475 Matching Annotations
  1. Nov 2017
  2. www.sciencedirect.com www.sciencedirect.com
    A Modular Platform for Differentiation of Human PSCs into All Major Ectodermal Lineages
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1934590917303338
  3. www.sciencedirect.com www.sciencedirect.com
    Polycomb Repressive Complex 1 Generates Discrete Compacted Domains that Change during Differentiation
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1097276517300357
  4. www.sciencedirect.com www.sciencedirect.com
    LMO1 Synergizes with MYCN to Promote Neuroblastoma Initiation and Metastasis
    1
    1. scibot 08 Nov 2017
      Tophat 2.0.14

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1535610817303458
  5. www.sciencedirect.com www.sciencedirect.com
    Global Inhibition with Specific Activation: How p53 and MYC Redistribute the Transcriptome in the DNA Double-Strand Break Response
    1
    1. scibot 08 Nov 2017
      RRID:SCR_013035

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1097276517305749
  6. www.sciencedirect.com www.sciencedirect.com
    Prostaglandin E1 and Its Analog Misoprostol Inhibit Human CML Stem Cell Self-Renewal via EP4 Receptor Activation and Repression of AP-1
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1934590917303193
  7. www.sciencedirect.com www.sciencedirect.com
    The Short Isoform of BRD4 Promotes HIV-1 Latency by Engaging Repressive SWI/SNF Chromatin-Remodeling Complexes
    1
    1. scibot 08 Nov 2017
      Tophat2

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S109727651730549X
  8. www.sciencedirect.com www.sciencedirect.com
    In Situ Capture of Chromatin Interactions by Biotinylated dCas9
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S0092867417308917
  9. www.sciencedirect.com www.sciencedirect.com
    HBL1 Is a Human Long Noncoding RNA that Modulates Cardiomyocyte Development from Pluripotent Stem Cells by Counteracting MIR1
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1534580717305993
  10. www.sciencedirect.com www.sciencedirect.com
    Antagonistic Activities of Sox2 and Brachyury Control the Fate Choice of Neuro-Mesodermal Progenitors
    1
    1. scibot 08 Nov 2017
      Tophat2

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S153458071730597X
  11. www.sciencedirect.com www.sciencedirect.com
    Anti-Inflammatory Chromatinscape Suggests Alternative Mechanisms of Glucocorticoid Receptor Action
    1
    1. scibot 08 Nov 2017
      TopHat v. 2.0.8

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1074761317303199
  12. academic.oup.com academic.oup.com
    Untitled document
    1
    1. scibot 08 Nov 2017
      RRID:SCR_013035

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    academic.oup.com/gigascience/article/6/6/1/3798566/Draft-genome-sequence-of-the-Tibetan-medicinal
  13. www.sciencedirect.com www.sciencedirect.com
    Recruited Monocytes and Type 2 Immunity Promote Lung Regeneration following Pneumonectomy
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1934590917300954
  14. www.sciencedirect.com www.sciencedirect.com
    Satb1 Regulates Contactin 5 to Pattern Dendrites of a Mammalian Retinal Ganglion Cell
    1
    1. scibot 08 Nov 2017
      RRID:SCR_013035

      Curator: @patriciaelyse_

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    sciencedirect.com/science/article/pii/S0896627317306414
  15. europepmc.org europepmc.org
    Dosage compensation and sex-specific epigenetic landscape of the X chromosome in the pea aphid.
    1
    1. scibot 08 Nov 2017
      RRID:SCR_013035

      Curator: @Jmenke

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    europepmc.org/articles/PMC5471693/
  16. www.sciencedirect.com www.sciencedirect.com
    Enhancer Reprogramming Promotes Pancreatic Cancer Metastasis
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S0092867417308140
  17. www.sciencedirect.com www.sciencedirect.com
    Identification of a Brainstem Circuit Controlling Feeding
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S009286741730764X
  18. academic.oup.com academic.oup.com
    RNA Sequencing Exposes Adaptive and Immune Responses to Intrauterine Growth Restriction in Fetal Sheep Islets
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    academic.oup.com/endo/article/158/4/743/2991881/RNA-Sequencing-Exposes-Adaptive-and-Immune
  19. www.sciencedirect.com www.sciencedirect.com
    Body Temperature Cycles Control Rhythmic Alternative Splicing in Mammals
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1097276517304082
  20. www.sciencedirect.com www.sciencedirect.com
    Intestinal Enteroendocrine Lineage Cells Possess Homeostatic and Injury-Inducible Stem Cell Activity
    1
    1. scibot 08 Nov 2017
      TopHat2

