46 Matching Annotations
  1. Jul 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    gNOMO2: a comprehensive and modular pipeline for integrated multi-omics analyses of microbiomes
    1
    1. scibot 17 Jul 2024
      RRID:SCR_003411

      DOI: 10.1093/gigascience/giae038

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    ncbi.nlm.nih.gov/pmc/articles/PMC11240238/
  3. Mar 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Surface and global proteome analyses identify ENPP1 and other surface proteins as actionable immunotherapeutic targets in Ewing sarcoma
    1
    1. scibot 06 Mar 2024
      RRID:SCR_003411

      DOI: 10.1158/1078-0432.CCR-23-2187

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    ncbi.nlm.nih.gov/pmc/articles/PMC10905525/
  5. elifesciences.org elifesciences.org
    Proteomic analysis shows decreased type I fibers and ectopic fat accumulation in skeletal muscle from women with PCOS
    2
    1. scibot 01 Mar 2024
      RRID:SCR_003411

      DOI: 10.7554/eLife.87592

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    2. scibot 01 Mar 2024
      RRID:SCR_003411SCR_003411

      DOI: 10.7554/eLife.87592

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    elifesciences.org/articles/87592
  6. Feb 2024
  7. 52.53.155.43 52.53.155.43
    ccr-23-2187-html.html
    2
    1. scibot 29 Feb 2024
      RRID:SCR_003411

      DOI: 10.1158/1078-0432.ccr-23-2187

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    2. scibot 29 Feb 2024
      RRID:SCR_003411

      DOI: 10.1158/1078-0432.ccr-23-2187

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    52.53.155.43/2e0368f07290c0b8458d20828eaac0ef93ad5b63/delete -html.html
  8. www.nature.com www.nature.com
    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
    1
    1. scibot 08 Feb 2024
      RRID:SCR_003411

      DOI: 10.1038/s41467-024-45067-8

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    nature.com/articles/s41467-024-45067-8
  9. Jan 2024
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Riboproteome remodelling during quiescence exit in Saccharomyces cerevisiae
    1
    1. scibot 20 Jan 2024
      RRID:SCR_003411

      DOI: 10.1016/j.isci.2023.108727

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    ncbi.nlm.nih.gov/pmc/articles/PMC10792236/
  11. Dec 2023
  12. www.sciencedirect.com www.sciencedirect.com
    A proteomic insight reveals the role of food-associated Lactiplantibacillus plantarum C9O4 in reverting intestinal inflammation
    1
    1. scibot 02 Dec 2023
      RRID:SCR_003411

      DOI: 10.1016/j.isci.2023.108481

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    sciencedirect.com/science/article/pii/S2589004223025580
  13. 52.53.155.43 52.53.155.43
    ccr-23-2187-html.html
    1
    1. scibot 01 Dec 2023
      RRID:SCR_003411

      DOI: 10.1158/1078-0432.ccr-23-2187

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    52.53.155.43/2e0368f07290c0b8458d20828eaac0ef93ad5b63/delete -html.html
  14. Nov 2023
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Variability analysis of LC-MS experimental factors and their impact on machine learning
    1
    1. scibot 26 Nov 2023
      RRID:SCR_003411

      DOI: 10.1093/gigascience/giad096

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10659119/
  16. Oct 2023
  17. link.springer.com link.springer.com
    Indacaterol inhibits collective cell migration and IGDQ-mediated single cell migration in metastatic breast cancer MDA-MB-231 cells
    1
    1. scibot 31 Oct 2023
      RRID:SCR_003411

      DOI: 10.1186/s12964-023-01340-9

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    link.springer.com/article/10.1186/s12964-023-01340-9
  18. Jun 2023
  19. www.sciencedirect.com www.sciencedirect.com
    Phosphoproteomics guides effective low-dose drug combinations against pancreatic ductal adenocarcinoma
    1
    1. scibot 03 Jun 2023
      RRID:SCR_003411

      DOI: 10.1016/j.celrep.2023.112581

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    sciencedirect.com/science/article/pii/S2211124723005922
  20. May 2023
  21. www.medrxiv.org www.medrxiv.org
    Type I fiber decrease and ectopic fat accumulation in skeletal muscle from women with PCOS
    1
    1. scibot 04 May 2023
      RRID:SCR_003411

