97 Matching Annotations
  1. Last 7 days
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus
    1
    1. scibot 22 Jun 2024
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giae029

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170218/
  3. Jun 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Uncovering strain- and age-dependent innate immune responses to SARS-CoV-2 infection in air-liquid-interface cultured nasal epithelia
    1
    1. scibot 14 Jun 2024
      RRID:SCR_001757

      DOI: 10.1016/j.isci.2024.110009

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    ncbi.nlm.nih.gov/pmc/articles/PMC11166695/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mechanisms of hepatic steatosis in chickens: integrated analysis of the host genome, molecular phenomics and gut microbiome
    1
    1. scibot 08 Jun 2024
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giae023

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152177/
  6. May 2024
  7. www.sciencedirect.com www.sciencedirect.com
    Ancient genomes revealed the complex human interactions of the ancient western Tibetans
    1
    1. scibot 23 May 2024
      RRID:SCR_001757

      DOI: 10.1016/j.cub.2024.04.068

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    sciencedirect.com/science/article/pii/S0960982224005815
  8. www.sciencedirect.com www.sciencedirect.com
    Genome sequence analyses identify novel risk loci for multiple system atrophy
    1
    1. scibot 03 May 2024
      RRID:SCR_001757

      DOI: 10.1016/j.neuron.2024.04.002

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    sciencedirect.com/science/article/pii/S089662732400240X
  9. www.cell.com www.cell.com
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2
    1
    1. scibot 02 May 2024
      RRID:SCR_001757

      DOI: 10.1016/j.xgen.2024.100556

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    cell.com/cell-genomics/fulltext/S2666-979X(24)00122-8
  10. Apr 2024
  11. dx.doi.org dx.doi.org
    Korea4K: whole genome sequences of 4,157 Koreans with 107 phenotypes derived from extensive health check-ups
    1
    1. scibot 18 Apr 2024
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giae014

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    dx.doi.org/10.1093/gigascience/giae014
  12. Feb 2024
  13. www.biorxiv.org www.biorxiv.org
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
    1
    1. scibot 15 Feb 2024
      RRID:SCR_001757

      DOI: 10.1101/2024.01.28.577610

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    biorxiv.org/content/10.1101/2024.01.28.577610v1
  14. Jan 2024
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Generation of two induced pluripotent stem cell lines from patients with Down syndrome
    1
    1. scibot 24 Jan 2024
      RRID:SCR_001757

      DOI: 10.1016/j.scr.2023.103204

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    ncbi.nlm.nih.gov/pmc/articles/PMC10802983/
  16. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
    1
    1. scibot 18 Jan 2024
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giad110

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    dx.doi.org/10.1093/gigascience/giad110
  17. www.nature.com www.nature.com
    Multi-ancestry genome-wide association meta-analysis of Parkinson’s disease
    1
    1. scibot 07 Jan 2024
      RRID:SCR_001757

      DOI: 10.1038/s41588-023-01584-8

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    nature.com/articles/s41588-023-01584-8
  18. www.sciencedirect.com www.sciencedirect.com
    Genetic insights into carbohydrate sulfotransferase 8 and its impact on the immunotherapy efficacy of cancer
    1
    1. scibot 06 Jan 2024
      RRID:SCR_001757

      DOI: 10.1016/j.celrep.2023.113641

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    sciencedirect.com/science/article/pii/S2211124723016522
  19. Dec 2023
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome-wide association study reveals novel SNP markers associated with resilience traits in two Mediterranean dairy sheep breeds
    1
    1. scibot 10 Dec 2023
      RRID:SCR_001757

      DOI: 10.3389/fgene.2023.1294573

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    ncbi.nlm.nih.gov/pmc/articles/PMC10702769/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Investigation of the genetic aetiology of Lewy body diseases with and without dementia
    1
    1. scibot 02 Dec 2023
      RRID:SCR_001757

      DOI: 10.1101/2023.10.17.23297157

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    ncbi.nlm.nih.gov/pmc/articles/PMC10659505/
  22. Sep 2023
  23. 52.53.155.43 52.53.155.43
    jkad214-html.html
    1
    1. scibot 29 Sep 2023
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      DOI: 10.1093/g3journal/jkad214

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    52.53.155.43/3d9dadcff91e2baad90f130c0ca8d0eaf7826014/jkad214-html.html
  24. 52.53.155.43 52.53.155.43
    jkad203-html.html
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    1. scibot 22 Sep 2023
      RRID:SCR_001757

      DOI: 10.1093/g3journal/jkad203

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    52.53.155.43/213eef494e744243d5c25ee25ef9fbca7c526326/jkad203-html.html
  25. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
    1
    1. scibot 08 Sep 2023
      RRID:SCR_001757