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1934590917302400
  21. www.jneurosci.org www.jneurosci.org
    Truncated TrkB.T1-Mediated Astrocyte Dysfunction Contributes to Impaired Motor Function and Neuropathic Pain after Spinal Cord Injury
    1
    1. scibot 08 Nov 2017
      SCR_013035

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    jneurosci.org/content/37/14/3956
  22. www.sciencedirect.com www.sciencedirect.com
    The RNA Surveillance Factor UPF1 Represses Myogenesis via Its E3 Ubiquitin Ligase Activity
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1097276517303982
  23. bmcbiol.biomedcentral.com bmcbiol.biomedcentral.com
    Mov10 suppresses retroelements and regulates neuronal development and function in the developing brain
    1
    1. scibot 08 Nov 2017
      SCR_013035

      Curator: @chewbeccax

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    bmcbiol.biomedcentral.com/articles/10.1186/s12915-017-0387-1
  24. www.sciencedirect.com www.sciencedirect.com
    Dynamic Reorganization of Chromatin Accessibility Signatures during Dedifferentiation of Secretory Precursors into Lgr5+ Intestinal Stem Cells
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1934590917301662
  25. www.sciencedirect.com www.sciencedirect.com
    Enterochromaffin Cells Are Gut Chemosensors that Couple to Sensory Neural Pathways
    1
    1. scibot 08 Nov 2017
      TopHat2

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0092867417305950
  26. www.sciencedirect.com www.sciencedirect.com
    TERRA RNA Antagonizes ATRX and Protects Telomeres
    1
    1. scibot 08 Nov 2017
      TopHat2

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0092867417307006
  27. www.sciencedirect.com www.sciencedirect.com
    Interrupted Glucagon Signaling Reveals Hepatic α Cell Axis and Role for L-Glutamine in α Cell Proliferation
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1550413117303005
  28. www.sciencedirect.com www.sciencedirect.com
    Amino Acid Transporter Slc38a5 Controls Glucagon Receptor Inhibition-Induced Pancreatic α Cell Hyperplasia in Mice
    1
    1. scibot 08 Nov 2017
      TopHat2

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1550413117302942
  29. www.sciencedirect.com www.sciencedirect.com
    Coordinated circRNA Biogenesis and Function with NF90/NF110 in Viral Infection
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1097276517303635
  30. www.sciencedirect.com www.sciencedirect.com
    SAF-A Regulates Interphase Chromosome Structure through Oligomerization with Chromatin-Associated RNAs
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0092867417305901
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mice deficient of Myc super-enhancer region reveal differential control mechanism between normal and pathological growth
    1
    1. scibot 08 Nov 2017
      SCR_013035

      Curator: @gabimpine

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    ncbi.nlm.nih.gov/pmc/articles/PMC5461110/
  32. www.sciencedirect.com www.sciencedirect.com
    Interferon-λ Mediates Non-redundant Front-Line Antiviral Protection against Influenza Virus Infection without Compromising Host Fitness
    1
    1. scibot 08 Nov 2017
      SCR_013035

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    sciencedirect.com/science/article/pii/S1074761317301905
  33. www.sciencedirect.com www.sciencedirect.com
    The RNA Exosome Syncs IAV-RNAPII Transcription to Promote Viral Ribogenesis and Infectivity
    1
    1. scibot 08 Nov 2017
      TopHat 2.0.12

      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S0092867417304725
  34. www.sciencedirect.com www.sciencedirect.com
    Deciphering Pancreatic Islet β Cell and α Cell Maturation Pathways and Characteristic Features at the Single-Cell Level
    1
    1. scibot 08 Nov 2017
      TopHat2

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1550413117302085
  35. www.sciencedirect.com www.sciencedirect.com
    Single-Cell RNA-Seq Analysis Maps Development of Human Germline Cells and Gonadal Niche Interactions
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S1934590917300784
  36. www.sciencedirect.com www.sciencedirect.com
    A Gene Regulatory Network Balances Neural and Mesoderm Specification during Vertebrate Trunk Development
    1
    1. scibot 08 Nov 2017
      Tophat v2.0.9

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1534580717302952
  37. www.sciencedirect.com www.sciencedirect.com
    A Global View of RNA-Protein Interactions Identifies Post-transcriptional Regulators of Root Hair Cell Fate
    1
    1. scibot 08 Nov 2017
      TopHat v2.0.10

