584 Matching Annotations
  1. Sep 2020
  2. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the jellyfish Rhopilema esculentum
    1
    1. scibot 23 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa036

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    academic.oup.com/gigascience/article/9/4/giaa036/5823175
  3. elifesciences.org elifesciences.org
    Aneuploidy as a cause of impaired chromatin silencing and mating-type specification in budding yeast
    1
    1. scibot 23 Sep 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.27991

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    elifesciences.org/articles/27991
  4. academic.oup.com academic.oup.com
    SRPRISM (Single Read Paired Read Indel Substitution Minimizer): an efficient aligner for assemblies with explicit guarantees
    1
    1. scibot 23 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa023

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    academic.oup.com/gigascience/article/9/4/giaa023/5823174
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng
    1
    1. scibot 23 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giz164

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    ncbi.nlm.nih.gov/pmc/articles/PMC6964648/
  6. academic.oup.com academic.oup.com
    Genomic consequences of dietary diversification and parallel evolution due to nectarivory in leaf-nosed bats
    1
    1. scibot 17 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa059

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    academic.oup.com/gigascience/article/9/6/giaa059/5854408
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhanced Detection of DNA Viruses in the Cerebrospinal Fluid of Encephalitis Patients Using Metagenomic Next-Generation Sequencing
    1
    1. scibot 17 Sep 2020
      RRID:SCR_010910

      DOI: 10.3389/fmicb.2020.01879

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    ncbi.nlm.nih.gov/pmc/articles/PMC7435129/
  8. www.sciencedirect.com www.sciencedirect.com
    Senescence-Induced Vascular Remodeling Creates Therapeutic Vulnerabilities in Pancreas Cancer
    1
    1. scibot 17 Sep 2020
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      DOI: 10.1016/j.cell.2020.03.008

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    sciencedirect.com/science/article/pii/S0092867420302701
  9. academic.oup.com academic.oup.com
    Introgression of Eastern Chinese and Southern Chinese haplotypes contributes to the improvement of fertility and immunity in European modern pigs
    1
    1. scibot 17 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa014

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    academic.oup.com/gigascience/article/9/3/giaa014/5788434
  10. academic.oup.com academic.oup.com
    Generation of a chromosome-scale genome assembly of the insect-repellent terpenoid-producing Lamiaceae species, Callicarpa americana
    1
    1. scibot 17 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa093

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    academic.oup.com/gigascience/article/9/9/giaa093/5902285
  11. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
    1
    1. scibot 16 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa092

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    academic.oup.com/gigascience/article/9/8/giaa092/5897807
  12. www.frontiersin.org www.frontiersin.org
    A Preliminary Study to Investigate the Genetic Background of Longevity Based on Whole-Genome Sequence Data of Two Methuselah Dogs
    1
    1. scibot 16 Sep 2020
      RRID:SCR_010910

      DOI: 10.3389/fgene.2020.00315

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    frontiersin.org/article/10.3389/fgene.2020.00315/full
  13. www.mdpi.com www.mdpi.com
    Investigating Human Mitochondrial Genomes in Single Cells
    1
    1. scibot 16 Sep 2020
      RRID:SCR_010910

      DOI: 10.3390/genes11050534

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    mdpi.com/2073-4425/11/5/534
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Global genome diversity of the Leishmania donovani complex
    1
    1. scibot 16 Sep 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.51243

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    ncbi.nlm.nih.gov/pmc/articles/PMC7105377/
  15. onlinelibrary.wiley.com onlinelibrary.wiley.com
    A novel composition of two heterozygous GFM1 mutations in a Chinese child with epilepsy and mental retardation
    1
    1. scibot 15 Sep 2020
      RRID:SCR_010910

      DOI: 10.1002/brb3.1791

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    onlinelibrary.wiley.com/doi/10.1002/brb3.1791
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality reference genome of wild Cannabis sativa
    1
    1. scibot 14 Sep 2020
      RRID:SCR_010910

      DOI: 10.1038/s41438-020-0295-3

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    ncbi.nlm.nih.gov/pmc/articles/PMC7195422/
  17. academic.oup.com academic.oup.com
    De novo assembly of the cattle reference genome with single-molecule sequencing
    1
    1. scibot 13 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa021

