60 Matching Annotations
  1. Jul 2024
  2. www.sciencedirect.com www.sciencedirect.com
    MYB-related transcription factors control chloroplast biogenesis
    1
    1. scibot 24 Jul 2024
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      DOI: 10.1016/j.cell.2024.06.039

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    sciencedirect.com/science/article/pii/S009286742400713X
  3. Jun 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The clock gene BHLHE40 and atypical CCNG2 control androgen-induced cellular senescence as a novel tumor suppressive pathway in prostate cancer
    1
    1. scibot 27 Jun 2024
      RRID:SCR_003030

      DOI: 10.1186/s13046-024-03097-6

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    ncbi.nlm.nih.gov/pmc/articles/PMC11188219/
  5. Feb 2024
  6. 52.53.155.43 52.53.155.43
    can-23-1129-html.html
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    1. scibot 23 Feb 2024
      SCR_003030

      DOI: 10.1158/0008-5472.can-23-1129

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    52.53.155.43/f18faff86a38ad159824c95dcf032e1a8bb0e968/133-html.html
  7. www.biorxiv.org www.biorxiv.org
    A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer
    1
    1. scibot 09 Feb 2024
      RRID:SCR_003030

      DOI: 10.1101/2023.12.10.570854

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    biorxiv.org/content/10.1101/2023.12.10.570854v1
  8. Jan 2024
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PRDM3/16 Regulate Chromatin Accessibility Required for NKX2-1 Mediated Alveolar Epithelial Differentiation and Function
    1
    1. scibot 20 Jan 2024
      RRID:SCR_003030

      DOI: 10.1101/2023.12.20.570481

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    ncbi.nlm.nih.gov/pmc/articles/PMC10769259/
  10. www.sciencedirect.com www.sciencedirect.com
    Genetic insights into carbohydrate sulfotransferase 8 and its impact on the immunotherapy efficacy of cancer
    1
    1. scibot 06 Jan 2024
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      DOI: 10.1016/j.celrep.2023.113641

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    sciencedirect.com/science/article/pii/S2211124723016522
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Leveraging tissue-specific enhancer-target gene regulatory networks identifies enhancer somatic mutations that functionally impact lung cancer
    1
    1. scibot 05 Jan 2024
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      DOI: 10.1158/0008-5472.CAN-23-1129

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    ncbi.nlm.nih.gov/pmc/articles/PMC10758689/
  12. Dec 2023
  13. www.science.org www.science.org
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    1. scibot 09 Dec 2023
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      DOI: 10.1126/sciadv.adh1914

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    science.org/doi/10.1126/sciadv.adh1914
  14. 52.53.155.43 52.53.155.43
    can-23-1129-html.html
    1
    1. scibot 01 Dec 2023
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      DOI: 10.1158/0008-5472.can-23-1129

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    52.53.155.43/f18faff86a38ad159824c95dcf032e1a8bb0e968/133-html.html
  15. Oct 2023
  16. www.sciencedirect.com www.sciencedirect.com
    Three-dimensional genome architecture coordinates key regulators of lineage specification in mammary epithelial cells
    1
    1. scibot 27 Oct 2023
      RRID:SCR_003030

      DOI: 10.1016/j.xgen.2023.100424

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    sciencedirect.com/science/article/pii/S2666979X23002501
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    1. scibot 14 Oct 2023
      RRID:SCR_003030

      DOI: 10.1126/sciadv.adh1914

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    ncbi.nlm.nih.gov/pmc/articles/PMC10569716/
  18. Feb 2023
  19. www.sciencedirect.com www.sciencedirect.com
    Gestational palmitic acid suppresses embryonic GATA-binding protein 4 signaling and causes congenital heart disease
    1
    1. scibot 23 Feb 2023
      RRID:SCR_003030

      DOI: 10.1016/j.xcrm.2023.100953

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    sciencedirect.com/science/article/pii/S2666379123000459
  20. Dec 2022
  21. aacrjournals.org aacrjournals.org
    TFAP4 activates IGF2BP1 and promotes progression of non-small cell lung cancer by stabilizing TK1 expression through m6A modification
    1
    1. scibot 03 Dec 2022
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      DOI: 10.1158/1541-7786.MCR-22-0231