      DOI: 10.1016/j.celrep.2023.113111

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    sciencedirect.com/science/article/pii/S2211124723011221
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic meta-analysis of levodopa induced dyskinesia in Parkinson’s disease
    1
    1. scibot 06 Sep 2023
      RRID:SCR_001757

      DOI: 10.1038/s41531-023-00573-2

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    ncbi.nlm.nih.gov/pmc/articles/PMC10471743/
  27. Aug 2023
  28. www.biorxiv.org www.biorxiv.org
    Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2
    1
    1. scibot 27 Aug 2023
      RRID:SCR_001757

      DOI: 10.1101/2023.08.21.553157

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    biorxiv.org/content/10.1101/2023.08.21.553157v1
  29. www.sciencedirect.com www.sciencedirect.com
    Genome-wide association studies of human and rat BMI converge on synapse, epigenome, and hormone signaling networks
    1
    1. scibot 03 Aug 2023
      RRID:SCR_001757

      DOI: 10.1016/j.celrep.2023.112873

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    sciencedirect.com/science/article/pii/S2211124723008847
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Genetic Locus within the FMN1/GREM1 Gene Region Interacts with Body Mass Index in Colorectal Cancer Risk
    1
    1. scibot 03 Aug 2023
      RRID:SCR_001757

      DOI: 10.1158/0008-5472.CAN-22-3713

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    ncbi.nlm.nih.gov/pmc/articles/PMC10391330/
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome resequencing reveals independent domestication and breeding improvement of naked oat
    1
    1. scibot 03 Aug 2023
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giad061

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    ncbi.nlm.nih.gov/pmc/articles/PMC10390318/
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide SNP and Indel Discovery in Abaca (Musa textilis Née) and among Other Musa spp. for Abaca Genetic Resources Management
    1
    1. scibot 01 Aug 2023
      RRID:SCR_001757

      DOI: 10.3390/cimb45070365

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    ncbi.nlm.nih.gov/pmc/articles/PMC10377871/
  33. Jul 2023
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Race/ethnicity-stratified fine-mapping of the MHC locus reveals genetic variants associated with late-onset asthma
    1
    1. scibot 08 Jul 2023
      RRID:SCR_001757

      DOI: 10.3389/fgene.2023.1173676

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    ncbi.nlm.nih.gov/pmc/articles/PMC10321602/
  35. Jun 2023
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of transcriptional regulatory variants in pig duodenum, liver, and muscle tissues
    1
    1. scibot 27 Jun 2023
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giad042

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    ncbi.nlm.nih.gov/pmc/articles/PMC10290502/
  37. May 2023
  38. 52.53.155.43 52.53.155.43
    SAMHD1 Single Nucleotide Polymorphisms Impact Outcome in Children with Newly Diagnosed Acute Myeloid Leukemia
    1
    1. scibot 19 May 2023
      RRID:SCR_001757

      DOI: 10.1182/bloodadvances.2022009088

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    52.53.155.43/e46a2570775be5482d285d09f4ec299ec4c8d047/RRID7-html.html
  39. www.nature.com www.nature.com
    Germline modifiers of the tumor immune microenvironment implicate drivers of cancer risk and immunotherapy response
    1
    1. scibot 13 May 2023
      RRID:SCR_001757

      DOI: 10.1038/s41467-023-38271-5

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    nature.com/articles/s41467-023-38271-5
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Association between the LRP1B and APOE loci and the development of Parkinson’s disease dementia
    1
    1. scibot 04 May 2023
      RRID:SCR_001757

      DOI: 10.1093/brain/awac414

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    ncbi.nlm.nih.gov/pmc/articles/PMC10151192/
  41. www.mdpi.com www.mdpi.com
    An ABCC9 Missense Variant Is Associated with Sudden Cardiac Death and Dilated Cardiomyopathy in Juvenile Dogs
    1
    1. scibot 04 May 2023
      RRID:SCR_001757

      DOI: 10.3390/genes14050988

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    mdpi.com/2073-4425/14/5/988
  42. Apr 2023
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic prediction in plants: opportunities for ensemble machine learning based approaches
    1
    1. scibot 12 Apr 2023
      RRID:SCR_001757

      DOI: 10.12688/f1000research.122437.2

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    ncbi.nlm.nih.gov/pmc/articles/PMC10080209/
  44. Mar 2023
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
    1. scibot 29 Mar 2023
      RRID:SCR_001757

