1 Matching Annotations
  1. Jul 2024
    1. Case: patient #1, female Disease Assertion: UCD/OTCD

      Family Info:

      Case Presenting HPOs: Hyperammonemia (HP:0001987), Juvenile onset (HP:0003621)

      Case HPO FreeText:

      Case NOT HPOs:

      Case NOT HPO Free Text:

      Case Previous Testing: "DNA samples were obtained from either peripheral white blood cells or liver biopsies of probands. Patient 1 total liver RNAs were extracted by the acid-phenol-guanidium method and reverse-transcribed in cDNA by hexanucleotide priming using Superscript 11' (Life Technologies, Cergy-Pantoia, France). First strand cDNA was further PCR-amplified using forward and reverse primers specificons 7 and 9 of the OTC gene, respectively. Sequence comparisons were conducted using the FASTA option of the BISANCE package. Secondary protein conformational changes induced by sequence mutations were predicted using the algorithms of the BISANCE package. Nucleotidic changes potentially altering splice sites were studied using the Senapathy's algorithm from the BISANCE package."

      Supplemental Data: TABLE 1, Notes:

      Variant: NM_000531.6: c.731_739del(p.Leu244Profs)

      ClinVarID: 97307

      CAID: CA224765

      gnomAD:

      Gene Name: OTC (ornithine transcarbamylase)