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  1. Feb 2023
  2. link.springer.com link.springer.com
    How Zebrafish Can Drive the Future of Genetic-based Hearing and Balance Research
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    link.springer.com/article/10.1007/s10162-021-00798-z
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    Evaluation of the pathogenesis and treatment of Mycobacterium marinum infection in zebrafish
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    nature.com/articles/nprot.2013.068
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Retrograde Ret signaling controls sensory pioneer axon outgrowth
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    ncbi.nlm.nih.gov/pmc/articles/PMC6718271/
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    Endogenous zebrafish proneural Cre drivers generated by CRISPR/Cas9 short homology directed targeted integration
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    nature.com/articles/s41598-021-81239-y
  6. journals.plos.org journals.plos.org
    Molecular and Cellular Characterization of a Zebrafish Optic Pathway Tumor Line Implicates Glia-Derived Progenitors in Tumorigenesis
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    journals.plos.org/plosone/article
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    Single-cell resolution of MET- and EMT-like programs in osteoblasts during zebrafish fin regeneration
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    sciencedirect.com/science/article/pii/S2589004222000542
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    Aquaculture and Husbandry at the Zebrafish International Resource Center
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    sciencedirect.com/science/article/pii/B9780123748140000240
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    p66Shc is an apoptotic rheostat whose targeted ROS inhibition improves MI outcomes
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    biorxiv.org/content/10.1101/2022.04.14.487897v1
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    Ribosomal protein deficiency causes Tp53-independent erythropoiesis failure in zebrafish
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    sciencedirect.com/science/article/pii/S1357272514000156
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    Advancements in zebrafish applications for 21st century toxicology
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    sciencedirect.com/science/article/pii/S0163725816300171
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    Ccdc94 Protects Cells from Ionizing Radiation by Inhibiting the Expression of p53
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    journals.plos.org/plosgenetics/article
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    Beyond Garfield’s Citation Index: an assessment of some issues in building a personal name Acknowledgments Index
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    link.springer.com/article/10.1007/s11192-017-2598-1
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    GCNA Preserves Genome Integrity and Fertility Across Species
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    ncbi.nlm.nih.gov/pmc/articles/PMC6946843/
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    Emerging applications for zebrafish as a model organism to study oxidative mechanisms and their roles in inflammation and vascular accumulation of oxidized lipids
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    sciencedirect.com/science/article/pii/S0891584912004935
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    Bacterial and Fungal Diseases of Zebrafish
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    sciencedirect.com/science/article/pii/B9780128124314000415
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    A novel zebrafish model of hyperthermia-induced seizures reveals a role for TRPV4 channels and NMDA-type glutamate receptors
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    sciencedirect.com/science/article/pii/S0014488612002555
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    Neuroblastoma differentiation in vivo excludes cranial tumors
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    sciencedirect.com/science/article/pii/S1534580721007322
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    In vivo profiling of site-specific human cancer cell states in zebrafish
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    biorxiv.org/content/10.1101/2021.06.09.447621v2
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    Phenylbutyrate Therapy for Pyruvate Dehydrogenase Complex Deficiency and Lactic Acidosis
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    science.org/doi/10.1126/scitranslmed.3004986
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    Dynamics of BMP signaling and distribution during zebrafish dorsal-ventral patterning
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    ncbi.nlm.nih.gov/pmc/articles/PMC5658070/
  22. journals.plos.org journals.plos.org
    Overexpression of Akt1 Enhances Adipogenesis and Leads to Lipoma Formation in Zebrafish
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    journals.plos.org/plosone/article
  23. rupress.org rupress.org
    In vivo 3D profiling of site-specific human cancer cell morphotypes in zebrafish
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    rupress.org/jcb/article/221/11/e202109100/213501/In-vivo-3D-profiling-of-site-specific-human-cancer
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    The Fish Embryo as a Model for AOP Development
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    link.springer.com/chapter/10.1007/978-3-319-66084-4_4
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    Preclinical Studies and Drug Combination of Low-Cost Molecules for Chagas Disease
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    mdpi.com/1424-8247/16/1/20
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    Protocol for analysis of integrin-mediated cell adhesion of lateral plate mesoderm cells isolated from zebrafish embryos
