471 Matching Annotations
  1. Oct 2024
  2. www.sciencedirect.com www.sciencedirect.com
    HOXDeRNA activates a cancerous transcription program and super enhancers via genome-wide binding
    1
    1. scibot 09 Oct 2024
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2024.09.018

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    sciencedirect.com/science/article/pii/S1097276524007755
  3. aacrjournals.org aacrjournals.org
    Systematic Analysis of Intronic miRNAs Reveals Cooperativity within the Multicomponent FTX Locus to Promote Colon Cancer Development
    1
    1. scibot 02 Oct 2024
      RRID:SCR_006646

      DOI: 10.1158/0008-5472.CAN-20-1406

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    aacrjournals.org/cancerres/article/81/5/1308/649526/Systematic-Analysis-of-Intronic-miRNAs-Reveals
  4. Sep 2024
  5. www.sciencedirect.com www.sciencedirect.com
    Genomic surveillance as a scalable framework for precision phage therapy against antibiotic-resistant pathogens
    1
    1. scibot 27 Sep 2024
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2024.09.009

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    sciencedirect.com/science/article/pii/S0092867424010274
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SJPedPanel: A pan-cancer gene panel for childhood malignancies to enhance cancer monitoring and early detection
    1
    1. scibot 25 Sep 2024
      RRID:SCR_006646

      DOI: 10.1158/1078-0432.CCR-24-1063

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    ncbi.nlm.nih.gov/pmc/articles/PMC11393547/
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Proteogenomics of Prostate Cancer Radioresistance
    1
    1. scibot 25 Sep 2024
      RRID:SCR_006646

      DOI: 10.1158/2767-9764.CRC-24-0292

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    ncbi.nlm.nih.gov/pmc/articles/PMC11411600/
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Epitranscriptomic m6A Regulation of Axon Regeneration in the Adult Mammalian Nervous System
    1
    1. scibot 25 Sep 2024
      RRID:SCR_006646

      DOI: 10.1016/j.neuron.2017.12.036

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    ncbi.nlm.nih.gov/pmc/articles/PMC5777326/
  9. www.sciencedirect.com www.sciencedirect.com
    Lysosome-related organelle integrity suppresses TIR-1 aggregation to restrain toxic propagation of p38 innate immunity
    1
    1. scibot 25 Sep 2024
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2024.114674

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    sciencedirect.com/science/article/pii/S2211124724010258
  10. www.nature.com www.nature.com
    Untitled document
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    1. scibot 25 Sep 2024
      RRID:SCR_006646

      DOI: 10.1038/s41586-018-0845-0

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    nature.com/articles/s41586-018-0845-0
  11. www.sciencedirect.com www.sciencedirect.com
    Multiple direct and indirect roles of the Paf1 complex in transcription elongation, splicing, and histone modifications
    1
    1. scibot 10 Sep 2024
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2024.114730

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    sciencedirect.com/science/article/pii/S2211124724010817
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Detecting Small Cell Transformation in Patients with Advanced EGFR Mutant Lung Adenocarcinoma through Epigenomic cfDNA Profiling
    1
    1. scibot 05 Sep 2024
      RRID:SCR_006646

      DOI: 10.1158/1078-0432.CCR-24-0466

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    ncbi.nlm.nih.gov/pmc/articles/PMC11369616/
  13. Aug 2024
  14. www.biorxiv.org www.biorxiv.org
    Low-pass nanopore sequencing for measurement of global methylation levels in plants
    1
    1. scibot 23 Aug 2024
      RRID:SCR_006646

      DOI: 10.1101/2024.08.12.607255

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    biorxiv.org/content/10.1101/2024.08.12.607255v1
  15. www.biorxiv.org www.biorxiv.org
    Experimental and Computational Methods for Allelic Imbalance Analysis from Single-Nucleus RNA-seq Data
    1
    1. scibot 23 Aug 2024
      RRID:SCR_006646

      DOI: 10.1101/2024.08.13.607784

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    biorxiv.org/content/10.1101/2024.08.13.607784v1
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    CRISPR screening uncovers a long-range enhancer for ONECUT1 in pancreatic differentiation and links a diabetes risk variant
    1
    1. scibot 23 Aug 2024
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2024.114640

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    ncbi.nlm.nih.gov/pmc/articles/PMC11406439/
  17. www.sciencedirect.com www.sciencedirect.com
    Members of an array of zinc-finger proteins specify distinct Hox chromatin boundaries
    1
    1. scibot 23 Aug 2024
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2024.08.007

