Hypothesis

526 Matching Annotations

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54.241.53.176 54.241.53.176

2026.02.12.705483.full-html.html

1
1. scibot 19 Feb 2026
  
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  SCR_013035
  
  DOI: 10.64898/2026.02.12.705483
  
  Resource: TopHat (RRID:SCR_013035)
  
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54.241.53.176/e417c792f55970f31d0a8038bf2e5c0f6db5e57a/2026.02.12.705483.full-html.html
spj.science.org spj.science.org

Tumor Exosomal L1 Cell Adhesion Molecule Promotes Brain Metastasis of Lung Cancer

1
1. scibot 19 Feb 2026
  
  in Public
  
  RRID:SCR_013035
  
  DOI: 10.34133/research.1126
  
  Resource: TopHat (RRID:SCR_013035)
  
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spj.science.org/doi/10.34133/research.1126
Feb 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Tumor Exosomal L1 Cell Adhesion Molecule Promotes Brain Metastasis of Lung Cancer

1
1. scibot 12 Feb 2026
  
  in Public
  
  RRID:SCR_013035
  
  DOI: 10.34133/research.1126
  
  Resource: TopHat (RRID:SCR_013035)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12886715/
Nov 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Targeting cancer glutamine dependency with a first-in-class inhibitor of the mitochondrial glutamine transporter SLC1A5_var

1
1. scibot 07 Nov 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1038/s41467-025-64730-2
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @evieth
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12583703/
Oct 2025
54.241.53.176 54.241.53.176

1-s2.0-S2589004225021212-main-html.html

1
1. scibot 28 Oct 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1016/j.isci.2025.113860
  
  Resource: TopHat (RRID:SCR_013035)
  
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54.241.53.176/2543dd15e67a90e11255f0d1e268aefce844b497/1-s2.0-S2589004225021212-main-html.html
May 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Antitumor CD4+ T Helper 1 Cells Target and Control the Outgrowth of Disseminated Cancer Cells

1
1. scibot 21 May 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1158/2326-6066.CIR-24-0630
  
  Resource: TopHat (RRID:SCR_013035)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12046335/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Treatment Efficacy and Molecular Dynamics of Neoadjuvant Durvalumab and Olaparib in Resectable Urothelial Bladder Cancer: The NEODURVARIB Trial

1
1. scibot 20 May 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1158/1078-0432.CCR-24-2890
  
  Resource: TopHat (RRID:SCR_013035)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12010967/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Mitochondrial fatty acid oxidation regulates adult muscle stem cell function through modulating metabolic flux and protein acetylation

1
1. scibot 16 May 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1038/s44318-025-00397-1
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @evieth
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12048568/
Mar 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

NXP800 Activates the Unfolded Protein Response, Altering AR and E2F Function to Impact Castration-Resistant Prostate Cancer Growth

1
1. scibot 19 Mar 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1158/1078-0432.CCR-24-2386
  
  Resource: TopHat (RRID:SCR_013035)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11911806/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Multiomics analysis provides insights into musk secretion in muskrat and musk deer

1
1. scibot 07 Mar 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1093/gigascience/giaf006
  
  Resource: TopHat (RRID:SCR_013035)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11878540/
Feb 2025
aacrjournals.org aacrjournals.org

Adenosine-deaminase-acting-on-RNA-1 facilitates T-cell migration toward human melanoma cells

1
1. scibot 20 Feb 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1158/2326-6066.CIR-21-0643
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @scibot
  
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aacrjournals.org/cancerimmunolres/article/10/9/1127/708044/Adenosine-Deaminase-Acting-on-RNA-1-Facilitates-T
aacrjournals.org aacrjournals.org

Interferon-a potentiates anti-PD-1 efficacy by remodeling glucose metabolism in the hepatocellular carcinoma microenvironment

1
1. scibot 14 Feb 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1158/2159-8290.CD-21-1022
  
  Resource: TopHat (RRID:SCR_013035)
  
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aacrjournals.org/cancerdiscovery/article/12/7/1718/705192/IFN-Potentiates-Anti-PD-1-Efficacy-by-Remodeling
www.sciencedirect.com www.sciencedirect.com

Inositol polyphosphate multikinase regulates Th1 and Th17 cell differentiation by controlling Akt-mTOR signaling

1
1. scibot 13 Feb 2025
  
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  RRID:SCR_013035
  
  DOI: 10.1016/j.celrep.2025.115281
  
  Resource: TopHat (RRID:SCR_013035)
  
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sciencedirect.com/science/article/pii/S221112472500052X
onlinelibrary.wiley.com onlinelibrary.wiley.com

Untitled document

11
1. scibot 11 Feb 2025
  
  in Public
  
  OMICS_01257
  
  DOI: 10.1002/cne.23989
  
  Resource: None
  
  Curator: @sjvitug
  
  SciCrunch record: RRID:SCR_013035
  
  What is this?
  