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    sciencedirect.com/science/article/pii/S2666166721001350
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Controlling Endemic Pathogens—Challenges and Opportunities
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    ncbi.nlm.nih.gov/pmc/articles/PMC4931722/
  28. www.biorxiv.org www.biorxiv.org
    A versatile, multi-laser twin-microscope system for light-sheet imaging
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    biorxiv.org/content/10.1101/801688v3
  29. www.biorxiv.org www.biorxiv.org
    Loss of cell cycle control renders cells nonresponsive to local extrinsic differentiation cues
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    biorxiv.org/content/10.1101/720276v1
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    Muscle diseases in the zebrafish
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    sciencedirect.com/science/article/pii/S0960896612001241
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell transcriptome reveals insights into the development and function of the zebrafish ovary
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    ncbi.nlm.nih.gov/pmc/articles/PMC9191896/
  32. bmcdevbiol.biomedcentral.com bmcdevbiol.biomedcentral.com
    SOX10 directly modulates ERBB3 transcription via an intronic neural crest enhancer
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    bmcdevbiol.biomedcentral.com/articles/10.1186/1471-213X-11-40
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    Selecting the Right Species: Practical Information on Organism Models
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    link.springer.com/protocol/10.1007/978-1-4939-2250-5_3
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    Modeling human diseases: an education in interactions and interdisciplinary approaches
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    journals.biologists.com/dmm/article/9/6/597/20135/Modeling-human-diseases-an-education-in
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    The Power of Zebrafish in Personalised Medicine
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    link.springer.com/chapter/10.1007/978-3-319-60733-7_10
  36. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Simple, Economical Heat-Shock Devices for Zebrafish Housing Racks
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    pmc.ncbi.nlm.nih.gov/articles/PMC3241738/
  37. journals.biologists.com journals.biologists.com
    Epigenetic regulators Rbbp4 and Hdac1 are overexpressed in a zebrafish model of RB1 embryonal brain tumor, and are required for neural progenitor survival and proliferation
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    journals.biologists.com/dmm/article/11/6/dmm034124/53326/Epigenetic-regulators-Rbbp4-and-Hdac1-are
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    Selective volume illumination microscopy offers synchronous volumetric imaging with high contrast
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    biorxiv.org/content/10.1101/403303v1
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    Identification and Characterization of Cis-Regulatory Elements for Photoreceptor-Type-Specific Transcription in ZebraFish
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    link.springer.com/protocol/10.1007/978-1-0716-0175-4_10
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Model organisms for functional validation in genetic renal disease
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    ncbi.nlm.nih.gov/pmc/articles/PMC11006349/
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    Sperm cryopreservation, in vitro fertilization, and embryo freezing
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    sciencedirect.com/science/article/pii/B9780128210994000079
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparison of Fixatives, Fixation Time, and Severity of Infection on PCR Amplification and Detection of Mycobacterium marinum and Mycobacterium chelonae DNA in Paraffin-Embedded Zebrafish (Danio rerio)
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    ncbi.nlm.nih.gov/pmc/articles/PMC3707143/
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    Molecular and chemical genetic approaches to developmental origins of aging and disease in zebrafish
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    sciencedirect.com/science/article/pii/S0925443913001543
  44. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Molecular neuroanatomy: a generation of progress
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    pmc.ncbi.nlm.nih.gov/articles/PMC3946666/
  45. www.biorxiv.org www.biorxiv.org
    CIC-DUX4 expression drives the development of small round cell sarcoma in transgenic zebrafish: a new model revealing a role for ETV4 in CIC-mediated sarcomagenesis
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    biorxiv.org/content/10.1101/517722v2
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    Dendrite regeneration in the vertebrate spinal cord
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    sciencedirect.com/science/article/pii/S0012160622001026
  47. www.nature.com www.nature.com
    Efficient genome engineering approaches for the short-lived African turquoise killifish
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    nature.com/articles/nprot.2016.103
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    The African turquoise killifish (Nothobranchius furzeri): biology and research applications
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    sciencedirect.com/science/article/pii/B9780128210994000110
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    Essential Role of Nr2f Nuclear Receptors in Patterning the Vertebrate Upper Jaw
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    sciencedirect.com/science/article/pii/S1534580717310390
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    Fatty liver disease induced by perfluorooctane sulfonate: Novel insight from transcriptome analysis
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    sciencedirect.com/science/article/pii/S004565351630707X
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    Function and Regulation of AUTS2, a Gene Implicated in Autism and Human Evolution