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    academic.oup.com/gigascience/article/9/3/giaa021/5810242
  18. www.sciencedirect.com www.sciencedirect.com
    Gut-Liver Physiomimetics Reveal Paradoxical Modulation of IBD-Related Inflammation by Short-Chain Fatty Acids
    1
    1. scibot 13 Sep 2020
      RRID:SCR_010910

      DOI: 10.1016/j.cels.2020.02.008

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    sciencedirect.com/science/article/pii/S2405471220300788
  19. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
    1
    1. scibot 11 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa020

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    academic.oup.com/gigascience/article/9/3/giaa020/5810243
  20. www.cell.com www.cell.com
    Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains
    1
    1. scibot 10 Sep 2020
      RRID:SCR_010910

      DOI: 10.1016/j.molcel.2018.11.006

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    cell.com/molecular-cell/abstract/S1097-2765(18)30948-1
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The role of Rif1 in telomere length regulation is separable from its role in origin firing
    1
    1. scibot 08 Sep 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.58066

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    ncbi.nlm.nih.gov/pmc/articles/PMC7371424/
  22. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of Nanopore Sequencing, Bionano and Hi‐C technology
    1
    1. scibot 08 Sep 2020
      RRID:SCR_010910

      DOI: 10.1111/1755-0998.13190

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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13190
  23. academic.oup.com academic.oup.com
    Continuous chromosome-scale haplotypes assembled from a single interspecies F1 hybrid of yak and cattle
    1
    1. scibot 05 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa029

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    academic.oup.com/gigascience/article/9/4/giaa029/5815405
  24. academic.oup.com academic.oup.com
    Chromosome-level genome assembly and annotation of the loquat ( Eriobotrya japonica ) genome
    1
    1. scibot 05 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa015

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    academic.oup.com/gigascience/article/9/3/giaa015/5788433
  25. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Novel and de novo point and large microdeletion mutation in PRRT2‐related epilepsy
    1
    1. scibot 04 Sep 2020
      RRID:SCR_010910

      DOI: 10.1002/brb3.1597

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    onlinelibrary.wiley.com/doi/10.1002/brb3.1597
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Expandable and reversible copy number amplification drives rapid adaptation to antifungal drugs
    1
    1. scibot 04 Sep 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.58349

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    ncbi.nlm.nih.gov/pmc/articles/PMC7371428/
  27. academic.oup.com academic.oup.com
    Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
    1
    1. scibot 03 Sep 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giaa006

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    academic.oup.com/gigascience/article/9/2/giaa006/5758190
  28. Jan 2020
  29. www.sciencedirect.com www.sciencedirect.com
    The Ovulatory Signal Precipitates LRH-1 Transcriptional Switching Mediated by Differential Chromatin Accessibility
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.1016/j.celrep.2019.07.088

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    sciencedirect.com/science/article/pii/S2211124719310046
  30. academic.oup.com academic.oup.com
    An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giz093

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    academic.oup.com/gigascience/article/8/8/giz093/5542322
  31. www.sciencedirect.com www.sciencedirect.com
    RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.1016/j.molcel.2019.06.033

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    sciencedirect.com/science/article/pii/S1097276519304903
  32. academic.oup.com academic.oup.com
    Hybrid de novo genome assembly of Chinese chestnut ( Castanea mollissima )
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giz112

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    academic.oup.com/gigascience/article/8/9/giz112/5568369
  33. www.nature.com www.nature.com
    A de novo genome assembly of the dwarfing pear rootstock Zhongai 1
    1
    1. scibot 13 Jan 2020
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      DOI: 10.1038/s41597-019-0291-3

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    nature.com/articles/s41597-019-0291-3
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pseudomolecule-level assembly of the Chinese oil tree yellowhorn (Xanthoceras sorbifolium) genome
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giz070

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    ncbi.nlm.nih.gov/pmc/articles/PMC6593361/
  35. elifesciences.org elifesciences.org
    Large, three-generation human families reveal post-zygotic mosaicism and variability in germline mutation accumulation
    1
    1. scibot 13 Jan 2020
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      DOI: 10.7554/eLife.46922

