336 Matching Annotations
  1. Aug 2021
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6344342/
  3. epigeneticsandchromatin.biomedcentral.com epigeneticsandchromatin.biomedcentral.com
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    epigeneticsandchromatin.biomedcentral.com/articles/10.1186/s13072-019-0254-0
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gigwa v2—Extended and improved genotype investigator
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    ncbi.nlm.nih.gov/pmc/articles/PMC6511067/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6290886/
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    ncbi.nlm.nih.gov/pmc/articles/PMC5575751/
  7. www.sciencedirect.com www.sciencedirect.com
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    sciencedirect.com/science/article/pii/S009286741831506X
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    sciencedirect.com/science/article/pii/S1074761318304771
  9. Jul 2021
  10. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Glial pathology in a novel spontaneous mutant mouse of the Eif2b5 gene: a vanishing white matter disease model
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    onlinelibrary.wiley.com/doi/10.1111/jnc.14887
  11. elifesciences.org elifesciences.org
    FAK activity sustains intrinsic and acquired ovarian cancer resistance to platinum chemotherapy
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    elifesciences.org/articles/47327
  12. academic.oup.com academic.oup.com
    HUMAN TROPHOBLAST DIFFERENTIATION IS ASSOCIATED WITH PROFOUND GENE REGULATORY AND EPIGENETIC CHANGES
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    academic.oup.com/endo/article-abstract/160/9/2189/5530214
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    HOXA9 promotes MYC-mediated leukemogenesis by maintaining gene expression for multiple anti-apoptotic pathways
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    elifesciences.org/articles/64148
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    Exon Junction Complexes Suppress Spurious Splice Sites to Safeguard Transcriptome Integrity
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    sciencedirect.com/science/article/pii/S1097276518306907
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    Native Chromatin Proteomics Reveals a Role for Specific Nucleoporins in Heterochromatin Organization and Maintenance
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    sciencedirect.com/science/article/pii/S1097276519307968
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    Tyr1 phosphorylation promotes phosphorylation of Ser2 on the C-terminal domain of eukaryotic RNA polymerase II by P-TEFb
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    elifesciences.org/articles/48725
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    A genome‐wide screen identifies IRF2 as a key regulator of caspase‐4 in human cells
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    embopress.org/doi/full/10.15252/embr.201948235
  18. academic.oup.com academic.oup.com
    Chromosome-scale assemblies reveal the structural evolution of African cichlid genomes
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    academic.oup.com/gigascience/article/8/4/giz030/5426571
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    Global epigenetic analysis of BDNF Val66Met mice hippocampus reveals changes in dendrite and spine remodeling genes
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    onlinelibrary.wiley.com/doi/full/10.1002/hipo.22991
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    BET Inhibition Induces HEXIM1- and RAD51-Dependent Conflicts between Transcription and Replication
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    sciencedirect.com/science/article/pii/S2211124718316838
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    JARID2 Functions as a Tumor Suppressor in Myeloid Neoplasms by Repressing Self-Renewal in Hematopoietic Progenitor Cells
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    sciencedirect.com/science/article/pii/S1535610818304744
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    N6-methyladenine DNA Modification in Glioblastoma
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    sciencedirect.com/science/article/pii/S009286741831314X
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    SUMO Safeguards Somatic and Pluripotent Cell Identities by Enforcing Distinct Chromatin States
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    sciencedirect.com/science/article/pii/S193459091830482X
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    ORY-1001, a Potent and Selective Covalent KDM1A Inhibitor, for the Treatment of Acute Leukemia
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    sciencedirect.com/science/article/pii/S1535610818300230
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    BRD4 Inhibition Is Synthetic Lethal with PARP Inhibitors through the Induction of Homologous Recombination Deficiency
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    sciencedirect.com/science/article/pii/S1535610818300199
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    NANOS2 is a sequence-specific mRNA-binding protein that promotes transcript degradation in spermatogonial stem cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC8271163/
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    Deletion of RBMX RGG/RG motif in Shashi-XLID syndrome leads to aberrant p53 activation and neuronal differentiation defects
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    sciencedirect.com/science/article/pii/S2211124721007130
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Next-Generation Sequencing of Cell-Free DNA Extracted From Pleural Effusion Supernatant: Applications and Challenges
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    ncbi.nlm.nih.gov/pmc/articles/PMC8236629/
  29. May 2021
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ZC3H4 restricts non-coding transcription in human cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC8137146/
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    Non-canonical Targets of HIF1a Impair Oligodendrocyte Progenitor Cell Function
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    Derivation of Intermediate Pluripotent Stem Cells Amenable to Primordial Germ Cell Specification
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    sciencedirect.com/science/article/pii/S1934590920305415
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    A Prion-like Domain in Transcription Factor EBF1 Promotes Phase Separation and Enables B Cell Programming of Progenitor Chromatin