  RRID:SCR_013035 RRIDCUR:Unresolved
2. scibot 10 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
3. scibot 09 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
4. scibot 08 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
5. scibot 07 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
6. scibot 06 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
7. scibot 05 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
8. scibot 04 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
9. scibot 03 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
10. scibot 02 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
11. scibot 01 Feb 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
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URL

onlinelibrary.wiley.com/doi/10.1002/cne.23989/abstract
Jan 2025
onlinelibrary.wiley.com onlinelibrary.wiley.com

Untitled document

25
1. scibot 31 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
2. scibot 30 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
3. scibot 29 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
4. scibot 28 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
5. scibot 27 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
6. scibot 26 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
7. scibot 25 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
8. scibot 24 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
9. scibot 23 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
10. scibot 22 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
11. scibot 21 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
12. scibot 20 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
13. scibot 19 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
14. scibot 18 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
15. scibot 17 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
16. scibot 16 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
17. scibot 15 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
18. scibot 14 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
19. scibot 13 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
20. scibot 12 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
21. scibot 11 Jan 2025
  
  in Public
  
  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_013035 RRIDCUR:Unresolved
22. scibot 10 Jan 2025
  
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24. scibot 08 Jan 2025
  
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  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_013035
25. scibot 07 Jan 2025
  
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  OMICS_01257
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
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A high-quality assembly revealing the PMEL gene for the unique plumage phenotype in Liancheng ducks

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Satb1 regulates Contactin 5 to pattern dendrites of a mammalian retinal ganglion cell

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MITF Targets in Gastrointestinal Stromal Tumors: Implications in Autophagy and Extracellular Vesicle Secretion

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Multiple approaches converge on three biological subtypes of meningioma and extract new insights from published studies

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Drought-induced molecular changes in crown of various barley phytohormone mutants

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Inflammatory Stimuli Trigger Increased Androgen Production and Shifts in Gene Expression in Theca-Interstitial Cells

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Transcriptomic analysis of the hippocampus from six inbred strains of mice suggests a basis for sex‐specific susceptibility and severity of neurological disorders

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Analyzing embryo dormancy at single-cell resolution reveals dynamic transcriptional responses and activation of integrin-Yap/Taz prosurvival signaling

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Drought-induced molecular changes in crown of various barley phytohormone mutants

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Impacts of in-vitro zebularine treatment on genome-wide DNA methylation and transcriptomic profiles in Salix purpurea L.

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Surgical tumour resection deregulates Hallmarks of Cancer in resected tissue and the surrounding microenvironment

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May 2024
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mcr-23-0265-html.html

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ALK inhibitors suppress HCC and synergize with anti-PD-1 therapy and ABT-263 in preclinical models

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PALB2-mutated human mammary cells display a broad spectrum of morphological and functional abnormalities induced by increased TGFβ signaling

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Chromosome level genome assembly and transcriptome analysis of E11 cells infected by tilapia lake virus

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Treatment response in first-line metastatic pancreatic ductal adenocarcinoma is stratified by a composite index of tumor proliferation and CD8 T cell infiltration

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Molecular-guided therapy for the treatment of patients with relapsed and refractory childhood cancers: a Beat Childhood Cancer Research Consortium trial

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Recurrent Phases of Strict Protein Limitation Inhibit Tumor Growth and Restore Lifespan in A Drosophila Intestinal Cancer Model

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Genomic exploration of the targets of FOXL2 and ESR2 unveils their implication in cell migration, invasion, and adhesion

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Gain-of-function p53 mutation acts as a genetic switch for TGF-β signaling-induced epithelial-to-mesenchymal transition in intestinal tumors

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Dec 2023
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Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family

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Glucose stress causes mRNA retention in nuclear Nab2 condensates

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Integration of transcriptomes of senescent cell models with multi-tissue patient samples reveals reduced COL6A3 as an inducer of senescence

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Targeting MALAT1 Augments Sensitivity to PARP Inhibition by Impairing Homologous Recombination in Prostate Cancer

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Perturbations in 3D genome organization can promote acquired drug resistance