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    sciencedirect.com/science/article/pii/S1097276524006610
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    HLTF resolves G4s and promotes G4-induced replication fork slowing to maintain genome stability
    1
    1. scibot 21 Aug 2024
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2024.07.018

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    ncbi.nlm.nih.gov/pmc/articles/PMC11366124/
  19. Jul 2024
  20. www.biorxiv.org www.biorxiv.org
    Advancing the Indian Cattle Pangenome: Characterizing Non-Reference Sequences in Bos indicus
    1
    1. scibot 26 Jul 2024
      RRID:SCR_006646

      DOI: 10.1101/2024.07.18.604025

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    biorxiv.org/content/10.1101/2024.07.18.604025v1
  21. www.sciencedirect.com www.sciencedirect.com
    MYB-related transcription factors control chloroplast biogenesis
    1
    1. scibot 24 Jul 2024
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2024.06.039

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    sciencedirect.com/science/article/pii/S009286742400713X
  22. www.sciencedirect.com www.sciencedirect.com
    The primitive endoderm supports lineage plasticity to enable regulative development
    1
    1. scibot 24 Jul 2024
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2024.05.051

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    sciencedirect.com/science/article/pii/S0092867424005956
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ER procollagen storage defect without coupled unfolded protein response drives precocious arthritis
    1
    1. scibot 14 Jul 2024
      RRID:SCR_006646

      DOI: 10.26508/lsa.202402842

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    ncbi.nlm.nih.gov/pmc/articles/PMC11234256/
  24. www.mdpi.com www.mdpi.com
    Immunological Signatures for Early Detection of Human Head and Neck Squamous Cell Carcinoma through RNA Transcriptome Analysis of Blood Platelets
    2
    1. scibot 03 Jul 2024
      RRID:SCR_006646

      DOI: 10.3390/cancers16132399

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    2. scibot 03 Jul 2024
      RRID:SCR_006646

      DOI: 10.3390/cancers16132399

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    mdpi.com/2072-6694/16/13/2399
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Placental co-transcriptional activator Vestigial-like 1 (VGLL1) drives tumorigenesis via increasing transcription of proliferation and invasion genes
    1
    1. scibot 03 Jul 2024
      RRID:SCR_006646

      DOI: 10.3389/fonc.2024.1403052

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    ncbi.nlm.nih.gov/pmc/articles/PMC11190739/
  26. Jun 2024
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis
    1
    1. scibot 22 Jun 2024
      RRID:SCR_006646

      DOI: 10.1093/gigascience/giae032

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170221/
  28. molecular-cancer.biomedcentral.com molecular-cancer.biomedcentral.com
    Diversifying the anthracycline class of anti-cancer drugs identifies aclarubicin for superior survival of acute myeloid leukemia patients
    1
    1. scibot 06 Jun 2024
      RRID:SCR_006646

      DOI: 10.1186/s12943-024-02034-7

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    molecular-cancer.biomedcentral.com/articles/10.1186/s12943-024-02034-7
  29. May 2024
  30. www.sciencedirect.com www.sciencedirect.com
    CDK7 kinase activity promotes RNA polymerase II promoter escape by facilitating initiation factor release
    1
    1. scibot 31 May 2024
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2024.05.007

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    sciencedirect.com/science/article/pii/S1097276524004003
  31. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
    1. scibot 30 May 2024
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2024.04.047

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    2. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    3. scibot 30 May 2024
      RRID:SCR_006646

      DOI: 10.1016/j.cell.2024.04.047

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    sciencedirect.com/science/article/pii/S0092867424004732
  32. www.sciencedirect.com www.sciencedirect.com
    Heterochromatic 3D genome organization is directed by HP1a- and H3K9-dependent and independent mechanisms
    1
    1. scibot 30 May 2024
      RRID:SCR_006646

      DOI: 10.1016/j.molcel.2024.05.002

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    sciencedirect.com/science/article/pii/S1097276524003952
  33. 52.53.155.43 52.53.155.43
    ZNF143 is a transcriptional regulator of nuclear-encoded mitochondrial genes that acts independently of looping and CTCF
    2
    1. scibot 29 May 2024
      RRID:SCR_006646

      DOI: 10.1101/2024.03.08.583864

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    2. scibot 29 May 2024
      RRID:SCR_006646

      DOI: 10.1101/2024.03.08.583864

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    52.53.155.43/18a5f967080cacc79c7f5cca9d1b0be744600675/2024.03.08.583864v1.full-html.html
  34. 52.53.155.43 52.53.155.43
    mcr-23-0295-html.html
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    1. scibot 23 May 2024
      RRID:SCR_006646

