50 Matching Annotations
  1. Mar 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptomic analysis using RNA sequencing and phenotypic analysis of Salmonella enterica after acid exposure for different time durations using adaptive laboratory evolution
    1
    1. scibot 17 Mar 2024
      RRID:SCR_001235

      DOI: 10.3389/fmicb.2024.1348063

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    ncbi.nlm.nih.gov/pmc/articles/PMC10929716/
  3. Jan 2024
  4. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
    1
    1. scibot 18 Jan 2024
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giad110

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    dx.doi.org/10.1093/gigascience/giad110
  5. Dec 2023
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Introgression of pigs in Taihu Lake region possibly contributed to the improvement of fertility in Danish Large White pigs
    1
    1. scibot 07 Dec 2023
      RRID:SCR_001235

      DOI: 10.1186/s12864-023-09860-x

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    ncbi.nlm.nih.gov/pmc/articles/PMC10694980/
  7. www.sciencedirect.com www.sciencedirect.com
    Genetic swamping of the critically endangered Scottish wildcat was recent and accelerated by disease
    1
    1. scibot 02 Dec 2023
      RRID:SCR_001235

      DOI: 10.1016/j.cub.2023.10.026

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    sciencedirect.com/science/article/pii/S0960982223014240
  8. Oct 2023
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction and analysis of the chromosome-level haplotype-resolved genomes of two Crassostrea oyster congeners: Crassostrea angulata and Crassostrea gigas
    1
    1. scibot 05 Oct 2023
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giad077

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    ncbi.nlm.nih.gov/pmc/articles/PMC10546077/
  10. Sep 2023
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Peeling back the layers of coral holobiont multi-omics data
    1
    1. scibot 09 Sep 2023
      RRID:SCR_001235

      DOI: 10.1016/j.isci.2023.107623

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    ncbi.nlm.nih.gov/pmc/articles/PMC10482995/
  12. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
    1
    1. scibot 08 Sep 2023
      RRID:SCR_001235

      DOI: 10.1016/j.celrep.2023.113111

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    sciencedirect.com/science/article/pii/S2211124723011221
  13. Aug 2023
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome resequencing reveals independent domestication and breeding improvement of naked oat
    1
    1. scibot 03 Aug 2023
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giad061

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    ncbi.nlm.nih.gov/pmc/articles/PMC10390318/
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide SNP and Indel Discovery in Abaca (Musa textilis Née) and among Other Musa spp. for Abaca Genetic Resources Management
    1
    1. scibot 01 Aug 2023
      RRID:SCR_001235

      DOI: 10.3390/cimb45070365

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    ncbi.nlm.nih.gov/pmc/articles/PMC10377871/
  16. May 2023
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A workflow reproducibility scale for automatic validation of biological interpretation results
    1
    1. scibot 09 May 2023
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giad031

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    ncbi.nlm.nih.gov/pmc/articles/PMC10164546/
  18. Mar 2023
  19. academic.oup.com academic.oup.com
    Resequencing of a Pekin duck breeding population provides insights into the genomic response to short-term artificial selection
    1
    1. scibot 30 Mar 2023
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giad016

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad016/7086661
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
    1. scibot 29 Mar 2023
      RRID:SCR_001235

      DOI: 10.46471/gigabyte.44

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
    1
    1. scibot 02 Mar 2023
      SCR_001235

      DOI: 10.46471/gigabyte.30

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  22. Nov 2022
  23. academic.oup.com academic.oup.com
    Selection signatures in goats reveal a novel deletion mutant underlying cashmere yield and diameter
    1
    1. scibot 08 Nov 2022
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giac107

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac107/6795292
  24. Sep 2022
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic Diversity and Selective Signature in Dabieshan Cattle Revealed by Whole-Genome Resequencing
    1
    1. scibot 24 Sep 2022
      RRID:SCR_001235

      DOI: 10.3390/biology11091327

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    ncbi.nlm.nih.gov/pmc/articles/PMC9495734/
  26. Jun 2022
  27. www.nature.com www.nature.com
    The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia
    1
    1. scibot 28 Jun 2022
      RRID:SCR_001235

      DOI: 10.1038/s41598-022-14893-5

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    nature.com/articles/s41598-022-14893-5
  28. Apr 2022
  29. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
    1
    1. scibot 07 Apr 2022
      RRID:SCR_001235

      DOI: 10.1016/j.celrep.2022.110638

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    sciencedirect.com/science/article/pii/S2211124722003904
  30. Nov 2021
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A sex-specific evolutionary interaction between ADCY9 and CETP
    1
    1. scibot 19 Nov 2021
      RRID:SCR_001235