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    elifesciences.org/articles/46922
  36. elifesciences.org elifesciences.org
    The role of structural pleiotropy and regulatory evolution in the retention of heteromers of paralogs
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.46754

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    elifesciences.org/articles/46754
  37. academic.oup.com academic.oup.com
    Chromosome-level assembly of the mustache toad genome using third-generation DNA sequencing and Hi-C analysis
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.1093/gigascience/giz114

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    academic.oup.com/gigascience/article/8/9/giz114/5572531
  38. elifesciences.org elifesciences.org
    Lmx1b is required at multiple stages to build expansive serotonergic axon architectures
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.48788

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    elifesciences.org/articles/48788
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Live-cell imaging reveals enhancer-dependent Sox2 transcription in the absence of enhancer proximity
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.41769

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    ncbi.nlm.nih.gov/pmc/articles/PMC6534382/
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome plasticity in Candida albicans is driven by long repeat sequences
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.45954

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    ncbi.nlm.nih.gov/pmc/articles/PMC6591007/
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human pancreatic cancer cell exosomes, but not human normal cell exosomes, act as an initiator in cell transformation
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.7554/eLife.40226

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    ncbi.nlm.nih.gov/pmc/articles/PMC6538373/
  42. www.sciencedirect.com www.sciencedirect.com
    The piRNA Response to Retroviral Invasion of the Koala Genome
    1
    1. scibot 13 Jan 2020
      RRID:SCR_010910

      DOI: 10.1016/j.cell.2019.09.002

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    sciencedirect.com/science/article/pii/S0092867419310086
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The transcription factor odd-paired regulates temporal identity in transit-amplifying neural progenitors via an incoherent feed-forward loop
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    Genome-wide Analyses of Chromatin State in Human Mast Cells Reveal Molecular Drivers and Mediators of Allergic and Inflammatory Diseases
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    Nanopore Sequencing and De Novo Assembly of a Black-Shelled Pacific Oyster (Crassostrea gigas) Genome
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    Assessment of human diploid genome assembly with 10x Linked-Reads data
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    Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy ( Coilia nasus ) provides novel insights into migratory adaptation
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      DOI: 10.1093/gigascience/giz157

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    A high-quality genome assembly for the endangered golden snub-nosed monkey (Rhinopithecus roxellana)
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    Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin–producing Escherichia coli
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    A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity
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    Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research
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    Combining genomics and epidemiology to analyse bi-directional transmission of Mycobacterium bovis in a multi-host system
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    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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    Chromosomal-level assembly of the blood clam, Scapharca ( Anadara ) broughtonii , using long sequence reads and Hi-C
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      DOI: 10.1093/gigascience/giz067

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    Chromosomal-level reference genome of Chinese peacock butterfly ( Papilio bianor ) based on third-generation DNA sequencing and Hi-C analysis
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    A large interactive visual database of copy number variants discovered in taurine cattle
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  57. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818)
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    A Unique Epigenomic Landscape Defines Human Erythropoiesis
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    Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration
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    Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks
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    A chromosome-level draft genome of the grain aphid Sitobion miscanthi
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    A Pan-cancer Transcriptome Analysis Reveals Pervasive Regulation through Alternative Promoters
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    Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome
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    A chromosomal-level genome assembly for the giant African snail Achatina fulica
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    Mitochondrially-targeted APOBEC1 is a potent mtDNA mutator affecting mitochondrial function and organismal fitness in Drosophila
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    A draft genome assembly of halophyte Suaeda aralocaspica, a plant that performs C4 photosynthesis within individual cells
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    A chromosome-scale genome assembly of cucumber (Cucumis sativus L.)
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    An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi)
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    Oncogenic Notch Promotes Long-Range Regulatory Interactions within Hyperconnected 3D Cliques
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    De novo genome assembly of the white-spotted flower chafer (Protaetia brevitarsis)
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      DOI: 10.1093/gigascience/giz019

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    Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise
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    A near-chromosome-scale genome assembly of the gemsbok (Oryx gazella): an iconic antelope of the Kalahari desert
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      DOI: 10.1093/gigascience/giy162

