2 Matching Annotations
  1. Jul 2024
    1. Case: patient #154, male

      Disease Assertion: UCD/OTCD

      Family Info: N/A

      Case Presenting HPOs: Neonatal onset (HP:0003623)

      Case HPO FreeText:

      Case NOT HPOs:

      Case NOT HPO Free Text:

      Case Previous Testing: gDNA testing involves PCR amplification of all 10 exons and exon/intron boundaries followed by screening for mutations or sequencing of all fragments, For these patients, confirmation of the diagnosis requires enzymatic assays. No specifications about the test

      Supplemental Data: TABLE 1

      Variant: NM_000531.6: c.664-1G>A

      ClinVarID: 97288

      CAID: CA224811

      gnomAD:

      Gene Name: OTC (ornithine transcarbamylase)

    1. Case: Patient #59, female, Chinese

      DiseaseAssertion: UCD/OTCD

      FamilyInfo: variant in proband's mother and father

      CasePresentingHPOs: HP:0003621, HP:0001987, HP:0003218, HP:0003217

      CaseHPOFreeText:juvenile onset, hyperammonemia , oroticaciduria, hyperglutaminemia

      CaseNOTHPOs: N/A

      CaseNOTHPOFreeText: No neurological damage

      CasePreviousTesting: gDNA extracted from peripheral blood leukocytes. PCR all coding exons and exon–intron boundaries of the OTC gene using 9 pairs of synthetic oligonucleotide primers, and the primer sequences and annealing temperature. PCR products were then purified and bidirectionally sequenced. The library was sequenced using Illumina HiSeq4000 and generated 150 bp paired-end reads. Data analysis was performed as previously described [Sun Y, Hu G, Liu H, Zhang X, Huang Z, Yan H, et al. Further delineation of the phenotype of truncating KMT2A mutations: the extended Wiedemann–Steiner syndrome. Am J Med Genet A. 2017;173:510–4.]. Multiplex ligation-dependent probe amplification analysis was performed for samples in which Sanger sequencing or WES failed to detect any disease-causing mutation.

      SupplementalData: Table 3, drug treatment(L-arginine, L-Citrulline, sodium benzoate, and sodium phenylbutyrate)

      Variant: NM_000531.6:c.664-1G>A

      ClinVarID: 97288

      CAID: CA224737

      gnomAD:

      GeneName: OTC (ornithine transcarbamylase)