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    Multi-allelic phenotyping – A systematic approach for the simultaneous analysis of multiple induced mutations
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    sciencedirect.com/science/article/pii/S1046202313001175
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    High Content Screening for Modulators of Cardiovascular or Global Developmental Pathways in Zebrafish
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    link.springer.com/protocol/10.1007/978-1-4939-2269-7_13
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    Interrogating Cardiovascular Genetics in Zebrafish
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    link.springer.com/chapter/10.1007/978-3-030-27371-2_9
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    3D MALDI Mass Spectrometry Imaging of a Single Cell: Spatial Mapping of Lipids in the Embryonic Development of Zebrafish
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    nature.com/articles/s41598-017-14949-x
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    Fear responses and antipredatory behavior of zebrafish: a translational perspective
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    sciencedirect.com/science/article/pii/B9780128175286000103
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    Use of the Zebrafish Model to Understand Behavioral Disorders Associated with Altered Oxytocin System Development: Implications for Autism and Prader–Willi Syndrome
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    link.springer.com/protocol/10.1007/978-1-4939-2250-5_18
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    Impact of low-frequency coding variants on human facial shape
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    nature.com/articles/s41598-020-80661-y
  59. journals.physiology.org journals.physiology.org
    Real-time functional analysis of Hv1 channel in neutrophils: a new approach from zebrafish model | American Journal of Physiology-Regulatory, Integrative and Comparative Physiology
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    journals.physiology.org/doi/full/10.1152/ajpregu.00326.2018
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    Health monitoring and disease prevention at the Zebrafish International Resource Center
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    sciencedirect.com/science/article/pii/S0091679X16300541
  61. www.microbiologyresearch.org www.microbiologyresearch.org
    Zebrafish as a model for Vibrio parahaemolyticus virulence
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    microbiologyresearch.org/content/journal/micro/10.1099/mic.0.067637-0
  62. www.biorxiv.org www.biorxiv.org
    Zebrafish models for human ALA-dehydratase-deficient porphyria (ADP) and hereditary coproporphyria (HCP) generated with TALEN and CRISPR-Cas9
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    biorxiv.org/content/10.1101/109553v1
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    A vertebrate model for the study of lipid binding/transfer protein function: Conservation of OSBP-related proteins between zebrafish and human
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    sciencedirect.com/science/article/pii/S0006291X13020585
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Fgf-signaling is compartmentalized within the mesenchyme and controls proliferation during salamander limb development
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    ncbi.nlm.nih.gov/pmc/articles/PMC6754229/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evolution of the head-trunk interface in tetrapod vertebrates
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    ncbi.nlm.nih.gov/pmc/articles/PMC4841772/
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    Lineage tracing of genome-edited alleles reveals high fidelity axolotl limb regeneration
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    ncbi.nlm.nih.gov/pmc/articles/PMC5621835/
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    Sal-Site: Research Resources for the Mexican Axolotl
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    link.springer.com/protocol/10.1007/978-1-4939-2495-0_25
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    Evolutionarily divergent mTOR remodels the translatome to drive rapid wound closure and regeneration
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    biorxiv.org/content/10.1101/2021.10.28.465024v1
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    Novel Expansion of Matrix Metalloproteases in the Laboratory Axolotl (Ambystoma mexicanum) and Other Salamander Species
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    frontiersin.org/articles/10.3389/fevo.2021.786263/full
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    Beryllium nitrate inhibits fibroblast migration to disrupt epimorphic regeneration
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    journals.biologists.com/dev/article/143/19/3491/47683/Beryllium-nitrate-inhibits-fibroblast-migration-to
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    Thermal Sensitivity of Axolotl Feeding Behaviors
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    academic.oup.com/icb/article/61/5/1881/6297219
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    Evidence of positive selection suggests possible role of aquaporins in the water-to-land transition of mudskippers
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    link.springer.com/article/10.1007/s13127-018-0382-6
  73. www.biorxiv.org www.biorxiv.org
    Comparison of Gene Expression During Early Phases of Limb Regeneration Between Regeneration-permissive Neotenic and Regeneration-deficient Metamorphic Axolotl
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    biorxiv.org/content/10.1101/693911v1
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    Health Monitoring for Laboratory Salamanders
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    link.springer.com/protocol/10.1007/978-1-0716-2659-7_3
  75. www.biorxiv.org www.biorxiv.org