      DOI: 10.1158/1541-7786.mcr-23-0295

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    52.53.155.43/d0655220046c67483bcefd25ef239fc58ad80cdd/mcr-23-0295-html.html
  35. www.sciencedirect.com www.sciencedirect.com
    T-bet deficiency and Hic1 induction override TGF-β-dependency in the formation of CD103+ intestine-resident memory CD8+ T cells
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    1. scibot 23 May 2024
      RRID:SCR_006646

      DOI: 10.1016/j.celrep.2024.114258

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    sciencedirect.com/science/article/pii/S2211124724005862
  36. www.biorxiv.org www.biorxiv.org
    Unraveling Genome- and Immunome-wide Genetic Diversity in Jaguars (Panthera onca): Implications for Targeted Conservation
    1
    1. scibot 17 May 2024
      RRID:SCR_00664674

      DOI: 10.1101/2024.05.06.592690

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    biorxiv.org/content/10.1101/2024.05.06.592690v1
  37. www.sciencedirect.com www.sciencedirect.com
    Transcription factor dynamics, oscillation, and functions in human enteroendocrine cell differentiation
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      DOI: 10.1016/j.stem.2024.04.015

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    sciencedirect.com/science/article/pii/S1934590924001425
  38. 52.53.155.43 52.53.155.43
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
    1
    1. scibot 10 May 2024
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      DOI: 10.1101/2024.02.19.579948

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    52.53.155.43/cd1f9c7be80d56e211920ba04afd056c82fa391f/2024.02.19.579948.full-html.html
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Positive and negative feedback regulation of the TGF-β1 explains two equilibrium states in skin aging
    1
    1. scibot 08 May 2024
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      DOI: 10.1016/j.isci.2024.109708

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    ncbi.nlm.nih.gov/pmc/articles/PMC11066433/
  40. elifesciences.org elifesciences.org
    Ribosome subunit attrition and activation of the p53–MDM4 axis dominate the response of MLL-rearranged cancer cells to WDR5 WIN site inhibition
    1
    1. scibot 03 May 2024
      RRID:SCR_006646

      DOI: 10.7554/eLife.90683

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    elifesciences.org/articles/90683
  41. www.sciencedirect.com www.sciencedirect.com
    MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons
    1
    1. scibot 02 May 2024
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      DOI: 10.1016/j.neuron.2024.04.007

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    sciencedirect.com/science/article/pii/S0896627324002459
  42. Apr 2024
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAT3 couples activated tyrosine kinase signaling to the oncogenic core transcriptional regulatory circuitry of anaplastic large cell lymphoma
    1
    1. scibot 03 Apr 2024
      SCR_006646

      DOI: 10.1016/j.xcrm.2024.101472

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    ncbi.nlm.nih.gov/pmc/articles/PMC10983107/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Select EZH2 inhibitors enhance viral mimicry effects of DNMT inhibition through a mechanism involving NFAT:AP-1 signaling
    1
    1. scibot 03 Apr 2024
      RRID:SCR_006646

      DOI: 10.1126/sciadv.adk4423

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    ncbi.nlm.nih.gov/pmc/articles/PMC10971413/
  45. Mar 2024
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deciphering the spatiotemporal transcriptional and chromatin accessibility of human retinal organoid development at the single-cell level
    1
    1. scibot 22 Mar 2024
      RRID:SCR_006646