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    De novo assembly of the Indian blue peacock ( Pavo cristatus ) genome using Oxford Nanopore technology and Illumina sequencing
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      DOI: 10.1016/j.molcel.2018.11.006

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  84. academic.oup.com academic.oup.com
    Linking genetic, metabolic, and phenotypic diversity among Saccharomyces cerevisiae strains using multi-omics associations
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      RRID:SCR_010910

      DOI: 10.1093/gigascience/giz015

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  85. Nov 2018
  86. www.sciencedirect.com www.sciencedirect.com
    Mutational Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in Brain Tumor
    1
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      BWA

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  87. www.sciencedirect.com www.sciencedirect.com
    The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory
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  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhanced ER proteostasis and temperature differentially impact the mutational tolerance of influenza hemagglutinin
    1
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  90. www.sciencedirect.com www.sciencedirect.com
    Genetic Modulation of RNA Splicing with a CRISPR-Guided Cytidine Deaminase
    1
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      Burrows-Wheeler Aligner

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  91. www.sciencedirect.com www.sciencedirect.com
    ZFX Mediates Non-canonical Oncogenic Functions of the Androgen Receptor Splice Variant 7 in Castrate-Resistant Prostate Cancer
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    1. scibot 05 Nov 2018
      BWA

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  92. www.sciencedirect.com www.sciencedirect.com
    Epigenetic Restoration of Fetal-like IGF1 Signaling Inhibits Leukemia Stem Cell Activity
    1
    1. scibot 05 Nov 2018
      RRID:SCR_010910

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  93. academic.oup.com academic.oup.com
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  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6129957/
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6136493/
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  99. www.sciencedirect.com www.sciencedirect.com
    LC3-Associated Phagocytosis in Myeloid Cells Promotes Tumor Immune Tolerance
    1
    1. scibot 05 Nov 2018
      BWA

      Curator: @Jmenke

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  100. academic.oup.com academic.oup.com
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    A Bacterial Chromosome Structuring Protein Binds Overtwisted DNA to Stimulate Type II Topoisomerases and Enable DNA Replication
    1
    1. scibot 05 Nov 2018
      BWA

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    The Evf2 Ultraconserved Enhancer lncRNA Functionally and Spatially Organizes Megabase Distant Genes in the Developing Forebrain
    1
    1. scibot 05 Nov 2018
      bwa

      Curator: @Jmenke

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    Identification of Therapeutic Targets in Rhabdomyosarcoma through Integrated Genomic, Epigenomic, and Proteomic Analyses
    1
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      BWA

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    Architectural Proteins and Pluripotency Factors Cooperate to Orchestrate the Transcriptional Response of hESCs to Temperature Stress
    1
    1. scibot 05 Nov 2018
      BWA

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    Coordinated Control of mRNA and rRNA Processing Controls Embryonic Stem Cell Pluripotency and Differentiation
    1
    1. scibot 05 Nov 2018
      BWA

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    sciencedirect.com/science/article/pii/S0092867418309541
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    nature.com/articles/s41598-018-29993-4
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    Systematic Study of Nucleosome-Displacing Factors in Budding Yeast
    1
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    The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes
    1
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    Radiologic and Genomic Evolution of Individual Metastases during HER2 Blockade in Colorectal Cancer
    1
    1. scibot 05 Nov 2018
      BWA-mem

      Curator: @anp055

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  117. academic.oup.com academic.oup.com
    Evidence of evolutionary history and selective sweeps in the genome of Meishan pig reveals its genetic and phenotypic characterization
    1
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  118. academic.oup.com academic.oup.com
    Fast-SG: an alignment-free algorithm for hybrid assembly
    1
    1. scibot 05 Nov 2018
      Bwa

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  119. academic.oup.com academic.oup.com
    De novo genome assembly of the red silk cotton tree (Bombax ceiba)
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      RRID:SCR_010910

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  120. academic.oup.com academic.oup.com
    Population genomic data reveal genes related to important traits of quail
    1
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  122. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Fusarium graminearum Histone Acetyltransferases Are Important for Morphogenesis, DON Biosynthesis, and Pathogenicity
    1
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      Burrows-Wheeler Aligner