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1534580717302022
  38. www.sciencedirect.com www.sciencedirect.com
    Aubergine Controls Germline Stem Cell Self-Renewal and Progeny Differentiation via Distinct Mechanisms
    1
    1. scibot 08 Nov 2017
      TopHat v2.0.13

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1534580717302095
  39. www.sciencedirect.com www.sciencedirect.com
    Transcriptional Dependencies in Diffuse Intrinsic Pontine Glioma
    1
    1. scibot 08 Nov 2017
      Tophat2 v2.0.13

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1535610817301071
  40. www.sciencedirect.com www.sciencedirect.com
    TIAM1 Antagonizes TAZ/YAP Both in the Destruction Complex in the Cytoplasm and in the Nucleus to Inhibit Invasion of Intestinal Epithelial Cells
    1
    1. scibot 08 Nov 2017
      Tophat2

      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S1535610817301034
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-wide identification of neuronal activity-regulated genes in Drosophila
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @chewbeccax

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    ncbi.nlm.nih.gov/pmc/articles/PMC5148613/
  42. www.sciencedirect.com www.sciencedirect.com
    Derivation of Pluripotent Stem Cells with In Vivo Embryonic and Extraembryonic Potency
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @gabimpine

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    sciencedirect.com/science/article/pii/S0092867417301836
  43. www.sciencedirect.com www.sciencedirect.com
    5′ End Nicotinamide Adenine Dinucleotide Cap in Human Cells Promotes RNA Decay through DXO-Mediated deNADding
    1
    1. scibot 08 Nov 2017
      Tophat, v.2.1.1

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S0092867417301976
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    Super-Enhancer-Mediated RNA Processing Revealed by Integrative MicroRNA Network Analysis
    1
    1. scibot 08 Nov 2017
      Tophat

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    sciencedirect.com/science/article/pii/S0092867417301939
  45. www.sciencedirect.com www.sciencedirect.com
    Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis
    1
    1. scibot 08 Nov 2017
      Tophat2

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1097276517301326
  46. www.sciencedirect.com www.sciencedirect.com
    Commensal Microbes and Hair Follicle Morphogenesis Coordinately Drive Treg Migration into Neonatal Skin
    1
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    sciencedirect.com/science/article/pii/S1931312817301117
  47. www.sciencedirect.com www.sciencedirect.com
    H3K4 Methylation-Dependent Memory of Somatic Cell Identity Inhibits Reprogramming and Development of Nuclear Transfer Embryos
    1
    1. scibot 08 Nov 2017
      TopHat 2.0.6

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    sciencedirect.com/science/article/pii/S1934590917300747
  48. www.sciencedirect.com www.sciencedirect.com
    A Viral Immunoevasin Controls Innate Immunity by Targeting the Prototypical Natural Killer Cell Receptor Family
    1
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      SCR_013035

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    sciencedirect.com/science/article/pii/S0092867417302507
  49. www.sciencedirect.com www.sciencedirect.com
    miR-219 Cooperates with miR-338 in Myelination and Promotes Myelin Repair in the CNS
    1
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      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S1534580717301223
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    m6A Demethylase ALKBH5 Maintains Tumorigenicity of Glioblastoma Stem-like Cells by Sustaining FOXM1 Expression and Cell Proliferation Program
    1
    1. scibot 08 Nov 2017
      Tophat v2.0.14

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    sciencedirect.com/science/article/pii/S1535610817300569
  51. www.sciencedirect.com www.sciencedirect.com
    Resolving Heart Regeneration by Replacement Histone Profiling
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1534580717300400
  52. www.sciencedirect.com www.sciencedirect.com
    Multilayered Control of Alternative Splicing Regulatory Networks by Transcription Factors
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @gabimpine

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    sciencedirect.com/science/article/pii/S1097276517300370
  53. www.sciencedirect.com www.sciencedirect.com
    Gene Resistance to Transcriptional Reprogramming following Nuclear Transfer Is Directly Mediated by Multiple Chromatin-Repressive Pathways
    1
    1. scibot 08 Nov 2017
      TopHat version 2.0.6

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    sciencedirect.com/science/article/pii/S1097276517300564
  54. www.sciencedirect.com www.sciencedirect.com
    Identification of an RNA Polymerase III Regulator Linked to Disease-Associated Protein Aggregation
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S1097276517301375
  55. www.sciencedirect.com www.sciencedirect.com
    BTBD18 Regulates a Subset of piRNA-Generating Loci through Transcription Elongation in Mice
    1
    1. scibot 08 Nov 2017
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      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S153458071730076X
  56. www.sciencedirect.com www.sciencedirect.com
    Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations
    1
    1. scibot 08 Nov 2017
      TopHat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0092867416315240
  57. www.sciencedirect.com www.sciencedirect.com
    Epigenetic Memory Underlies Cell-Autonomous Heterogeneous Behavior of Hematopoietic Stem Cells
    1
    1. scibot 08 Nov 2017
      tophat2