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Discovery of Biomarkers Related to Interstitial Fibrosis and Tubular Atrophy among Kidney Transplant Recipients by mRNA-Sequencing

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Jun 2023
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Apoptotic extracellular vesicle formation via local phosphatidylserine exposure drives efficient cell extrusion

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Annexin A1 is a cell-intrinsic metalloregulator of zinc in human ILC2s

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Genomic and Transcriptomic Analysis of Relapsed and Refractory Childhood Solid Tumors Reveals a Diverse Molecular Landscape and Mechanisms of Immune Evasion

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Enhanced glutaminolysis drives hypoxia-induced chemoresistance in pancreatic cancer

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Evolutionary analysis of cellular reduction and anaerobicity in the hyper-prevalent gut microbe Blastocystis

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Transcriptional dynamics of delaminating neuroblasts in the mouse otic vesicle

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An isoform of the giant protein titin is a master regulator of human T lymphocyte trafficking

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Mbnl2 loss alters novel context processing and impairs object recognition memory

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Synaptic hyperexcitability of cytomegalic pyramidal neurons contributes to epileptogenesis in tuberous sclerosis complex

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Mar 2023
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HOXB3 drives WNT-activation associated progression in castration-resistant prostate cancer

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CHD1 promotes sensitivity to Aurora kinase inhibitors by suppressing interaction of AURKA with its coactivator TPX2

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Inhibition of karyopherin β1-mediated nuclear import disrupts oncogenic lineage- defining transcription factor activity in small cell lung cancer

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A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340

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Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson’s disease

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Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms

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Transcriptome profiling disclosed the effect of single and combined drought and heat stress on reprogramming of genes expression in barley flag leaf

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Jan 2023
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Rewiring of hormones and light response pathways underlies the inhibition of stomatal development in an amphibious plant Rorippa aquatica underwater

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Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure

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BioViz Connect: Web Application Linking CyVerse Cloud Resources to Genomic Visualization in the Integrated Genome Browser

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FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits

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Oct 2022
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Interleukin-33-activated neuropeptide CGRP-producing memory Th2 cells cooperate with somatosensory neurons to induce conjunctival itch

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Characterization of cellular senescence in aging skeletal muscle

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Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi

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A small proportion of X-linked genes contribute to X chromosome upregulation in early embryos via BRD4-mediated transcriptional activation

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The human mitochondrial genome contains a second light strand promoter

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Aug 2022
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can-22-0631-html.html

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The transcription factor Tbx5 regulates direction-selective retinal ganglion cell development and image stabilization

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Jul 2022
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cir-21-0643-html.html

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can-21-3713-html.html

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Epigenetic modifier SMCHD1 maintains a normal pool of long-term hematopoietic stem cells.

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Single B Cell Gene Co-Expression Networks Implicated in Prognosis, Proliferation, and Therapeutic Responses in Non-Small Cell Lung Cancer Bulk Tumors

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Jun 2022
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cd-21-1022-html.html

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Inflammaging is driven by upregulation of innate immune receptors and systemic interferon signaling and is ameliorated by dietary restriction

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Hepatitis, testicular degeneration, and ataxia in DIDO3-deficient mice with altered mRNA processing

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Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine

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Mediator recruits the cohesin loader Scc2 to RNA Pol II-transcribed genes and promotes sister chromatid cohesion

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The assembled and annotated genome of the masked palm civet (Paguma larvata)

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Apr 2022
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Sex disparities in influenza: A multiscale network analysis

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A high-quality assembled genome and its comparative analysis decode the adaptive molecular mechanism of the number one Chinese cotton variety CRI-12

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Genome sequence of the Japanese oak silk moth, Antheraea yamamai: the first draft genome in the family Saturniidae

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Multiple approaches converge on three biological subtypes of meningioma and extract new insights from published studies

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The new Haemaphysalis longicornis genome provides insights into its requisite biological traits

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Age-associated decline of MondoA drives cellular senescence through impaired autophagy and mitochondrial homeostasis

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Genetic Liability for Internalizing Versus Externalizing Behavior Manifests in the Developing and Adult Hippocampus: Insight From a Meta-analysis of Transcriptional Profiling Studies in a Selectively Bred Rat Model

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Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data

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Chromosome-level genome assembly of the shuttles hoppfish, Periophthalmus modestus

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lncRNA BORG:TRIM28 Complexes Drive Metastatic Progression by Inducing α6 Integrin/CD49f Expression in Breast Cancer Stem Cells

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An avian embryo patient-derived xenograft model for preclinical studies of human breast cancers