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    Molecular, Pathological, Radiological, and Immune Profiling of Non-brainstem Pediatric High-Grade Glioma from the HERBY Phase II Randomized Trial
    1
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      bwa

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    Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly
    1
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  126. academic.oup.com academic.oup.com
    Whole-genome sequences of 89 Chinese sheep suggest role of RXFP2 in the development of unique horn phenotype as response to semi-feralization
    1
    1. scibot 05 Nov 2018
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  127. www.sciencedirect.com www.sciencedirect.com
    Chemoresistance Evolution in Triple-Negative Breast Cancer Delineated by Single-Cell Sequencing
    1
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  128. academic.oup.com academic.oup.com
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  129. academic.oup.com academic.oup.com
    Real-time DNA barcoding in a rainforest using nanopore sequencing: opportunities for rapid biodiversity assessments and local capacity building
    1
    1. scibot 05 Nov 2018
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  130. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  131. academic-oup-com.ezproxy.rice.edu academic-oup-com.ezproxy.rice.edu
    Efficient generation of complete sequences of MDR-encoding plasmids by rapid assembly of MinION barcoding sequencing data
    1
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    academic-oup-com.ezproxy.rice.edu/gigascience/article-abstract/7/3/gix132/4794946
  132. www.cell.com www.cell.com
    The Immune Landscape of Cancer
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    cell.com/immunity/references/S1074-7613(18)30121-3
  133. europepmc.org europepmc.org
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  134. europepmc.org europepmc.org
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    europepmc.org/abstract/MED/29112761
  135. europepmc.org europepmc.org
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  136. europepmc.org europepmc.org
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  137. elifesciences.org elifesciences.org
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  138. europepmc.org europepmc.org
    BS-virus-finder: virus integration calling using bisulfite sequencing data.
    1
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  139. elifesciences.org elifesciences.org
    Explosive mutation accumulation triggered by heterozygous human Pol ε proofreading-deficiency is driven by suppression of mismatch repair
    1
    1. scibot 05 Nov 2018
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  140. www.sciencedirect.com www.sciencedirect.com
    Comparative Heterochromatin Profiling Reveals Conserved and Unique Epigenome Signatures Linked to Adaptation and Development of Malaria Parasites
    1
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  141. www.sciencedirect.com www.sciencedirect.com
    The Transcription Factor STAT6 Mediates Direct Repression of Inflammatory Enhancers and Limits Activation of Alternatively Polarized Macrophages
    1
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  142. www.sciencedirect.com www.sciencedirect.com
    Genomic Analysis of Demographic History and Ecological Niche Modeling in the Endangered Sumatran Rhinoceros Dicerorhinus sumatrensis
    1
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      Burrows Wheeler Aligner Program (BWA)

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    sciencedirect.com/science/article/pii/S0960982217314665
  143. europepmc.org europepmc.org
    Genome sequence of the small brown planthopper, Laodelphax striatellus.
    1
    1. scibot 05 Nov 2018
      RRID:SCR_010910

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    europepmc.org/articles/PMC5740986/
  144. europepmc.org europepmc.org
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    europepmc.org/articles/PMC5751067/
  145. europepmc.org europepmc.org
    Draft genome of the reindeer (Rangifer tarandus).
    1
    1. scibot 05 Nov 2018
      RRID:SCR_010910

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  146. www.sciencedirect.com www.sciencedirect.com
    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
    1
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  147. europepmc.org europepmc.org
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    europepmc.org/articles/PMC5779231/
  148. academic.oup.com academic.oup.com
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  149. www.sciencedirect.com www.sciencedirect.com
    Genetic and Functional Drivers of Diffuse Large B Cell Lymphoma
    1
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  150. academic.oup.com academic.oup.com
    CNVcaller: highly efficient and widely applicable software for detecting copy number variations in large populations
    1
    1. scibot 05 Nov 2018
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  151. academic.oup.com academic.oup.com
    Panax ginseng genome examination for ginsenoside biosynthesis
    1
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  152. academic.oup.com academic.oup.com
    Filling reference gaps via assembling DNA barcodes using high-throughput sequencing—moving toward barcoding the world
    1
    1. scibot 05 Nov 2018
      RRID:SCR_010910