      DOI: 10.1101/2023.03.08.23286896

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    medrxiv.org/content/10.1101/2023.03.08.23286896v2
  22. Feb 2023
  23. www.sciencedirect.com www.sciencedirect.com
    RNA-DNA hybrids prevent resection at dysfunctional telomeres
    1
    1. scibot 02 Feb 2023
      RRID:SCR_003411

      DOI: 10.1016/j.celrep.2023.112077

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    sciencedirect.com/science/article/pii/S2211124723000888
  24. Jan 2023
  25. www.sciencedirect.com www.sciencedirect.com
    Hemisynthetic alkaloids derived from trilobine are antimalarials with sustained activity in multidrug resistant Plasmodium falciparum
    1
    1. scibot 28 Jan 2023
      RRID:SCR_003411

      DOI: 10.1016/j.isci.2023.105940

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    sciencedirect.com/science/article/pii/S2589004223000172
  26. Dec 2022
  27. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Blood plasma protein profiles of neuropsychiatric symptoms and related cognitive decline in older people
    1
    1. scibot 02 Dec 2022
      RRID:SCR_003411

      DOI: 10.1111/jnc.15715

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    onlinelibrary.wiley.com/doi/10.1111/jnc.15715
  28. Nov 2022
  29. academic.oup.com academic.oup.com
    GIP affects hepatic fat and brown adipose tissue thermogenesis, but not white adipose tissue transcriptome in T1D
    1
    1. scibot 22 Nov 2022
      RRID:SCR_003411

      DOI: 10.1210/clinem/dgac542

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    academic.oup.com/jcem/advance-article/doi/10.1210/clinem/dgac542/6701885
  30. www.sciencedirect.com www.sciencedirect.com
    Global profiling of the proteomic changes associated with the post-testicular maturation of mouse spermatozoa
    1
    1. scibot 16 Nov 2022
      RRID:SCR_003411

      DOI: 10.1016/j.celrep.2022.111655

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    sciencedirect.com/science/article/pii/S2211124722015261
  31. Sep 2022
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    NCOA4-mediated ferritinophagy is a pancreatic cancer dependency via maintenance of iron bioavailability for iron-sulfur cluster proteins
    1
    1. scibot 10 Sep 2022
      RRID:SCR_003411

      DOI: 10.1158/2159-8290.CD-22-0043

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    ncbi.nlm.nih.gov/pmc/articles/PMC9437572/
  33. Jun 2022
  34. aacrjournals.org aacrjournals.org
    Phosphorylation of SHP2 at Tyr62 enables acquired resistance to SHP2 allosteric inhibitors in FLT3-ITD-driven AML
    1
    1. scibot 18 Jun 2022
      RRID:SCR_003411

      DOI: 10.1158/0008-5472.CAN-21-0548

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    aacrjournals.org/cancerres/article/82/11/2141/699099/Phosphorylation-of-SHP2-at-Tyr62-Enables-Acquired
  35. Apr 2022
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomic-Based Machine Learning Analysis Reveals PYGB as a Novel Immunohistochemical Biomarker to Distinguish Inverted Urothelial Papilloma From Low-Grade Papillary Urothelial Carcinoma With Inverted Growth
    1
    1. scibot 09 Apr 2022
      SCR_003411

      DOI: 10.3389/fonc.2022.841398

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    ncbi.nlm.nih.gov/pmc/articles/PMC8987228/
  37. Mar 2022
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Placental uptake and metabolism of 25(OH)vitamin D determine its activity within the fetoplacental unit
    1
    1. scibot 11 Mar 2022
      RRID:SCR_003411

      DOI: 10.7554/eLife.71094

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    ncbi.nlm.nih.gov/pmc/articles/PMC8903835/
  39. www.sciencedirect.com www.sciencedirect.com
    The proteomic profile of the human myotendinous junction
    1
    1. scibot 02 Mar 2022
      RRID:SCR_003411

      DOI: 10.1016/j.isci.2022.103836

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    sciencedirect.com/science/article/pii/S2589004222001067
  40. Dec 2021
  41. www.sciencedirect.com www.sciencedirect.com
    Quantifying phosphorylation dynamics in primary neuronal cultures using LC-MS/MS
    1
    1. scibot 24 Dec 2021
      RRID:SCR_003411

