.sciencedirect.com
    Trans-omics analysis of insulin action reveals a cell growth sub-network which co-regulates anabolic processes
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    sciencedirect.com/science/article/pii/S2589004222005016
  61. www.sciencedirect.com www.sciencedirect.com
    An adult-stage transcriptional program for survival of serotonergic connectivity
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    sciencedirect.com/science/article/pii/S2211124722004727
  62. www.sciencedirect.com www.sciencedirect.com
    HNF4A modulates glucocorticoid action in the liver
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    sciencedirect.com/science/article/pii/S2211124722004557
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Latent TGFβ-binding proteins 1 and 3 protect the larval zebrafish outflow tract from aneurysmal dilatation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8990920/
  64. Mar 2022
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  66. www.sciencedirect.com www.sciencedirect.com
    Viperin triggers ribosome collision-dependent translation inhibition to restrict viral replication
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    sciencedirect.com/science/article/pii/S1097276522002052
  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A test of the pioneer factor hypothesis using ectopic liver gene activation
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    ncbi.nlm.nih.gov/pmc/articles/PMC8849321/
  68. www.sciencedirect.com www.sciencedirect.com
    Metabolic incorporation of electron-rich ribonucleosides enhances APEX-seq for profiling spatially restricted nascent transcriptome
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    sciencedirect.com/science/article/pii/S2451945622000861
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Maelstrom functions in the production of Siwi-piRISC capable of regulating transposons in Bombyx germ cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8881725/
  70. www.sciencedirect.com www.sciencedirect.com
    Identification of new ETV6 modulators through a high throughput functional screening
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    sciencedirect.com/science/article/pii/S2589004222001286
  71. Feb 2022
  72. www.sciencedirect.com www.sciencedirect.com
    EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells
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    sciencedirect.com/science/article/pii/S1097276522000582
  73. www.sciencedirect.com www.sciencedirect.com
    Gene architecture directs splicing outcome in separate nuclear spatial regions
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    sciencedirect.com/science/article/pii/S109727652200106X
  74. journals.plos.org journals.plos.org
    The endoplasmic reticulum proteostasis network profoundly shapes the protein sequence space accessible to HIV envelope
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    journals.plos.org/plosbiology/article
  75. www.sciencedirect.com www.sciencedirect.com
    Simultaneous cellular and molecular phenotyping of embryonic mutants using single-cell regulatory trajectories
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    sciencedirect.com/science/article/pii/S1534580722000557
  76. academic.oup.com academic.oup.com
    An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab096/6521876
  77. Jan 2022
  78. www.sciencedirect.com www.sciencedirect.com
    scDART-seq reveals distinct m6A signatures and mRNA methylation heterogeneity in single cells
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    sciencedirect.com/science/article/pii/S1097276521011436
  79. www.sciencedirect.com www.sciencedirect.com
    Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration
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    sciencedirect.com/science/article/pii/S153458072101039X
  80. www.sciencedirect.com www.sciencedirect.com
    Multimodal regulatory elements within a hormone-specific super enhancer control a heterogeneous transcriptional response
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    sciencedirect.com/science/article/pii/S1097276521011400
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC1 sustains the integrity of neural fate in the absence of PRC2 function
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8765755/
  82. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic loci mispositioning in Tmem120a knockout mice yields latent lipodystrophy
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    ncbi.nlm.nih.gov/pmc/articles/PMC8758788/
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
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    ncbi.nlm.nih.gov/pmc/articles/PMC8744892/
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8709578/
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MAP3K7 loss drives enhanced androgen signaling and independently confers risk of recurrence in prostate cancer with joint loss of CHD1
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8254790/
  86. Dec 2021
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8685854/
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PEGS: An efficient tool for gene set enrichment within defined sets of genomic intervals
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8406447/
  89. www.cell.com www.cell.com
    MYC assembles and stimulates topoisomerases 1 and 2 in a “topoisome”
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    cell.com/molecular-cell/fulltext/S1097-2765(21)00996-5
  90. www.sciencedirect.com www.sciencedirect.com
    Parity-induced changes to mammary epithelial cells control NKT cell expansion and mammary oncogenesis
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    sciencedirect.com/science/article/pii/S221112472101593X
  91. Nov 2021
  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia
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    ncbi.nlm.nih.gov/pmc/articles/PMC8553341/
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sequence features of retrotransposons allow for epigenetic variability
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    ncbi.nlm.nih.gov/pmc/articles/PMC8555987/
  94. www.sciencedirect.com www.sciencedirect.com
    Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription
    1
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    sciencedirect.com/science/article/pii/S2211124721014169
  95. Oct 2021
  96. www.cell.com www.cell.com
    Conserved heterodimeric GTPase Rbg1/Tma46 promotes efficient translation in eukaryotic cells
    1
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    cell.com/cell-reports/fulltext/S2211-1247(21)01347-4
  97. www.nature.com www.nature.com
    An atlas of gene regulatory elements in adult mouse cerebrum
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    nature.com/articles/s41586-021-03604-1
  98. www.sciencedirect.com www.sciencedirect.com
    DREAM represses distinct targets by cooperating with different THAP domain proteins
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    sciencedirect.com/science/article/pii/S2211124721012997
  99. www.sciencedirect.com www.sciencedirect.com
    Evolutionary history of the extinct Sardinian dhole
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    sciencedirect.com/science/article/pii/S0960982221013154
  100. www.nature.com www.nature.com
    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
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    nature.com/articles/s41586-021-03500-8
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Epigenomic and Transcriptomic Dynamics During Human Heart Organogenesis
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    ncbi.nlm.nih.gov/pmc/articles/PMC7554226/
  102. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Information content differentiates enhancers from silencers in mouse photoreceptors
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    ncbi.nlm.nih.gov/pmc/articles/PMC8492058/
  103. www.sciencedirect.com www.sciencedirect.com
    PIWI-mediated control of tissue-specific transposons is essential for somatic cell differentiation
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    sciencedirect.com/science/article/pii/S2211124721012304
  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
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    ncbi.nlm.nih.gov/pmc/articles/PMC8478411/
  105. Sep 2021
  106. link.springer.com link.springer.com
    Elevated transcription of transposable elements is accompanied by het-siRNA-driven de novo DNA methylation in grapevine embryogenic callus
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    link.springer.com/article/10.1186/s12864-021-07973-9
  107. www.sciencedirect.com www.sciencedirect.com
    SPT5 stabilizes RNA polymerase II, orchestrates transcription cycles, and maintains the enhancer landscape
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