      DOI: 10.1016/j.isci.2024.109397

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    Chondrodysplasia-inducing COL2A1 p.Gly1170Ser causes an ER storage defect without associated unfolded protein response in a human cartilage model
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    TET2 lesions enhance the aggressiveness of CEBPA-mutant acute myeloid leukemia by rebalancing GATA2 expression
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  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Acquisition of Neural Fate by Combination of BMP Blockade and Chromatin Modification
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  93. Sep 2023
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  95. www.sciencedirect.com www.sciencedirect.com
    A bipartite function of ESRRB can integrate signaling over time to balance self-renewal and differentiation
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  96. Aug 2023
  97. www.sciencedirect.com www.sciencedirect.com
    The SMC5/6 complex compacts and silences unintegrated HIV-1 DNA and is antagonized by Vpr
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  98. 52.53.155.43 52.53.155.43
    Aberrant accumulation of Kras-dependent pervasive transcripts during tumor progression renders cancer cells dependent on PAF1 expression
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  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deficiency of the Polycomb protein RYBP and TET methylcytosine oxidases promotes extensive CpG island hypermethylation and malignant transformation
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  100. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inhibition of DNMT1 methyltransferase activity via glucose-regulated O-GlcNAcylation alters the epigenome
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  101. Jul 2023
  102. www.sciencedirect.com www.sciencedirect.com
    The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina
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    CRIC-seq protocol for in situ profiling of proximal RNA-RNA contacts associated with RNA-binding proteins
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  104. 52.53.155.43 52.53.155.43
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  105. www.sciencedirect.com www.sciencedirect.com
    Metabolic regulation of CTCF expression and chromatin association dictates starvation response in mice and flies
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  106. Jun 2023
  107. 52.53.155.43 52.53.155.43
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  108. www.biorxiv.org www.biorxiv.org
    Divergence of TORC1-mediated Stress Response Leads to Novel Acquired Stress Resistance in a Pathogenic Yeast
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  109. www.embopress.org www.embopress.org
    DOT1L bridges transcription and heterochromatin formation at mammalian pericentromeres
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  110. aacrjournals.org aacrjournals.org
    FOXA1 reprogramming dictates retinoid X receptor response in ESR1 mutant breast cancer
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    aacrjournals.org/mcr/article/21/6/591/726508/FOXA1-Reprogramming-Dictates-Retinoid-X-Receptor
  111. May 2023
  112. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evolution of Resistance to Irinotecan in Cancer Cells Involves Generation of Topoisomerase-Guided Mutations in Non-Coding Genome That Reduce the Chances of DNA Breaks
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      DOI: 10.3390/ijms24108717

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  113. www.biorxiv.org www.biorxiv.org
    Transition from Transient DNA Rereplication to Inherited Gene Amplification Following Prolonged Environmental Stress
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  114. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Generating minimum set of gRNA to cover multiple targets in multiple genomes with MINORg
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      DOI: 10.1093/nar/gkad142

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  115. www.biorxiv.org www.biorxiv.org
    L1 retrotransposons drive human neuronal transcriptome complexity and functional diversification
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  116. www.sciencedirect.com www.sciencedirect.com
    Functional interplay between Mediator and RSC chromatin remodeling complex controls nucleosome-depleted region maintenance at promoters
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  117. Apr 2023
  118. www.sciencedirect.com www.sciencedirect.com
    A hyper-quiescent chromatin state formed during aging is reversed by regeneration
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  119. www.sciencedirect.com www.sciencedirect.com
    Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population
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  120. www.sciencedirect.com www.sciencedirect.com
    Comprehensive epigenomic profiling reveals the extent of disease-specific chromatin states and informs target discovery in ankylosing spondylitis
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  121. www.sciencedirect.com www.sciencedirect.com
    Novel enhancers conferring compensatory transcriptional regulation of Nkx2-5 in heart development
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  122. www.sciencedirect.com www.sciencedirect.com
    Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia
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  123. 52.53.155.43 52.53.155.43
    Active maintenance of CD8+ T cell naïvety through regulation of global genome architecture
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  124. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SWI/SNF Blockade Disrupts PU.1-Directed Enhancer Programs in Normal Hematopoietic Cells and Acute Myeloid Leukemia
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  125. Mar 2023
  126. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
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      DOI: 10.46471/gigabyte.44

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  127. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ViReMa: a virus recombination mapper of next-generation sequencing data characterizes diverse recombinant viral nucleic acids
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  128. www.sciencedirect.com www.sciencedirect.com
    A central chaperone-like role for 14-3-3 proteins in human cells
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  129. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MeCP2 regulates Gdf11, a dosage-sensitive gene critical for neurological function
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      DOI: 10.7554/eLife.83806

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  130. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome of a giant (trevally): Caranx ignobilis
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    ncbi.nlm.nih.gov/pmc/articles/PMC9694125/
  131. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale assembly of the highly heterozygous genome of red clover (Trifolium pratense L.), an allogamous forage crop species
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  132. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first complete mitochondrial genome of Diadema antillarum (Diadematoida, Diadematidae)
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  133. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    svaRetro and svaNUMT: modular packages for annotating retrotransposed transcripts and nuclear integration of mitochondrial DNA in genome sequencing data
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  134. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
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  135. Feb 2023
  136. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
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      DOI: 10.1093/gigascience/giad005

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  137. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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      DOI: 10.1016/j.ygeno.2023.110582