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    aacrjournals.org/mcr/article/20/12/1763/711001/TFAP4-Activates-IGF2BP1-and-Promotes-Progression
  22. Sep 2022
  23. www.sciencedirect.com www.sciencedirect.com
    A natural transdifferentiation event involving mitosis is empowered by integrating signaling inputs with conserved plasticity factors
    1
    1. scibot 22 Sep 2022
      RRID:SCR_003030

      DOI: 10.1016/j.celrep.2022.111365

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    sciencedirect.com/science/article/pii/S2211124722011974
  24. Aug 2022
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of CXCL10 and CXCL11 as the candidate genes involving the development of colitis-associated colorectal cancer
    1
    1. scibot 26 Aug 2022
      RRID:SCR_003030

      DOI: 10.3389/fgene.2022.945414

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    ncbi.nlm.nih.gov/pmc/articles/PMC9393335/
  26. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
    1
    1. scibot 17 Aug 2022
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      DOI: 10.1016/j.celrep.2022.111236

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    sciencedirect.com/science/article/pii/S2211124722010531
  27. Feb 2022
  28. www.sciencedirect.com www.sciencedirect.com
    EBF1 nuclear repositioning instructs chromatin refolding to promote therapy resistance in T leukemic cells
    1
    1. scibot 23 Feb 2022
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      DOI: 10.1016/j.molcel.2022.01.015

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    sciencedirect.com/science/article/pii/S1097276522000582
  29. Jan 2022
  30. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
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    1. scibot 28 Jan 2022
      RRID:SCR_003030

      DOI: 10.1111/bph.15744

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    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15744
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhancer RNA Expression in Response to Glucocorticoid Treatment in Murine Macrophages
    1
    1. scibot 12 Jan 2022
      RRID:SCR_003030

      DOI: 10.3390/cells11010028

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    ncbi.nlm.nih.gov/pmc/articles/PMC8744892/
  32. Oct 2021
  33. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
    1
    1. scibot 20 Oct 2021
      RRID:SCR_003030

      DOI: 10.1111/bph.15625

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    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15625
  34. Aug 2021
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Axenfeld-Rieger syndrome-associated mutants of the transcription factor FOXC1 abnormally regulate NKX2-5 in model zebrafish embryos
    1
    1. scibot 17 Aug 2021
      RRID:SCR_003030

      DOI: 10.1074/jbc.RA120.013287

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    ncbi.nlm.nih.gov/pmc/articles/PMC7450120/
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Effects of intron conversion in the human CYP11B2 gene on its transcription and blood pressure regulation in transgenic mice
    1
    1. scibot 15 Aug 2021
      RRID:SCR_003030

      DOI: 10.1074/jbc.RA120.013047

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    ncbi.nlm.nih.gov/pmc/articles/PMC7415971/
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 12 Aug 2021
      RRID:SCR_003030

      DOI: 10.1016/j.celrep.2019.02.036

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    ncbi.nlm.nih.gov/pmc/articles/PMC6408623/
  38. elifesciences.org elifesciences.org
    Untitled document
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    1. scibot 01 Aug 2021
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      DOI: 10.7554/eLife.21883

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    elifesciences.org/articles/21883
  39. Jul 2021
  40. link.springer.com link.springer.com
    RASAL1 induces to downregulate the SCD1, leading to suppression of cell proliferation in colon cancer via LXRα/SREBP1c pathway
    1
    1. scibot 31 Jul 2021
      JASPAR

      DOI: 10.1186/s40659-019-0268-x

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    link.springer.com/article/10.1186/s40659-019-0268-x
  41. www.nature.com www.nature.com
    Severe head dysgenesis resulting from imbalance between anterior and posterior ontogenetic programs
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    1. scibot 31 Jul 2021
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      DOI: 10.1038/s41419-019-2040-0

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    nature.com/articles/s41419-019-2040-0
  42. link.springer.com link.springer.com
    Identification of novel cerebellar developmental transcriptional regulators with motif activity analysis
    1
    1. scibot 30 Jul 2021
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      DOI: 10.1186/s12864-019-6063-9

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    link.springer.com/article/10.1186/s12864-019-6063-9
  43. www.sciencedirect.com www.sciencedirect.com
    Enhancer Architecture and Essential Core Regulatory Circuitry of Chronic Lymphocytic Leukemia
    1
    1. scibot 28 Jul 2021
      Jaspar