      DOI: 10.7554/eLife.69198

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    ncbi.nlm.nih.gov/pmc/articles/PMC8594919/
  32. Oct 2021
  33. www.sciencedirect.com www.sciencedirect.com
    Evolutionary history of the extinct Sardinian dhole
    1
    1. scibot 16 Oct 2021
      RRID:SCR_001235

      DOI: 10.1016/j.cub.2021.09.059

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    sciencedirect.com/science/article/pii/S0960982221013154
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    OptM: estimating the optimal number of migration edges on population trees using Treemix
    1
    1. scibot 02 Oct 2021
      RRID:SCR_001235

      DOI: 10.1093/biomethods/bpab017

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    ncbi.nlm.nih.gov/pmc/articles/PMC8476930/
  35. Aug 2021
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gigwa v2—Extended and improved genotype investigator
    1
    1. scibot 13 Aug 2021
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giz051

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    ncbi.nlm.nih.gov/pmc/articles/PMC6511067/
  37. www.sciencedirect.com www.sciencedirect.com
    Untitled document
    1
    1. scibot 02 Aug 2021
      RRID:SCR_001235

      DOI: 10.1016/j.cub.2018.11.055

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    sciencedirect.com/science/article/pii/S0960982218315549
  38. Jul 2021
  39. elifesciences.org elifesciences.org
    Extensive intraspecies cryptic variation in an ancient embryonic gene regulatory network
    1
    1. scibot 30 Jul 2021
      vcftools

      DOI: 10.7554/eLife.48220

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    elifesciences.org/articles/48220
  40. genome.cshlp.org genome.cshlp.org
    A chromosome-scale assembly of the axolotl genome
    1
    1. scibot 29 Jul 2021
      VCFtools

      DOI: 10.1101/gr.241901.118

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    genome.cshlp.org/content/29/2/317.full
  41. elifesciences.org elifesciences.org
    Analysis of the genomic architecture of a complex trait locus in hypertensive rat models links Tmem63c to kidney damage
    1
    1. scibot 28 Jul 2021
      vcftools

      DOI: 10.7554/eLife.42068

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    elifesciences.org/articles/42068
  42. academic.oup.com academic.oup.com
    Sex-Biased Gene Expression and Dosage Compensation on the Artemia franciscana Z-Chromosome
    1
    1. scibot 28 Jul 2021
      VCFtools

      DOI: 10.1093/gbe/evz053

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    academic.oup.com/gbe/article/11/4/1033/5378701
  43. May 2021
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Morphological and genomic shifts in mole-rat ‘queens’ increase fecundity but reduce skeletal integrity
    1
    1. scibot 13 May 2021
      RRID:SCR_001235

      DOI: 10.7554/eLife.65760

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    ncbi.nlm.nih.gov/pmc/articles/PMC8104968/
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nested association mapping reveals the genetic architecture of spike emergence and anthesis timing in intermediate wheatgrass
    1
    1. scibot 01 May 2021
      RRID:SCR_001235

      DOI: 10.1093/g3journal/jkab025

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    ncbi.nlm.nih.gov/pmc/articles/PMC8063084/
  46. Feb 2021
  47. elifesciences.org elifesciences.org
    Dyshomeostatic modulation of Ca2+-activated K+ channels in a human neuronal model of KCNQ2 encephalopathy
    1
    1. scibot 11 Feb 2021
      RRID:SCR_001235

      DOI: 10.7554/eLife.64434

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    elifesciences.org/articles/64434
  48. Sep 2020
  49. elifesciences.org elifesciences.org
    Temporal network analysis identifies early physiological and transcriptomic indicators of mild drought in Brassica rapa
    1
    1. scibot 26 Sep 2020
      RRID:SCR_001235

      DOI: 10.7554/eLife.29655

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    elifesciences.org/articles/29655
  50. academic.oup.com academic.oup.com
    Genomic analyses reveal distinct genetic architectures and selective pressures in buffaloes
    1
    1. scibot 26 Sep 2020
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giz166

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    academic.oup.com/gigascience/article/9/2/giz166/5743106
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Global genome diversity of the Leishmania donovani complex
    1
    1. scibot 17 Sep 2020
      RRID:SCR_001235

      DOI: 10.7554/eLife.51243

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    ncbi.nlm.nih.gov/pmc/articles/PMC7105377/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
    1
    1. scibot 16 Sep 2020
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giaa088