      DOI: 10.1016/j.xpro.2021.101063

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    sciencedirect.com/science/article/pii/S2666166721007693
  42. Nov 2021
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    CaMKK2 is inactivated by cAMP-PKA signaling and 14-3-3 adaptor proteins
    1
    1. scibot 30 Nov 2021
      RRID:SCR_003411

      DOI: 10.1074/jbc.RA120.013756

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    ncbi.nlm.nih.gov/pmc/articles/PMC7705300/
  44. www.sciencedirect.com www.sciencedirect.com
    Statins affect cancer cell plasticity with distinct consequences for tumor progression and metastasis
    1
    1. scibot 24 Nov 2021
      RRID:SCR_003411

      DOI: 10.1016/j.celrep.2021.110056

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    sciencedirect.com/science/article/pii/S2211124721015424
  45. www.sciencedirect.com www.sciencedirect.com
    A novel Cereblon E3 ligase modulator with antitumor activity in gastrointestinal cancer
    1
    1. scibot 23 Nov 2021
      RRID:SCR_003411

      DOI: 10.1016/j.bioorg.2021.105505

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    sciencedirect.com/science/article/pii/S004520682100883X
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy
    1
    1. scibot 05 Nov 2021
      RRID:SCR_003411

      DOI: 10.7554/eLife.65759

      Resource: Proteomics Identifications (PRIDE) (RRID:SCR_003411)

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    ncbi.nlm.nih.gov/pmc/articles/PMC8550759/
  47. Oct 2021
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Neuronal ribosomes exhibit dynamic and context-dependent exchange of ribosomal proteins
    1
    1. scibot 28 Oct 2021
      RRID:SCR_003411

      DOI: 10.1038/s41467-021-26365-x

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    ncbi.nlm.nih.gov/pmc/articles/PMC8531293/
  49. Aug 2021
  50. www.sciencedirect.com www.sciencedirect.com
    Dynamic bi-directional phosphorylation events associated with the reciprocal regulation of synapses during homeostatic up- and down-scaling
    1
    1. scibot 25 Aug 2021
      RRID:SCR_003411

      DOI: 10.1016/j.celrep.2021.109583

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    sciencedirect.com/science/article/pii/S2211124721010172
  51. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Untitled document
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    1. scibot 05 Aug 2021
      RRID:SCR_003411

      DOI: 10.1002/cne.24551

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    onlinelibrary.wiley.com/doi/full/10.1002/cne.24551
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DYRK1A Overexpression Alters Cognition and Neural-Related Proteomic Pathways in the Hippocampus That Are Rescued by Green Tea Extract and/or Environmental Enrichment
    1
    1. scibot 01 Aug 2021
      RRID:SCR_003411

      DOI: 10.3389/fnmol.2019.00272

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      Curator: @evieth

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    ncbi.nlm.nih.gov/pmc/articles/PMC6873902/
  53. Jul 2021
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Specialization of the Drosophila nuclear export family protein Nxf3 for piRNA precursor export
    1
    1. scibot 30 Jul 2021
      PRIDE

      DOI: 10.1101/gad.328690.119

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    ncbi.nlm.nih.gov/pmc/articles/PMC6719614/
  55. www.embopress.org www.embopress.org
    VAP‐SCRN1 interaction regulates dynamic endoplasmic reticulum remodeling and presynaptic function
    1
    1. scibot 29 Jul 2021
      Pride

      DOI: 10.15252/embj.2018101345

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    embopress.org/doi/abs/10.15252/embj.2018101345
  56. May 2021
  57. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Diagnostic Biomarkers from Proteomic Characterization of Cerebrospinal Fluid in Patients with Brain Malignancies
    1
    1. scibot 10 May 2021
      RRID:SCR_003411

      DOI: 10.1111/jnc.15350

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    onlinelibrary.wiley.com/doi/10.1111/jnc.15350
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Formation of polarized contractile interfaces by self-organized Toll-8/Cirl GPCR asymmetry
    1
    1. scibot 01 May 2021
      RRID:SCR_003411