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    sciencedirect.com/science/article/pii/S1074761320304507
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    A single-cell analysis of the Arabidopsis vegetative shoot apex
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    sciencedirect.com/science/article/pii/S1534580721001611
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    Chromatin Accessibility Dynamics and a Hierarchical Transcriptional Regulatory Network Structure for Plant Somatic Embryogenesis
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    sciencedirect.com/science/article/pii/S1534580720305517
  36. Apr 2021
  37. www.sciencedirect.com www.sciencedirect.com
    Analysis of Brugada syndrome loci reveals that fine-mapping clustered GWAS hits enhances the annotation of disease-relevant variants
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    sciencedirect.com/science/article/pii/S2666379121000665
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    Cellular mRNA triggers structural transformation of Ebola virus matrix protein VP40 to its essential regulatory form
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    sciencedirect.com/science/article/pii/S2211124721003004
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    The SMC5/6 complex compacts and silences unintegrated HIV-1 DNA and is antagonized by Vpr
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    sciencedirect.com/science/article/pii/S1931312821001013
  40. Mar 2021
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inducible mechanisms of disease tolerance provide an alternative strategy of acquired immunity to malaria
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    ncbi.nlm.nih.gov/pmc/articles/PMC7987336/
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ectopic humanized mesenchymal niche in mice enables robust engraftment of myelodysplastic stem cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC7610449/
  43. academic.oup.com academic.oup.com
    Germline EGFR variants are over-represented in adolescents and young adults (AYA) with adrenocortical carcinoma
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    academic.oup.com/hmg/article/29/22/3679/6035190
  44. Feb 2021
  45. currentprotocols.onlinelibrary.wiley.com currentprotocols.onlinelibrary.wiley.com
    Combined Gene Expression and Chromatin Immunoprecipitation From a Single Mouse Hippocampus
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    currentprotocols.onlinelibrary.wiley.com/doi/10.1002/cpz1.33
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The origins and consequences of UPF1 variants in pancreatic adenosquamous carcinoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC7846273/
  47. Jan 2021
  48. www.sciencedirect.com www.sciencedirect.com
    Protocol for assaying chromatin accessibility using ATAC-seq in plants
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    sciencedirect.com/science/article/pii/S2666166720302768
  49. www.sciencedirect.com www.sciencedirect.com
    QUAKING Regulates Microexon Alternative Splicing of the Rho GTPase Pathway and Controls Microglia Homeostasis
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    sciencedirect.com/science/article/pii/S2211124720315497
  50. Dec 2020
  51. www.nature.com www.nature.com
    SVA retrotransposon insertion in exon of MMR genes results in aberrant RNA splicing and causes Lynch syndrome
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    nature.com/articles/s41431-020-00779-5
  52. Oct 2020
  53. www.sciencedirect.com www.sciencedirect.com
    Widespread Transcriptional Readthrough Caused by Nab2 Depletion Leads to Chimeric Transcripts with Retained Introns
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    sciencedirect.com/science/article/pii/S2211124720313139
  54. academic.oup.com academic.oup.com
    DNA Methylation Profiling and Genomic Analysis in 20 Children with Short Stature Who Were Born Small for Gestational Age
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    academic.oup.com/jcem/article/105/12/dgaa465/5873625
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sperm-specific COX6B2 enhances oxidative phosphorylation, proliferation, and survival in human lung adenocarcinoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC7556868/
  56. Sep 2020
  57. www.sciencedirect.com www.sciencedirect.com
    Structure-Mediated RNA Decay by UPF1 and G3BP1
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    sciencedirect.com/science/article/pii/S1097276520300423
  58. elifesciences.org elifesciences.org
    Transposase-assisted tagmentation of RNA/DNA hybrid duplexes
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    elifesciences.org/articles/54919
  59. elifesciences.org elifesciences.org
    Aneuploidy as a cause of impaired chromatin silencing and mating-type specification in budding yeast
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    elifesciences.org/articles/27991
  60. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
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    pubmed.ncbi.nlm.nih.gov/32947622/
  61. link.springer.com link.springer.com
    Identification of novel fusion transcripts in meningioma
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    link.springer.com/article/10.1007/s11060-020-03599-1
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    OsNSUN2-Mediated 5-Methylcytosine mRNA Modification Enhances Rice Adaptation to High Temperature
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    sciencedirect.com/science/article/pii/S1534580720301933
  63. elifesciences.org elifesciences.org
    The histone modification reader ZCWPW1 links histone methylation to PRDM9-induced double-strand break repair
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    elifesciences.org/articles/53459
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Building the vertebrate codex using the gene breaking protein trap library
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    ncbi.nlm.nih.gov/pmc/articles/PMC7486118/
  65. elifesciences.org elifesciences.org
    Deletion of Stk11 and Fos in mouse BLA projection neurons alters intrinsic excitability and impairs formation of long-term aversive memory
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    elifesciences.org/articles/61036
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The testis protein ZNF165 is a SMAD3 cofactor that coordinates oncogenic TGFβ signaling in triple-negative breast cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC7302877/
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    LINE-1 specific nuclear organization in mice olfactory sensory neurons