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  138. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide epigenetic and mRNA-expression profiling followed by CRISPR/Cas9-mediated gene-disruptions corroborate the MIR141/MIR200C-ZEB1/ZEB2-FGFR1 axis in acquired EMT-associated EGFR TKI-resistance in NSCLC cells
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      DOI: 10.21037/tlcr-22-507

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  139. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of PBRM1 alters promoter histone modifications and activates ALDH1A1 to drive renal cell carcinoma
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  140. Jan 2023
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    Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype
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  142. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
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  143. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC2 Inactivating Mutations in Cancer Enhance Cytotoxic Response to DNMT1 Targeted Therapy via Enhanced Viral Mimicry
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  144. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative Genomics Provides Etiologic and Biological Insight into Melanoma Subtypes
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  145. Dec 2022
  146. aacrjournals.org aacrjournals.org
    BAF complex maintains glioma stem cells in pediatric H3K27M-glioma
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  147. Nov 2022
  148. www.sciencedirect.com www.sciencedirect.com
    Tip60-mediated H2A.Z acetylation promotes neuronal fate specification and bivalent gene activation
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    Reconstructing mutational lineages in breast cancer by multi-patient-targeted single-cell DNA sequencing
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  150. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
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  151. Oct 2022
  152. www.sciencedirect.com www.sciencedirect.com
    A cis-regulatory lexicon of DNA motif combinations mediating cell-type-specific gene regulation
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  153. Sep 2022
  154. www.sciencedirect.com www.sciencedirect.com
    FOXA1 regulates alternative splicing in prostate cancer
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    A small proportion of X-linked genes contribute to X chromosome upregulation in early embryos via BRD4-mediated transcriptional activation
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    The human mitochondrial genome contains a second light strand promoter
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  157. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Intracellular cholesterol pools regulate oncogenic signaling and epigenetic circuitries in Early T-cell Precursor Acute Lymphoblastic Leukemia
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  158. Aug 2022
  159. 52.53.155.43 52.53.155.43
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  160. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Adrenergic receptor signaling induced by Klf15, a regulator of regeneration enhancer, promotes kidney reconstruction
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  161. www.sciencedirect.com www.sciencedirect.com
    Detection of m6A in single cultured cells using scDART-seq
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  162. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
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  163. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcription Elongation Machinery Is a Druggable Dependency and Potentiates Immunotherapy in Glioblastoma Stem Cells
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  164. Jul 2022
  165. 52.53.155.43 52.53.155.43
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  166. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    EGFR signaling activates intestinal stem cells by promoting mitochondrial biogenesis and β-oxidation
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  167. www.researchsquare.com www.researchsquare.com
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  168. Jun 2022
  169. 52.53.155.43 52.53.155.43
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  170. www.nature.com www.nature.com
    TCF-1 promotes chromatin interactions across topologically associating domains in T cell progenitors
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  171. elifesciences.org elifesciences.org
    Dnmt3a knockout in excitatory neurons impairs postnatal synapse maturation and increases the repressive histone modification H3K27me3
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  172. www.sciencedirect.com www.sciencedirect.com
    EED is required for mouse primordial germ cell differentiation in the embryonic gonad
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    Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine
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    JAZF1-SUZ12 dysregulates PRC2 function and gene expression during cell differentiation
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  175. May 2022
  176. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ribbon boosts ribosomal protein gene expression to coordinate organ form and function
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  177. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA-PK promotes DNA end resection at DNA double strand breaks in G0 cells
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  178. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
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  179. Apr 2022
  180. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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  181. www.sciencedirect.com www.sciencedirect.com
    RPAP2 regulates a transcription initiation checkpoint by inhibiting assembly of pre-initiation complex
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    Trans-omics analysis of insulin action reveals a cell growth sub-network which co-regulates anabolic processes
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    An adult-stage transcriptional program for survival of serotonergic connectivity
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    HNF4A modulates glucocorticoid action in the liver
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  185. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Latent TGFβ-binding proteins 1 and 3 protect the larval zebrafish outflow tract from aneurysmal dilatation
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  186. Mar 2022
  187. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
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  188. www.sciencedirect.com www.sciencedirect.com
    Viperin triggers ribosome collision-dependent translation inhibition to restrict viral replication
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  189. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A test of the pioneer factor hypothesis using ectopic liver gene activation
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  190. www.sciencedirect.com www.sciencedirect.com
    Metabolic incorporation of electron-rich ribonucleosides enhances APEX-seq for profiling spatially restricted nascent transcriptome
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  191. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Maelstrom functions in the production of Siwi-piRISC capable of regulating transposons in Bombyx germ cells
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  192. www.sciencedirect.com www.sciencedirect.com
    Identification of new ETV6 modulators through a high throughput functional screening
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    sciencedirect.com/science/article/pii/S2589004222001286
  193. Feb 2022
  194. www.sciencedirect.com www.sciencedirect.com
    EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells
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  195. www.sciencedirect.com www.sciencedirect.com
    Gene architecture directs splicing outcome in separate nuclear spatial regions
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  196. journals.plos.org journals.plos.org
    The endoplasmic reticulum proteostasis network profoundly shapes the protein sequence space accessible to HIV envelope
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      DOI: 10.1371/journal.pbio.3001569