      DOI: 10.1016/j.devcel.2021.03.030

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    ncbi.nlm.nih.gov/pmc/articles/PMC8207821/
  59. Feb 2021
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    B-Cell-Specific Myd88 L252P Expression Causes a Premalignant Gammopathy Resembling IgM MGUS
    1
    1. scibot 27 Feb 2021
      RRID:SCR_003411

      DOI: 10.3389/fimmu.2020.602868

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    ncbi.nlm.nih.gov/pmc/articles/PMC7747680/
  61. www.cell.com www.cell.com
    Inverse Data-Driven Modeling and Multiomics Analysis Reveals Phgdh as a Metabolic Checkpoint of Macrophage Polarization and Proliferation
    1
    1. scibot 24 Feb 2021
      RRID:SCR_003411

      DOI: 10.1016/j.celrep.2020.01.011

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    cell.com/cell-reports/abstract/S2211-1247(20)30020-6
  62. Oct 2020
  63. www.nature.com www.nature.com
    Re-establishment of the epigenetic state and rescue of kinome deregulation in Ts65Dn mice upon treatment with green tea extract and environmental enrichment
    1
    1. scibot 17 Oct 2020
      RRID:SCR_003411

      DOI: 10.1038/s41598-020-72625-z

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    nature.com/articles/s41598-020-72625-z
  64. Sep 2020
  65. www.sciencedirect.com www.sciencedirect.com
    A Bartonella Effector Acts as Signaling Hub for Intrinsic STAT3 Activation to Trigger Anti-inflammatory Responses
    1
    1. scibot 23 Sep 2020
      RRID:SCR_003411

      DOI: 10.1016/j.chom.2020.01.015

      Resource: PRIDE (RRID:SCR_003411)

      Curator: @ethanbadger

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      RRID:SCR_003411 RRIDCUR:Validated
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    sciencedirect.com/science/article/pii/S1931312820300548
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteome dynamics during homeostatic scaling in cultured neurons
    1
    1. scibot 14 Sep 2020
      RRID:SCR_003411

      DOI: 10.7554/eLife.52939

      Resource: PRIDE (RRID:SCR_003411)

      Curator: @evieth

      SciCrunch record: RRID:SCR_003411

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      RRIDCUR:Validated RRID:SCR_003411
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    ncbi.nlm.nih.gov/pmc/articles/PMC7117909/
  67. www.cell.com www.cell.com
    Inverse Data-Driven Modeling and Multiomics Analysis Reveals Phgdh as a Metabolic Checkpoint of Macrophage Polarization and Proliferation
    1
    1. scibot 12 Sep 2020
      RRID:SCR_003411

      DOI: 10.1016/j.celrep.2020.01.011

      Resource: PRIDE (RRID:SCR_003411)

      Curator: @ethanbadger

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      RRIDCUR:Validated RRID:SCR_003411
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    cell.com/cell-reports/abstract/S2211-1247(20)30020-6
  68. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Cerebrospinal fluid proteomic profiling in nusinersen‐treated patients with spinal muscular atrophy
    1
    1. scibot 08 Sep 2020
      RRID:SCR_003411

      DOI: 10.1111/jnc.14953

      Resource: PRIDE (RRID:SCR_003411)

      Curator: @ethanbadger

      SciCrunch record: RRID:SCR_003411

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      RRID:SCR_003411 RRIDCUR:Validated
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    onlinelibrary.wiley.com/doi/10.1111/jnc.14953
  69. Nov 2018
  70. www.sciencedirect.com www.sciencedirect.com
    Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation
    1
    1. scibot 05 Nov 2018
      PRIDE

      Curator: @evieth

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      (PRIDE, RRID:SCR_003411)

      SciCrunch record: RRID:SCR_003411

      Alternate resolvers: SciCrunch xml N2T identifiers.org

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      RRID:SCR_003411 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S2211124718312014
  71. Nov 2017
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Extensive cargo identification reveals distinct biological roles of the 12 importin pathways
    1
    1. scibot 08 Nov 2017
      SCR_003411

      Curator: @Zeljana_Babic

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      (PRIDE, RRID:SCR_003411)

      SciCrunch record: RRID:SCR_003411

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      RRID:SCR_003411 RRIDCUR:Validated
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    ncbi.nlm.nih.gov/pmc/articles/PMC5305215/