      DOI: 10.46471/gigabyte.44

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Predicting Cancer Risk from Germline Whole-exome Sequencing Data Using a Novel Context-based Variant Aggregation Approach
    1
    1. scibot 24 Mar 2023
      RRID:SCR_001757

      DOI: 10.1158/2767-9764.CRC-22-0355

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    ncbi.nlm.nih.gov/pmc/articles/PMC10032232/
  47. Feb 2023
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Immunogenetic Determinants of Susceptibility to Head and Neck Cancer in the Million Veteran Program Cohort
    1
    1. scibot 11 Feb 2023
      RRID:SCR_001757

      DOI: 10.1158/0008-5472.CAN-22-1641

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    ncbi.nlm.nih.gov/pmc/articles/PMC9896026/
  49. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
    1
    1. scibot 08 Feb 2023
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giad003

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  50. Jan 2023
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome Reporting for Healthy Populations—Pipeline for Genomic Screening from the GENCOV COVID‐19 Study
    1
    1. scibot 28 Jan 2023
      RRID:SCR_001757

      DOI: 10.1002/cpz1.534

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    ncbi.nlm.nih.gov/pmc/articles/PMC9874607/
  52. academic.oup.com academic.oup.com
    xAtlas: scalable small variant calling across heterogeneous next-generation sequencing experiments
    1
    1. scibot 19 Jan 2023
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giac125

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac125/6987867
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative Genomics Provides Etiologic and Biological Insight into Melanoma Subtypes
    1
    1. scibot 07 Jan 2023
      RRID:SCR_001757

      DOI: 10.1158/2159-8290.CD-22-0603

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    ncbi.nlm.nih.gov/pmc/articles/PMC9716259/
  54. Dec 2022
  55. www.sciencedirect.com www.sciencedirect.com
    Protocol to analyze population structure and migration history based on human genome variation data
    1
    1. scibot 18 Dec 2022
      RRID:SCR_001757

      DOI: 10.1016/j.xpro.2022.101928

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    sciencedirect.com/science/article/pii/S2666166722008085
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRState: Incorporating genetic ancestry in prostate cancer risk scores for men of African ancestry
    1
    1. scibot 13 Dec 2022
      RRID:SCR_001757

      DOI: 10.1186/s12885-022-10258-3

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    ncbi.nlm.nih.gov/pmc/articles/PMC9733391/
  57. Nov 2022
  58. academic.oup.com academic.oup.com
    Selection signatures in goats reveal a novel deletion mutant underlying cashmere yield and diameter
    1
    1. scibot 08 Nov 2022
      RRID:SCR_001757

      DOI: 10.1093/gigascience/giac107

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac107/6795292
  59. Oct 2022
  60. www.sciencedirect.com www.sciencedirect.com
    The HUNT study: A population-based cohort for genetic research
    1
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  61. Sep 2022
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    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
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  65. Jul 2022
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    PRState: Incorporating Genetic Ancestry in Prostate Cancer Risk scores for African American Men
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  70. Jun 2022
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    Cholesterol and matrisome pathways dysregulated in astrocytes and microglia
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  73. Apr 2022
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    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
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  75. Mar 2022
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    Identification of autosomal cis expression quantitative trait methylation (cis eQTMs) in children’s blood
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    GWAS in people of Middle Eastern descent reveals a locus protective of kidney function—a cross-sectional study
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  80. Jan 2022
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    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
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  82. Oct 2021
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    OptM: estimating the optimal number of migration edges on population trees using Treemix
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  84. Sep 2021
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    PLCE1 Polymorphisms Are Associated With Gastric Cancer Risk: The Changes in Protein Spatial Structure May Play a Potential Role
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    F1000Research Article: UKB.COVID19: an R package for UK Biobank COVID-19 data processing and analysis.
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  87. Aug 2021
  88. elifesciences.org elifesciences.org
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  92. Jul 2021
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    F1000Research Article: GARCOM: A user-friendly R package for genetic mutation counts.
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  95. Jun 2021
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    Human population history at the crossroads of East and Southeast Asia since 11,000 years ago
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  97. May 2021
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    The deep population history of northern East Asia from the Late Pleistocene to the Holocene
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  99. Apr 2021
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    Analysis of Brugada syndrome loci reveals that fine-mapping clustered GWAS hits enhances the annotation of disease-relevant variants
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  101. Mar 2021
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    Variants associated with HHIP expression have sex-differential effects on lung function
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  103. Feb 2021
  104. www.nature.com www.nature.com
    Genetic signatures of high-altitude adaptation and geographic distribution in Tibetan sheep
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  105. elifesciences.org elifesciences.org
    Dyshomeostatic modulation of Ca2+-activated K+ channels in a human neuronal model of KCNQ2 encephalopathy
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  106. Dec 2020
  107. academic.oup.com academic.oup.com
    Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation
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  108. Sep 2020
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    Genomic analyses reveal distinct genetic architectures and selective pressures in buffaloes
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    Introgression of Eastern Chinese and Southern Chinese haplotypes contributes to the improvement of fertility and immunity in European modern pigs
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    Genomic analysis reveals selection signatures of the Wannan Black pig during domestication and breeding
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  112. Jan 2020
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    Gene-centric functional dissection of human genetic variation uncovers regulators of hematopoiesis
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    Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy ( Coilia nasus ) provides novel insights into migratory adaptation
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    Extensive intraspecies cryptic variation in an ancient embryonic gene regulatory network
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  116. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human pancreatic cancer cell exosomes, but not human normal cell exosomes, act as an initiator in cell transformation
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    Inherited and De Novo Genetic Risk for Autism Impacts Shared Networks
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  120. academic.oup.com academic.oup.com
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      RRID:SCR_001757