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    ncbi.nlm.nih.gov/pmc/articles/PMC7433188/
  53. Jan 2020
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved draft genome of the European sardine (Sardina pilchardus)
    1
    1. scibot 13 Jan 2020
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giz059

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    ncbi.nlm.nih.gov/pmc/articles/PMC6528745/
  55. www.sciencedirect.com www.sciencedirect.com
    A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity
    1
    1. scibot 13 Jan 2020
      RRID:SCR_001235

      DOI: 10.1016/j.cell.2019.11.036

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    sciencedirect.com/science/article/pii/S0092867419313212
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human pancreatic cancer cell exosomes, but not human normal cell exosomes, act as an initiator in cell transformation
    1
    1. scibot 13 Jan 2020
      RRID:SCR_001235

      DOI: 10.7554/eLife.40226

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    ncbi.nlm.nih.gov/pmc/articles/PMC6538373/
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Conversion of random X-inactivation to imprinted X-inactivation by maternal PRC2
    1
    1. scibot 13 Jan 2020
      RRID:SCR_001235

      DOI: 10.7554/eLife.44258

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    ncbi.nlm.nih.gov/pmc/articles/PMC6541438/
  58. academic.oup.com academic.oup.com
    Untitled document
    1
    1. scibot 13 Jan 2020
      RRID:SCR_001235

      DOI: 10.1093/gigascience/giz051

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    academic.oup.com/gigascience/article/8/5/giz051/5488103
  59. Nov 2018
  60. academic.oup.com academic.oup.com
    Untitled document
    1
    1. scibot 05 Nov 2018
      RRID:SCR_001235

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    academic.oup.com/gigascience/article/7/9/giy106/5079661
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
    1
    1. scibot 05 Nov 2018
      RRID:SCR_001235

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    ncbi.nlm.nih.gov/pmc/articles/PMC6143732/
  62. www.sciencedirect.com www.sciencedirect.com
    The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes
    1
    1. scibot 05 Nov 2018
      RRID:SCR_001235

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    sciencedirect.com/science/article/pii/S0960982218307024
  63. academic.oup.com academic.oup.com
    Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola
    1
    1. scibot 05 Nov 2018
      RRID:SCR_001235

      Curator: @evieth

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    academic.oup.com/gigascience/article/7/6/giy025/4931057
  64. www.sciencedirect.com www.sciencedirect.com
    Bottlenose Dolphins Retain Individual Vocal Labels in Multi-level Alliances
    1
    1. scibot 05 Nov 2018
      RRID:SCR_001235

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    sciencedirect.com/science/article/pii/S0960982218306158
  65. academic.oup.com academic.oup.com
    Whole-genome resequencing reveals signatures of selection and timing of duck domestication
    1
    1. scibot 05 Nov 2018
      VCFtools

      Curator: @evieth

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      (VCFtools, RRID:SCR_001235)

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    academic.oup.com/gigascience/article/7/4/giy027/4965113
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 05 Nov 2018
      RRID:SCR_001235

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    ncbi.nlm.nih.gov/pmc/articles/PMC5628015/
  67. europepmc.org europepmc.org
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    europepmc.org/articles/PMC5628015/
  68. Nov 2017
  69. www.sciencedirect.com www.sciencedirect.com
    The Discovery of Wild Date Palms in Oman Reveals a Complex Domestication History Involving Centers in the Middle East and Africa
    1
    1. scibot 08 Nov 2017
      SCR_001235

      Curator: @chewbeccax

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    sciencedirect.com/science/article/pii/S0960982217307820
  70. www.cell.com www.cell.com
    Mutation of the Human Circadian Clock Gene CRY1 in Familial Delayed Sleep Phase Disorder
    1
    1. scibot 08 Nov 2017
      VCFtools (version 0.1.11)

      Curator: @Zeljana_Babic

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      (VCFtools, RRID:SCR_001235)

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    cell.com/action/showMethods
  71. www.sciencedirect.com www.sciencedirect.com
    Mutation of the Human Circadian Clock Gene CRY1 in Familial Delayed Sleep Phase Disorder
    1
    1. scibot 08 Nov 2017
      VCFtools

      Curator: @gabimpine

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      (VCFtools, RRID:SCR_001235)

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    sciencedirect.com/science/article/pii/S009286741730346X
  72. www.sciencedirect.com www.sciencedirect.com
    Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts
    1
    1. scibot 08 Nov 2017
      SCR_001235

      Curator: @chewbeccax

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      (VCFtools, RRID:SCR_001235)

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    sciencedirect.com/science/article/pii/S0092867416310716