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0092867416314660
  58. www.sciencedirect.com www.sciencedirect.com
    Insights into Nucleosome Organization in Mouse Embryonic Stem Cells through Chemical Mapping
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0092867416315100
  59. www.sciencedirect.com www.sciencedirect.com
    Destabilization of B2 RNA by EZH2 Activates the Stress Response
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0092867416316518
  60. www.sciencedirect.com www.sciencedirect.com
    Therapeutic Targeting of MLL Degradation Pathways in MLL-Rearranged Leukemia
    1
    1. scibot 08 Nov 2017
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      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S0092867416316853
  61. www.sciencedirect.com www.sciencedirect.com
    CpG Island Hypermethylation Mediated by DNMT3A Is a Consequence of AML Progression
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S009286741730106X
  62. elifesciences.org elifesciences.org
    Epigenetic regulation of lateralized fetal spinal gene expression underlies hemispheric asymmetries
    1
    1. scibot 08 Nov 2017
      SCR_013035

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    elifesciences.org/articles/22784
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic evidence that Nkx2.2 acts primarily downstream of Neurog3 in pancreatic endocrine lineage development
    1
    1. scibot 08 Nov 2017
      Tophat

      Curator: @gabimpine

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    ncbi.nlm.nih.gov/pmc/articles/PMC5224921/
  64. www.sciencedirect.com www.sciencedirect.com
    Not All H3K4 Methylations Are Created Equal: Mll2/COMPASS Dependency in Primordial Germ Cell Specification
    1
    1. scibot 08 Nov 2017
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    sciencedirect.com/science/article/pii/S1097276517300394
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Hydrogel scaffolds promote neural gene expression and structural reorganization in human astrocyte cultures
    1
    1. scibot 08 Nov 2017
      TopHat software

      Curator: @Zeljana_Babic

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    ncbi.nlm.nih.gov/pmc/articles/PMC5234438/
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An alternative splicing program promotes adipose tissue thermogenesis
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      Tophat2

      Curator: @gabimpine

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    ncbi.nlm.nih.gov/pmc/articles/PMC5026472/
  67. www.sciencedirect.com www.sciencedirect.com
    Cell-Type-Specific Alternative Splicing Governs Cell Fate in the Developing Cerebral Cortex
    1
    1. scibot 08 Nov 2017
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    sciencedirect.com/science/article/pii/S0092867416309321
  68. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Gene expression profiling of granule cells and Purkinje cells in the zebrafish cerebellum
    1
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    onlinelibrary.wiley.com/doi/10.1002/cne.24114/full
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Auxin production in the endosperm drives seed coat development in Arabidopsis
    2
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      SCR_013035

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    ncbi.nlm.nih.gov/pmc/articles/PMC5135394/
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of ZBTB20 impairs circadian output and leads to unimodal behavioral rhythms
    1
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      SCR_013035

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    ncbi.nlm.nih.gov/pmc/articles/PMC5033604/
  71. elifesciences.org elifesciences.org
    Splicing repression allows the gradual emergence of new Alu-exons in primate evolution
    1
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      SCR_013035

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    elifesciences.org/articles/19545
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MEF2C regulates cortical inhibitory and excitatory synapses and behaviors relevant to neurodevelopmental disorders
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      SCR_013035

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    ncbi.nlm.nih.gov/pmc/articles/PMC5094851/
  73. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Female rat transcriptome response to infraorbital nerve transection differs from that of males: RNA‐seq
    1
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      TOPHAT v. 2.0.10

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    onlinelibrary.wiley.com/doi/10.1002/cne.24045/full
  74. www.sciencedirect.com www.sciencedirect.com
    Somatodendritic Expression of JAM2 Inhibits Oligodendrocyte Myelination
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    sciencedirect.com/science/article/pii/S0896627316304068
  75. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Transcriptome response to infraorbital nerve transection in the gonadally intact male rat barrel cortex: RNA‐seq
    1
    1. scibot 08 Nov 2017
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      Curator: @jcabotaj

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    onlinelibrary.wiley.com/doi/10.1002/cne.23831/full