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Pre-existing chromatin accessibility and gene expression differences among naive CD4+ T cells influence effector potential

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Fragmentation of tissue-resident macrophages during isolation confounds analysis of single-cell preparations from mouse hematopoietic tissues

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3D biomimetic platform reveals the first interactions of the embryo and the maternal blood vessels

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Epithelial-myeloid exchange of MHC class II constrains immunity and microbiota composition

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Patch-seq of mouse DRG neurons reveals candidate genes for specific mechanosensory functions

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BPS Publications

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Multiscale analysis reveals that diet-dependent midgut plasticity emerges from alterations in both stem cell niche coupling and enterocyte size

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TPRG1-AS1 induces RBM24 expression and inhibits liver cancer progression by sponging miR-4691-5p and miR-3659

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A Role for Translational Regulation by S6 Kinase and a Downstream Target in Inflammatory Pain

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Deep evolutionary origin of gamete-directed zygote activation by KNOX/BELL transcription factors in green plants

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Pro-inflammatory β cell small extracellular vesicles induce β cell failure through activation of the CXCL10/CXCR3 axis in diabetes

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Characterizing microRNA-mediated modulation of gene expression noise and its effect on synthetic gene circuits

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Nascent transcript and single-cell RNA-seq analysis defines the mechanism of action of the LSD1 inhibitor INCB059872 in myeloid leukemia

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Auxin requirements for a meristematic state in roots depend on a dual brassinosteroid function

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An essential role for the piRNA pathway in regulating the ribosomal RNA pool in C. elegans

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Altered mitochondria functionality defines a metastatic cell state in lung cancer and creates an exploitable vulnerability

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Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations

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The microbiota coordinates diurnal rhythms in innate immunity with the circadian clock

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Pseudomolecule-level assembly of the Chinese oil tree yellowhorn (Xanthoceras sorbifolium) genome

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The Polycomb-Dependent Epigenome Controls β Cell Dysfunction, Dedifferentiation, and Diabetes

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Hepatocyte-Macrophage Acetoacetate Shuttle Protects against Tissue Fibrosis

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Studying immunotherapy resistance in a melanoma autologous humanized mouse xenograft.

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DUX4-Induced Histone Variants H3.X and H3.Y Mark DUX4 Target Genes for Expression

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NEIL1 and NEIL2 DNA glycosylases protect neural crest development against mitochondrial oxidative stress

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Acute Deletion of METTL14 in β-cells of adult mice results in glucose intolerance

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Genome-wide association and differential expression analysis of salt tolerance in <Emphasis Type="Italic">Gossypium hirsutum</Emphasis> L at the germination stage

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Desmoplasia and oncogene driven acinar-to-ductal metaplasia are concurrent events during acinar cell-derived pancreatic cancer initiation in young adult mice

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Maternal vitamin C regulates reprogramming of DNA methylation and germline development

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FAK activity sustains intrinsic and acquired ovarian cancer resistance to platinum chemotherapy

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Mitochondrial genomic variation drives differential nuclear gene expression in discrete regions of Drosophila gene and protein interaction networks

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CB1 agonism prolongs therapeutic window for hormone replacement in ovariectomized mice

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Transcriptome profiling of developing photoreceptor subtypes reveals candidate genes involved in avian photoreceptor diversification

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Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer

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Binary Fate Choice between Closely Related Interneuronal Types Is Determined by a Fezf1-Dependent Postmitotic Transcriptional Switch

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DUX4-Induced Histone Variants H3.X and H3.Y Mark DUX4 Target Genes for Expression

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Transcriptional profiling aligned with in situ expression image analysis reveals mosaically‐expressed molecular markers for GABA neuron sub‐groups in the ventral tegmental area

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Role of MYC-miR-29-B7-H3 in Medulloblastoma Growth and Angiogenesis

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Intracellular Zn 2+ transients modulate global gene expression in dissociated rat hippocampal neurons

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PDGFR-β Signaling Regulates Cardiomyocyte Proliferation and Myocardial Regeneration

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Translational Regulation of Non-autonomous Mitochondrial Stress Response Promotes Longevity

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HLA Class II Antigen Processing and Presentation Pathway Components Demonstrated by Transcriptome and Protein Analyses of Islet β-Cells From Donors With Type 1 Diabetes

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Antagonizing Increased miR-135a Levels at the Chronic Stage of Experimental TLE Reduces Spontaneous Recurrent Seizures

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  DOI: 10.1093/nar/gky232
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @scibot
  