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    sciencedirect.com/science/article/pii/S104474312030004X
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    Genome-Scale CRISPR Screening in Human Intestinal Organoids Identifies Drivers of TGF-β Resistance
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    sciencedirect.com/science/article/pii/S1934590920300606
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    Resolving the 3D Landscape of Transcription-Linked Mammalian Chromatin Folding
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    sciencedirect.com/science/article/pii/S1097276520301507
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    Nascent Transcript Folding Plays a Major Role in Determining RNA Polymerase Elongation Rates
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    sciencedirect.com/science/article/pii/S1097276520303877
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Expandable and reversible copy number amplification drives rapid adaptation to antifungal drugs
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    ncbi.nlm.nih.gov/pmc/articles/PMC7371428/
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sphingosine 1-phosphate-regulated transcriptomes in heterogenous arterial and lymphatic endothelium of the aorta
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    ncbi.nlm.nih.gov/pmc/articles/PMC7054001/
  73. www.sciencedirect.com www.sciencedirect.com
    Regulatory Dynamics of Tet1 and Oct4 Resolve Stages of Global DNA Demethylation and Transcriptomic Changes in Reprogramming
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    sciencedirect.com/science/article/pii/S2211124720300905
  74. Jan 2020
  75. elifesciences.org elifesciences.org
    Evolution of Yin and Yang isoforms of a chromatin remodeling subunit precedes the creation of two genes
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    elifesciences.org/articles/48119
  76. elifesciences.org elifesciences.org
    Large, three-generation human families reveal post-zygotic mosaicism and variability in germline mutation accumulation
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    elifesciences.org/articles/46922
  77. www.sciencedirect.com www.sciencedirect.com
    RNA Interactions Are Essential for CTCF-Mediated Genome Organization
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    sciencedirect.com/science/article/pii/S1097276519306549
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    GCNA Interacts with Spartan and Topoisomerase II to Regulate Genome Stability
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    sciencedirect.com/science/article/pii/S1534580719309372
  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome plasticity in Candida albicans is driven by long repeat sequences
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    ncbi.nlm.nih.gov/pmc/articles/PMC6591007/
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    P Granules Protect RNA Interference Genes from Silencing by piRNAs
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    Recurrent SMARCB1 Mutations Reveal a Nucleosome Acidic Patch Interaction Site That Potentiates mSWI/SNF Complex Chromatin Remodeling
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    A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity
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    Genome-wide Analyses of Chromatin State in Human Mast Cells Reveal Molecular Drivers and Mediators of Allergic and Inflammatory Diseases
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    ERG Controls B Cell Development by Promoting Igh V-to-DJ Recombination
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    sciencedirect.com/science/article/pii/S2211124719314317
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    Endodermal Maternal Transcription Factors Establish Super-Enhancers during Zygotic Genome Activation
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    sciencedirect.com/science/article/pii/S2211124719306242
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    Meta-analysis of Chromatin Programming by Steroid Receptors
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    sciencedirect.com/science/article/pii/S2211124719310794
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    DUX4 Suppresses MHC Class I to Promote Cancer Immune Evasion and Resistance to Checkpoint Blockade
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    sciencedirect.com/science/article/pii/S1534580719305295
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    Continuous and Discrete Neuron Types of the Adult Murine Striatum
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    sciencedirect.com/science/article/pii/S0896627319309675
  89. www.cell.com www.cell.com
    Distinct Classes of Chromatin Loops Revealed by Deletion of an RNA-Binding Region in CTCF
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    cell.com/molecular-cell/fulltext/S1097-2765(19)30594-5
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    Maternal Ribosomes Are Sufficient for Tissue Diversification during Embryonic Development in C. elegans
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    sciencedirect.com/science/article/pii/S1534580719300474
  91. academic.oup.com academic.oup.com
    Dynamic transcriptome profiling dataset of vaccinia virus obtained from long-read sequencing techniques
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    academic.oup.com/gigascience/article/7/12/giy139/5202462
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    Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina
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    ncbi.nlm.nih.gov/pmc/articles/PMC6322861/
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    Impaired LXRα Phosphorylation Attenuates Progression of Fatty Liver Disease
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  99. Nov 2018
  100. www.sciencedirect.com www.sciencedirect.com
    Histone Deacetylases 1 and 2 Regulate Microglia Function during Development, Homeostasis, and Neurodegeneration in a Context-Dependent Manner
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    IRF8 Regulates Transcription of Naips for NLRC4 Inflammasome Activation
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    Mutational Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in Brain Tumor
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    sciencedirect.com/science/article/pii/S0092867418312509
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    The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory
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