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  153. europepmc.org europepmc.org
    A map of human PRDM9 binding provides evidence for novel behaviors of PRDM9 and other zinc-finger proteins in meiosis.
    1
    1. scibot 05 Nov 2018
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    europepmc.org/articles/PMC5705219/
  154. www.sciencedirect.com www.sciencedirect.com
    The Stone Age Plague and Its Persistence in Eurasia
    1
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  155. europepmc.org europepmc.org
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    europepmc.org/articles/PMC5603765/
  156. europepmc.org europepmc.org
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  157. Nov 2017
  158. academic.oup.com academic.oup.com
    The draft genome of blunt snout bream (Megalobrama amblycephala) reveals the development of intermuscular bone and adaptation to herbivorous diet
    1
    1. scibot 08 Nov 2017
      RRID:SCR_010910

      Curator: @chewbeccax

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  159. www.sciencedirect.com www.sciencedirect.com
    40,000-Year-Old Individual from Asia Provides Insight into Early Population Structure in Eurasia
    1
    1. scibot 08 Nov 2017
      RRID:SCR_010910

      Curator: @Jmenke

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  160. academic.oup.com academic.oup.com
    Population-wide sampling of retrotransposon insertion polymorphisms using deep sequencing and efficient detection
    1
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      RRID:SCR_010910

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  161. academic.oup.com academic.oup.com
    Untitled document
    1
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      RRID:SCR_010910

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  162. www.sciencedirect.com www.sciencedirect.com
    Adaptive Chromatin Remodeling Drives Glioblastoma Stem Cell Plasticity and Drug Tolerance
    1
    1. scibot 08 Nov 2017
      BWA

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  163. www.sciencedirect.com www.sciencedirect.com
    Adaptive Evolution Leads to Cross-Species Incompatibility in the piRNA Transposon Silencing Machinery
    1
    1. scibot 08 Nov 2017
      BWA

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  164. www.sciencedirect.com www.sciencedirect.com
    Polycomb Repressive Complex 1 Generates Discrete Compacted Domains that Change during Differentiation
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @Jmenke

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  165. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative performance of the BGISEQ-500 vs Illumina HiSeq2500 sequencing platforms for palaeogenomic sequencing
    2
    1. scibot 08 Nov 2017
      RRID:SCR_010910

      Curator: @patriciaelyse_

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    2. scibot 08 Nov 2017
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    ncbi.nlm.nih.gov/pmc/articles/PMC5570000/
  166. www.sciencedirect.com www.sciencedirect.com
    ERK-Induced Activation of TCF Family of SRF Cofactors Initiates a Chromatin Modification Cascade Associated with Transcription
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @Jmenke

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  167. www.sciencedirect.com www.sciencedirect.com
    A CRISPR Resource for Individual, Combinatorial, or Multiplexed Gene Knockout
    1
    1. scibot 08 Nov 2017
      RRID:SCR_010910

      Curator: @Jmenke

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

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      RRID:SCR_010910
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    sciencedirect.com/science/article/pii/S1097276517304641
  168. www.sciencedirect.com www.sciencedirect.com
    Extensive Farming in Estonia Started through a Sex-Biased Migration from the Steppe
    1
    1. scibot 08 Nov 2017
      SCR_010910

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Validated
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    sciencedirect.com/science/article/pii/S0960982217307248
  169. www.sciencedirect.com www.sciencedirect.com
    The Discovery of Wild Date Palms in Oman Reveals a Complex Domestication History Involving Centers in the Middle East and Africa
    1
    1. scibot 08 Nov 2017
      SCR_010910

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Validated
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    sciencedirect.com/science/article/pii/S0960982217307820
  170. www.sciencedirect.com www.sciencedirect.com
    The U6 snRNA m6A Methyltransferase METTL16 Regulates SAM Synthetase Intron Retention
    1
    1. scibot 08 Nov 2017
      bwa

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867417305305
  171. elifesciences.org elifesciences.org
    A large gene family in fission yeast encodes spore killers that subvert Mendel’s law
    1
    1. scibot 08 Nov 2017
      SCR_010910