    Regenerating axolotl retinas regrow diverse cell types with modulation by Notch signaling and reconnect to the brain
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    biorxiv.org/content/10.1101/2022.04.28.489898v1
  76. journals.biologists.com journals.biologists.com
    BMP signaling is essential for sustaining proximo-distal progression in regenerating axolotl limbs
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    journals.biologists.com/dev/article/147/14/dev170829/224348/BMP-signaling-is-essential-for-sustaining-proximo
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    https://www.ncbi.nlm.nih.gov/pubmed/27549395
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    journals.biologists.com/dev/article/143/19/3481/47687/Activation-of-Smad2-but-not-Smad3-is-required-to
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    Ambiguities in the relationship between gonadal steroids and reproduction in axolotls (Ambystoma mexicanum)
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    sciencedirect.com/science/article/pii/S0016648012000032
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    TMEM16F Forms a Ca2+-Activated Cation Channel Required for Lipid Scrambling in Platelets during Blood Coagulation
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    sciencedirect.com/science/article/pii/S009286741201104X
  80. www.biorxiv.org www.biorxiv.org
    A constitutively expressed fluorescence ubiquitin cell cycle indicator (FUCCI) in axolotls for studying tissue regeneration
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    biorxiv.org/content/10.1101/2021.03.30.437716v1
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    Fluctuation of cellular differentiation in limb regeneration is regulated by Pde4b in urodele amphibians
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    biorxiv.org/content/10.1101/2021.09.13.460030v1
  82. www.nature.com www.nature.com
    Miniscule differences between sex chromosomes in the giant genome of a salamander
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    nature.com/articles/s41598-018-36209-2
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    Transcriptome analysis of axolotl oropharyngeal explants during taste bud differentiation stages
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    sciencedirect.com/science/article/pii/S0925477320300022
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    Usability of deep learning pipelines for 3D nuclei identification with Stardist and Cellpose
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    sciencedirect.com/science/article/pii/S2667290122000420
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    Optogenetic manipulation of cellular communication using engineered myosin motors
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    nature.com/articles/s41556-020-00625-2
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    Exogenous Vitamin D signaling alters skeletal patterning, differentiation, and tissue integration during limb regeneration in the axolotl
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    sciencedirect.com/science/article/pii/S0925477317308213
  87. journals.biologists.com journals.biologists.com
    Blastemal progenitors modulate immune signaling during early limb regeneration
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    journals.biologists.com/dev/article/146/1/dev169128/48774/Blastemal-progenitors-modulate-immune-signaling
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    Dynamic evolution of the GnRH receptor gene family in vertebrates
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    bmcecolevol.biomedcentral.com/articles/10.1186/s12862-014-0215-y
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    Systemic cell cycle activation is induced following complex tissue injury in axolotl
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    sciencedirect.com/science/article/pii/S0012160617301951
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    Workshop report: Cryopreservation of aquatic biomedical models
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    sciencedirect.com/science/article/pii/S0011224018302694
  91. bmcgenomics.biomedcentral.com bmcgenomics.biomedcentral.com
    Variation under domestication in animal models: the case of the Mexican axolotl
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    mdpi.com/1422-0067/19/12/3929
  181. link.springer.com link.springer.com
    A nonclassical MHC class I U lineage locus in zebrafish with a null haplotypic variant
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    link.springer.com/article/10.1007/s00251-015-0862-1
  182. link.springer.com link.springer.com
    The identification of additional zebrafish DICP genes reveals haplotype variation and linkage to MHC class I genes
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    link.springer.com/article/10.1007/s00251-016-0901-6
  183. www.sciencedirect.com www.sciencedirect.com
    A systems toxicological analysis of oxybenzone effects on the metabolic physiology of embryo-larval zebrafish (Danio rerio)
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    sciencedirect.com/science/article/pii/S2666765722001430
  184. www.nature.com www.nature.com
    A systematic genome-wide analysis of zebrafish protein-coding gene function
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    nature.com/articles/nature11992
  185. www.sciencedirect.com www.sciencedirect.com
    Differential regulation of epiboly initiation and progression by zebrafish Eomesodermin A
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    sciencedirect.com/science/article/pii/S0012160611013741
  186. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Activation of Wnt Signaling Using Lithium Chloride: Inquiry-Based Undergraduate Laboratory Exercises
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    ncbi.nlm.nih.gov/pmc/articles/PMC3698625/
  187. link.springer.com link.springer.com
    A zebrafish model of foxe3 deficiency demonstrates lens and eye defects with dysregulation of key genes involved in cataract formation in humans
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    link.springer.com/article/10.1007/s00439-018-1884-1