      DOI: 10.1093/gigascience/giz051

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  121. Apr 2019
  122. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic basis of delay discounting in frequent gamblers: examination of a priori candidates and exploration of a panel of dopamine-related loci
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    1. scibot 04 Apr 2019
      nlx_154200

      Curator: @jcabotaj

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    ncbi.nlm.nih.gov/pmc/articles/PMC4212112/
  123. www.sciencedirect.com www.sciencedirect.com
    P16INK4a Upregulation Mediated by SIX6 Defines Retinal Ganglion Cell Pathogenesis in Glaucoma
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    1. scibot 04 Apr 2019
      nlx_154200

      Curator: @gabimpine

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    sciencedirect.com/science/article/pii/S1097276515005857
  124. Nov 2018
  125. academic.oup.com academic.oup.com
    Evidence of evolutionary history and selective sweeps in the genome of Meishan pig reveals its genetic and phenotypic characterization
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    1. scibot 05 Nov 2018
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    academic.oup.com/gigascience/article/7/5/giy058/5001425
  126. academic.oup.com academic.oup.com
    Population genomic data reveal genes related to important traits of quail
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    1. scibot 05 Nov 2018
      RRID:SCR_001757

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  127. academic.oup.com academic.oup.com
    Whole-genome resequencing reveals signatures of selection and timing of duck domestication
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    1. scibot 05 Nov 2018
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    academic.oup.com/gigascience/article/7/4/giy027/4965113
  128. academic.oup.com academic.oup.com
    Whole-genome sequences of 89 Chinese sheep suggest role of RXFP2 in the development of unique horn phenotype as response to semi-feralization
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    1. scibot 05 Nov 2018
      RRID:SCR_001757

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  129. onlinelibrary.wiley.com onlinelibrary.wiley.com
    DLGAP1 and NMDA receptor‐associated postsynaptic density protein genes influence executive function in attention deficit hyperactivity disorder
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    1. scibot 05 Nov 2018
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    onlinelibrary.wiley.com/doi/10.1002/brb3.914/full
  130. www.jneurosci.org www.jneurosci.org
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    jneurosci.org/content/37/43/10389
  131. Nov 2017
  132. elifesciences.org elifesciences.org
    Genetic identification of a common collagen disease in Puerto Ricans via identity-by-descent mapping in a health system
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    1. scibot 08 Nov 2017
      RRID:SCR_001757

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    elifesciences.org/articles/25060
  133. www.sciencedirect.com www.sciencedirect.com
    SUMO-Targeted DNA Translocase Rrp2 Protects the Genome from Top2-Induced DNA Damage
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      pLink

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1097276517302733
  134. www.sciencedirect.com www.sciencedirect.com
    Human Epistatic Interaction Controls IL7R Splicing and Increases Multiple Sclerosis Risk
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      PLINK

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    sciencedirect.com/science/article/pii/S0092867417302866
  135. www.sciencedirect.com www.sciencedirect.com
    Integrating GWAS and Co-expression Network Data Identifies Bone Mineral Density Genes SPTBN1 and MARK3 and an Osteoblast Functional Module
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      Plink v1.9

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    sciencedirect.com/science/article/pii/S2405471216303337
  136. www.sciencedirect.com www.sciencedirect.com
    Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts
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      SCR_001757

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  137. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Possible relationship between common genetic variation and white matter development in a pilot study of preterm infants
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    1. scibot 08 Nov 2017
      PLINK 1.9

      Curator: @gabimpine

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    onlinelibrary.wiley.com/doi/10.1002/brb3.434/full