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Validated
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    elifesciences.org/articles/26057
  172. www.sciencedirect.com www.sciencedirect.com
    Hybrid Cellular Metabolism Coordinated by Zic3 and Esrrb Synergistically Enhances Induction of Naive Pluripotency
    1
    1. scibot 08 Nov 2017
      BWA 0.6.2

      Curator: @Zeljana_Babic

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S155041311730222X
  173. www.sciencedirect.com www.sciencedirect.com
    Large-Scale Profiling Reveals the Influence of Genetic Variation on Gene Expression in Human Induced Pluripotent Stem Cells
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @Zeljana_Babic

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S1934590917300802
  174. www.sciencedirect.com www.sciencedirect.com
    Derivation of Pluripotent Stem Cells with In Vivo Embryonic and Extraembryonic Potency
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @gabimpine

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867417301836
  175. www.sciencedirect.com www.sciencedirect.com
    H3K4 Methylation-Dependent Memory of Somatic Cell Identity Inhibits Reprogramming and Development of Nuclear Transfer Embryos
    1
    1. scibot 08 Nov 2017
      BWA (version 0.6.2)

      Curator: @Zeljana_Babic

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S1934590917300747
  176. www.sciencedirect.com www.sciencedirect.com
    Gene Resistance to Transcriptional Reprogramming following Nuclear Transfer Is Directly Mediated by Multiple Chromatin-Repressive Pathways
    1
    1. scibot 08 Nov 2017
      BWA 0.6.2-r126-TPX

      Curator: @Zeljana_Babic

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S1097276517300564
  177. www.sciencedirect.com www.sciencedirect.com
    The Landscape of Mouse Meiotic Double-Strand Break Formation, Processing, and Repair
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @Zeljana_Babic

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867416313174
  178. www.sciencedirect.com www.sciencedirect.com
    Histone Acetylome-wide Association Study of Autism Spectrum Disorder
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867416314519
  179. www.sciencedirect.com www.sciencedirect.com
    Destabilization of B2 RNA by EZH2 Activates the Stress Response
    1
    1. scibot 08 Nov 2017
      bwa.0.5.5

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867416316518
  180. www.sciencedirect.com www.sciencedirect.com
    Genomic Nucleosome Organization Reconstituted with Pure Proteins
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @Zeljana_Babic

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867416313307
  181. www.sciencedirect.com www.sciencedirect.com
    CpG Island Hypermethylation Mediated by DNMT3A Is a Consequence of AML Progression
    1
    1. scibot 08 Nov 2017
      Bwa

      Curator: @kaitlinsung

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S009286741730106X
  182. www.sciencedirect.com www.sciencedirect.com
    Mutations in Human Accelerated Regions Disrupt Cognition and Social Behavior
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867416311692
  183. www.sciencedirect.com www.sciencedirect.com
    Inheritable Silencing of Endogenous Genes by Hit-and-Run Targeted Epigenetic Editing
    1
    1. scibot 08 Nov 2017
      bwa

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867416312363
  184. www.sciencedirect.com www.sciencedirect.com
    A Single-Cell Transcriptome Atlas of the Human Pancreas
    1
    1. scibot 08 Nov 2017
      Bwa

      Curator: @gabimpine

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S2405471216302927
  185. www.sciencedirect.com www.sciencedirect.com
    A Biobank of Breast Cancer Explants with Preserved Intra-tumor Heterogeneity to Screen Anticancer Compounds
    1
    1. scibot 08 Nov 2017
      bwa

      Curator: @gabimpine

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0092867416311382
  186. www.sciencedirect.com www.sciencedirect.com
    Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts
    1
    1. scibot 08 Nov 2017
      SCR_010910

      Curator: @chewbeccax

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Validated
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    sciencedirect.com/science/article/pii/S0092867416310716
  187. www.sciencedirect.com www.sciencedirect.com
    Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing
    1
    1. scibot 08 Nov 2017
      BWA

      Curator: @gabimpine

      Resource used:

      (BWA, RRID:SCR_010910)

      SciCrunch record: RRID:SCR_010910

      Alternate resolvers: SciCrunch xml N2T identifiers.org

      What is this?

      RRID:SCR_010910 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0012160616301257