      DOI: 10.1016/j.ccell.2018.11.001

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    sciencedirect.com/science/article/pii/S1535610818304835
  44. journals.sagepub.com journals.sagepub.com
    Phenotypic Screening Following Transcriptomic Deconvolution to Identify Transcription Factors Mediating Axon Growth Induced by a Kinase Inhibitor - Jeffrey A. Lowell, Nicholas O’Neill, Matt C. Danzi, Hassan Al-Ali, John L. Bixby, Vance P. Lemmon, 2021
    3
    1. scibot 11 Jul 2021
      RRID:SCR_003030

      DOI: 10.1177/24725552211026270

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    2. scibot 09 Jul 2021
      RRID:SCR_003030

      DOI: 10.1177/24725552211026270

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    3. scibot 08 Jul 2021
      RRID:SCR_003030

      DOI: 10.1177/24725552211026270

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    journals.sagepub.com/doi/full/10.1177/24725552211026270
  45. Jun 2021
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The intragenic microRNA miR199A1 in the dynamin 2 gene contributes to the pathology of X-linked centronuclear myopathy
    1
    1. scibot 29 Jun 2021
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      DOI: 10.1074/jbc.RA119.010839

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    ncbi.nlm.nih.gov/pmc/articles/PMC7324510/
  47. May 2021
  48. www.nature.com www.nature.com
    JunB is a key regulator of multiple myeloma bone marrow angiogenesis
    1
    1. scibot 22 May 2021
      RRID:SCR_003030

      DOI: 10.1038/s41375-021-01271-9

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    nature.com/articles/s41375-021-01271-9
  49. Apr 2021
  50. www.cell.com www.cell.com
    Estrogen receptor 2b is the major determinant of sex-typical mating behavior and sexual preference in medaka
    1
    1. scibot 08 Apr 2021
      RRID:SCR_003030

      DOI: 10.1016/j.cub.2021.01.089

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    cell.com/current-biology/abstract/S0960-9822(21)00154-8
  51. Mar 2021
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A previously identified apoptosis inhibitor iASPP confers resistance to chemotherapeutic drugs by suppressing senescence in cancer cells
    1
    1. scibot 21 Mar 2021
      RRID:SCR_003030

      DOI: 10.1074/jbc.RA119.011411

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    ncbi.nlm.nih.gov/pmc/articles/PMC7086043/
  53. Feb 2021
  54. www.sciencedirect.com www.sciencedirect.com
    The glucocorticoid receptor recruits the COMPASS complex to regulate inflammatory transcription at macrophage enhancers
    1
    1. scibot 28 Feb 2021
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      DOI: 10.1016/j.celrep.2021.108742

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    sciencedirect.com/science/article/pii/S2211124721000553
  55. Jan 2021
  56. www.embopress.org www.embopress.org
    Steroid‐dependent switch of OvoL/Shavenbaby controls self‐renewal versus differentiation of intestinal stem cells
    1
    1. scibot 07 Jan 2021
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      DOI: 10.15252/embj.2019104347

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    embopress.org/doi/full/10.15252/embj.2019104347
  57. Dec 2020
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes
    1
    1. scibot 07 Dec 2020
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      DOI: 10.7554/eLife.62522

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    ncbi.nlm.nih.gov/pmc/articles/PMC7688309/
  59. Sep 2020
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    GLI transcriptional repression regulates tissue-specific enhancer activity in response to Hedgehog signaling
    1
    1. scibot 11 Sep 2020
      RRID:SCR_003030

      DOI: 10.7554/eLife.50670

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    ncbi.nlm.nih.gov/pmc/articles/PMC6986877/
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ATR expands embryonic stem cell fate potential in response to replication stress
    1
    1. scibot 11 Sep 2020
      RRID:SCR_003030

      DOI: 10.7554/eLife.54756

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    ncbi.nlm.nih.gov/pmc/articles/PMC7067586/
  62. www.sciencedirect.com www.sciencedirect.com
    Genomic Rewiring of SOX2 Chromatin Interaction Network during Differentiation of ESCs to Postmitotic Neurons
    1
    1. scibot 06 Sep 2020
      RRID:SCR_003030

      DOI: 10.1016/j.cels.2020.05.003

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    sciencedirect.com/science/article/pii/S2405471220301885
  63. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
    1
    1. scibot 05 Sep 2020
      RRID:SCR_003030

      DOI: 10.1111/bph.15225

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  64. Jan 2020
  65. www.sciencedirect.com www.sciencedirect.com
    Single-Molecule Nanoscopy Elucidates RNA Polymerase II Transcription at Single Genes in Live Cells
    1
    1. scibot 13 Jan 2020
      RRID:SCR_003030