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  RRID:SCR_013035
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academic.oup.com/nar/article/46/11/5426/4956182
academic.oup.com academic.oup.com

Maser: one-stop platform for NGS big data from analysis to visualization

3
1. scibot 29 Jul 2021
  
  in Public
  
  SCR_013035
  
  DOI: 10.1093/database/bay027
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @evieth
  
  SciCrunch record: RRID:SCR_013035
  
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  RRIDCUR:Duplicate RRIDCUR:Validated RRID:SCR_013035
2. scibot 29 Jul 2021
  
  in Public
  
  SCR_013035
  
  DOI: 10.1093/database/bay027
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @evieth
  
  SciCrunch record: RRID:SCR_013035
  
  What is this?
  
  RRIDCUR:Duplicate RRIDCUR:Validated RRID:SCR_013035
3. scibot 29 Jul 2021
  
  in Public
  
  SCR_013035
  
  DOI: 10.1093/database/bay027
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @evieth
  
  SciCrunch record: RRID:SCR_013035
  
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  RRIDCUR:Validated RRID:SCR_013035
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RRIDCUR:Validated

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scibot

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academic.oup.com/database/article/doi/10.1093/database/bay027/4970007
www.sciencedirect.com www.sciencedirect.com

Transcriptional Feedback Links Lipid Synthesis to Synaptic Vesicle Pools in Drosophila Photoreceptors

1
1. scibot 28 Jul 2021
  
  in Public
  
  RRID: SCR_013035
  
  DOI: 10.1016/j.neuron.2019.01.015
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @ethanbadger
  
  SciCrunch record: RRID:SCR_013035
  
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  RRID:SCR_013035 RRIDCUR:Unrecognized
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RRID:SCR_013035

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sciencedirect.com/science/article/pii/S0896627319300169
onlinelibrary.wiley.com onlinelibrary.wiley.com

Shear stress and oxygen availability drive differential changes in opossum kidney proximal tubule cell metabolism and endocytosis

1
1. scibot 28 Jul 2021
  
  in Public
  
  TopHat2
  
  DOI: 10.1111/tra.12648
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_013035
  
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  RRID:SCR_013035 RRIDCUR:Missing
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onlinelibrary.wiley.com/doi/full/10.1111/tra.12648
elifesciences.org elifesciences.org

Analysis of the genomic architecture of a complex trait locus in hypertensive rat models links Tmem63c to kidney damage

1
1. scibot 28 Jul 2021
  
  in Public
  
  TopHat2
  
  DOI: 10.7554/eLife.42068
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_013035
  
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  RRID:SCR_013035 RRIDCUR:Missing
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elifesciences.org/articles/42068
onlinelibrary.wiley.com onlinelibrary.wiley.com

Analysis of long non‐coding RNA expression profiles in neonatal rats with hypoxic‐ischemic brain damage

1
1. scibot 28 Jul 2021
  
  in Public
  
  TopHat
  
  DOI: 10.1111/jnc.14689
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_013035
  
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  RRID:SCR_013035 RRIDCUR:Missing
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onlinelibrary.wiley.com/doi/full/10.1111/jnc.14689
www.sciencedirect.com www.sciencedirect.com

Reprogramming of Meiotic Chromatin Architecture during Spermatogenesis

1
1. scibot 28 Jul 2021
  
  in Public
  
  TopHat
  
  DOI: 10.1016/j.molcel.2018.11.019
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_013035
  
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  RRID:SCR_013035 RRIDCUR:Missing
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sciencedirect.com/science/article/pii/S1097276518309894
www.sciencedirect.com www.sciencedirect.com

Widespread and Functional RNA Circularization in Localized Prostate Cancer

1
1. scibot 28 Jul 2021
  
  in Public
  
  Tophat
  
  DOI: 10.1016/j.cell.2019.01.025
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_013035
  
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  RRID:SCR_013035 RRIDCUR:Missing
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sciencedirect.com/science/article/pii/S0092867419300583
www.sciencedirect.com www.sciencedirect.com

Ribosomal Proteins Regulate MHC Class I Peptide Generation for Immunosurveillance

1
1. scibot 28 Jul 2021
  
  in Public
  
  Tophat
  
  DOI: 10.1016/j.molcel.2018.12.020
  
  Resource: TopHat (RRID:SCR_013035)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_013035
  
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  RRID:SCR_013035 RRIDCUR:Missing
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scibot

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sciencedirect.com/science/article/pii/S1097276518310967

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