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  197. www.sciencedirect.com www.sciencedirect.com
    Simultaneous cellular and molecular phenotyping of embryonic mutants using single-cell regulatory trajectories
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  198. academic.oup.com academic.oup.com
    An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
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      DOI: 10.1093/gigascience/giab096

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab096/6521876
  199. Jan 2022
  200. www.sciencedirect.com www.sciencedirect.com
    scDART-seq reveals distinct m6A signatures and mRNA methylation heterogeneity in single cells
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    sciencedirect.com/science/article/pii/S1097276521011436
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    Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration
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  202. www.sciencedirect.com www.sciencedirect.com
    Multimodal regulatory elements within a hormone-specific super enhancer control a heterogeneous transcriptional response
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  203. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRC1 sustains the integrity of neural fate in the absence of PRC2 function
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  204. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic loci mispositioning in Tmem120a knockout mice yields latent lipodystrophy
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  205. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
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  206. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Heat shock factor 1 (HSF1) cooperates with estrogen receptor α (ERα) in the regulation of estrogen action in breast cancer cells
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  207. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MAP3K7 loss drives enhanced androgen signaling and independently confers risk of recurrence in prostate cancer with joint loss of CHD1
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      DOI: 10.1158/1541-7786.MCR-20-0913

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  208. Dec 2021
  209. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)
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  210. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PEGS: An efficient tool for gene set enrichment within defined sets of genomic intervals
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  211. www.cell.com www.cell.com
    MYC assembles and stimulates topoisomerases 1 and 2 in a “topoisome”
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    cell.com/molecular-cell/fulltext/S1097-2765(21)00996-5
  212. www.sciencedirect.com www.sciencedirect.com
    Parity-induced changes to mammary epithelial cells control NKT cell expansion and mammary oncogenesis
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  213. Nov 2021
  214. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia
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      DOI: 10.7554/eLife.70753

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  215. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sequence features of retrotransposons allow for epigenetic variability
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  216. www.sciencedirect.com www.sciencedirect.com
    Acute depletion of the ARID1A subunit of SWI/SNF complexes reveals distinct pathways for activation and repression of transcription
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    sciencedirect.com/science/article/pii/S2211124721014169
  217. Oct 2021
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    Conserved heterodimeric GTPase Rbg1/Tma46 promotes efficient translation in eukaryotic cells
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    sciencedirect.com/science/article/pii/S2211124721013474
  219. www.nature.com www.nature.com
    An atlas of gene regulatory elements in adult mouse cerebrum
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      DOI: 10.1038/s41586-021-03604-1

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  220. www.sciencedirect.com www.sciencedirect.com
    DREAM represses distinct targets by cooperating with different THAP domain proteins
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    sciencedirect.com/science/article/pii/S2211124721012997
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    Evolutionary history of the extinct Sardinian dhole
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    sciencedirect.com/science/article/pii/S0960982221013154
  222. www.nature.com www.nature.com
    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
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  223. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Epigenomic and Transcriptomic Dynamics During Human Heart Organogenesis
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      DOI: 10.1161/CIRCRESAHA.120.316704

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  224. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Information content differentiates enhancers from silencers in mouse photoreceptors
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  225. www.sciencedirect.com www.sciencedirect.com
    PIWI-mediated control of tissue-specific transposons is essential for somatic cell differentiation
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  226. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
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      DOI: 10.7554/eLife.68479

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  227. Sep 2021
  228. link.springer.com link.springer.com
    Elevated transcription of transposable elements is accompanied by het-siRNA-driven de novo DNA methylation in grapevine embryogenic callus
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      DOI: 10.1186/s12864-021-07973-9

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    SPT5 stabilizes RNA polymerase II, orchestrates transcription cycles, and maintains the enhancer landscape
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