      DOI: 10.1016/j.cell.2019.05.029

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    sciencedirect.com/science/article/pii/S0092867419305574
  66. www.sciencedirect.com www.sciencedirect.com
    A Pan-cancer Transcriptome Analysis Reveals Pervasive Regulation through Alternative Promoters
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    1. scibot 13 Jan 2020
      RRID:SCR_003030

      DOI: 10.1016/j.cell.2019.08.018

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  67. elifesciences.org elifesciences.org
    Neuropeptide B mediates female sexual receptivity in medaka fish, acting in a female-specific but reversible manner
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    1. scibot 13 Jan 2020
      RRID:SCR_003030

      DOI: 10.7554/eLife.39495

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  68. www.sciencedirect.com www.sciencedirect.com
    Quantification of Differential Transcription Factor Activity and Multiomics-Based Classification into Activators and Repressors: diffTF
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    1. scibot 13 Jan 2020
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      DOI: 10.1016/j.celrep.2019.10.106

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  69. www.sciencedirect.com www.sciencedirect.com
    Metabolic Control of Astrocyte Pathogenic Activity via cPLA2-MAVS
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      DOI: 10.1016/j.cell.2019.11.016

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  70. www.sciencedirect.com www.sciencedirect.com
    A Single-Cell Transcriptomic Atlas of Human Neocortical Development during Mid-gestation
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      DOI: 10.1016/j.neuron.2019.06.011

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  71. www.sciencedirect.com www.sciencedirect.com
    Untitled document
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      DOI: 10.1016/j.celrep.2019.02.036

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  72. www.sciencedirect.com www.sciencedirect.com
    Oncogenic Notch Promotes Long-Range Regulatory Interactions within Hyperconnected 3D Cliques
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      DOI: 10.1016/j.molcel.2019.01.006

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  73. www.sciencedirect.com www.sciencedirect.com
    LRH1-driven transcription factor circuitry for hepatocyte identity: Super-enhancer cistromic analysis
    1
    1. scibot 13 Jan 2020
      RRID:SCR_003030

      DOI: 10.1016/j.ebiom.2018.12.056

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    sciencedirect.com/science/article/pii/S2352396418306339
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Arid3a regulates nephric tubule regeneration via evolutionarily conserved regeneration signal-response enhancers
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    1. scibot 12 Jan 2020
      RRID:SCR_003030

      DOI: 10.7554/eLife.43186

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  75. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Differential effects on neurodevelopment of FTO variants in obesity and bipolar disorder suggested by in silico prediction of functional impact: An analysis in Mexican population
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      DOI: 10.1002/brb3.1249

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  76. Nov 2018
  77. www.sciencedirect.com www.sciencedirect.com
    Correlated Evolution of Two Copulatory Organs via a Single cis-Regulatory Nucleotide Change
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      Jaspar

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    sciencedirect.com/science/article/pii/S096098221831131X
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FoxP2 isoforms delineate spatiotemporal transcriptional networks for vocal learning in the zebra finch
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      JASPAR

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    ncbi.nlm.nih.gov/pmc/articles/PMC5826274/
  79. www.sciencedirect.com www.sciencedirect.com
    Long-Range Signaling Activation and Local Inhibition Separate the Mesoderm and Endoderm Lineages
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    1. scibot 05 Nov 2018
      JASPAR

      Curator: @evieth

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  80. www.sciencedirect.com www.sciencedirect.com
    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
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    sciencedirect.com/science/article/pii/S0092867417314940
  81. Nov 2017
  82. elifesciences.org elifesciences.org
    Simultaneous measurement of chromatin accessibility, DNA methylation, and nucleosome phasing in single cells
    1
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      JASPAR

      Curator: @chewbeccax

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    elifesciences.org/articles/23203
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Layer-specific chromatin accessibility landscapes reveal regulatory networks in adult mouse visual cortex
    1
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      SCR_003030

      Curator: @kaitlinsung

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    ncbi.nlm.nih.gov/pmc/articles/PMC5325622/
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inference of gene regulation functions from dynamic transcriptome data
    1
    1. scibot 08 Nov 2017
      SCR_003030

      Curator: @gabimpine

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    ncbi.nlm.nih.gov/pmc/articles/PMC5072840/