121 Matching Annotations
  1. Aug 2025
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Telomere-to-telomere African wild rice (Oryza longistaminata) reference genome reveals segmental and structural variation
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12360840/
  3. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Whole genome sequencing and assembly of the house sparrow, Passer domesticus
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12308067/
  4. May 2025
  5. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-scale assemblies of three Ormosia species: repetitive sequences distribution and structural rearrangement
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12083454/
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The haplotype-resolved T2T genome for Bauhinia × blakeana sheds light on the genetic basis of flower heterosis
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12012898/
  7. Apr 2025
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genome assembly and annotation of Acropora pulchra from Mo’orea French Polynesia
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    pmc.ncbi.nlm.nih.gov/articles/PMC11985253/
  9. Mar 2025
  10. www.nature.com www.nature.com
    Sporophyte-directed gametogenesis in Arabidopsis
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    nature.com/articles/s41477-025-01932-y
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Lineage-Specific Class-A GPCR Dynamics Reflect Diverse Chemosensory Adaptations in Lophotrochozoa
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    pmc.ncbi.nlm.nih.gov/articles/PMC11886862/
  12. Feb 2025
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11843098/
  14. aacrjournals.org aacrjournals.org
    SPARC stabilizes ApoE to induce cholesterol-dependent invasion and sorafenib resistance in hepatocellular carcinoma
    1
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    aacrjournals.org/cancerres/article/84/11/1872/745508/SPARC-Stabilizes-ApoE-to-Induce-Cholesterol
  15. Jan 2025
  16. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11659978/
  17. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Differences in gene expression between high and low tolerance rainbow trout (Oncorhynchus mykiss) to acute thermal stress
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11709236/
  18. Dec 2024
  19. 52.53.155.43 52.53.155.43
    PDF-html.html
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    52.53.155.43/7ccb4c5104f3067c66d81bce354f2a4cf02941b2/PDF-html.html
  20. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The chromosome-level genome assembly of an endangered herb Bergenia scopulosa provides insights into local adaptation and genomic vulnerability under climate change
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11604060/
  21. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Construction and analysis of telomere-to-telomere genomes for 2 sweet oranges: Longhuihong and Newhall (Citrus sinensis)
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11590112/
  22. www.sciencedirect.com www.sciencedirect.com
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
    1
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    sciencedirect.com/science/article/pii/S0092867424012728
  23. Oct 2024
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The RNA helicase HrpA rescues collided ribosomes in E. coli
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11419001/
  25. Aug 2024
  26. www.sciencedirect.com www.sciencedirect.com
    Functional genomic analysis of genes important for Candida albicans fitness in diverse environmental conditions
    1
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    sciencedirect.com/science/article/pii/S2211124724009409
  27. Jul 2024
  28. www.biorxiv.org www.biorxiv.org
    Evolutionary Dynamics of Lineage-Specific Class-A GPCR Subsets Reveal Widespread Chemosensory Roles and Adaptations in Lophotrochozoa
    1
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    biorxiv.org/content/10.1101/2024.07.14.603414v1
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A ghost moth olfactory prototype of the lepidopteran sex communication
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11258902/
  30. May 2024
  31. 52.53.155.43 52.53.155.43
    can-23-2889-html.html
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    52.53.155.43/a8919844f40dcc1fdf436a1665152c247ec22168/can-23-2889-html.html
  32. 52.53.155.43 52.53.155.43
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
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    52.53.155.43/cd1f9c7be80d56e211920ba04afd056c82fa391f/2024.02.19.579948.full-html.html
  33. Mar 2024
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  35. Nov 2023
  36. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Establishing an early indicator for data sharing and reuse
    1
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    onlinelibrary.wiley.com/doi/10.1002/leap.1586
  37. Oct 2023
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Biosynthetic gene profiling and genomic potential of the novel photosynthetic marine bacterium Roseibaca domitiana
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10584327/
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level assembly supports genome-wide investigation of the DMRT gene family in the golden mussel (Limnoperna fortunei)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541798/
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  41. Sep 2023
  42. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
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    sciencedirect.com/science/article/pii/S2211124723011221
  43. link.springer.com link.springer.com
    Maize heat shock proteins—prospection, validation, categorization and in silico analysis of the different ZmHSP families
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    link.springer.com/article/10.1007/s44154-023-00104-2
  44. Jul 2023
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structural insights into pink-eyed dilution protein (Oca2)
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    ncbi.nlm.nih.gov/pmc/articles/PMC10372470/
  46. www.sciencedirect.com www.sciencedirect.com
    A conserved pressure-driven mechanism for regulating cytosolic osmolarity
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    sciencedirect.com/science/article/pii/S0960982223008461
  47. May 2023
  48. www.sciencedirect.com www.sciencedirect.com
    Bacterial NLR-related proteins protect against phage
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    sciencedirect.com/science/article/pii/S0092867423004117
  49. link.springer.com link.springer.com
    Bioinformatics and gene expression analysis of the legume F-box/WD40 proteins in NaCl and high temperature stress
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    link.springer.com/article/10.1007/s10722-023-01592-x
  50. Apr 2023
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Two salivary proteins Sm10 and SmC002 from grain aphid Sitobion miscanthi modulate wheat defense and enhance aphid performance
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10086322/
  52. Mar 2023
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the deep-sea coral Lophelia pertusa
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10022433/
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first Antechinus reference genome provides a resource for investigating the genetic basis of semelparity and age-related neuropathologies
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631953/
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  56. Feb 2023
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  58. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
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    sciencedirect.com/science/article/pii/S0888754323000265
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome and the identification of sex chromosomes in Uloborus diversus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9912274/
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An updated version of the Madagascar periwinkle genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9902796/
  61. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Macrophage migration inhibitory factor MtMIF3 prevents the premature aging of Medicago truncatula nodules
    1
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    onlinelibrary.wiley.com/doi/10.1111/pce.14515
  62. Jan 2023
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic study and lipidomic bioassay of Leeuwenhoekiella parthenopeia: A novel rare biosphere marine bacterium that inhibits tumor cell viability
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9859067/
  64. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome wide analysis of Tryptophan Aminotransferase Related gene family, and their relationship with related agronomic traits in Brassica napus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9811149/
  66. Nov 2022
  67. academic.oup.com academic.oup.com
    High-quality genome assembles from key Hawaiian coral species
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac098/6815755
  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Antibacterial T6SS effectors with a VRR-Nuc domain are structure-specific nucleases
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    ncbi.nlm.nih.gov/pmc/articles/PMC9635880/
  69. Oct 2022
  70. 52.53.155.43 52.53.155.43
    1-s2.0-S2095311922001058-main-html.html
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    52.53.155.43/aaa461132ab556a87a26a7e4f6affb8d35b313ad/1-s2.0-S2095311922001058-main-html.html
  71. Jul 2022
  72. academic.oup.com academic.oup.com
    Chromosome-Level Genome Assembly of the Butter Clam Saxidomus purpuratus
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    academic.oup.com/gbe/article/14/7/evac106/6650251
  73. academic.oup.com academic.oup.com
    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac059/6619297
  74. Jun 2022
  75. academic.oup.com academic.oup.com
    Genomes and demographic histories of the endangered Bretschneidera sinensis (Akaniaceae)
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac050/6608505
  76. www.sciencedirect.com www.sciencedirect.com
    Anti-CRISPR prediction using deep learning reveals an inhibitor of Cas13b nucleases
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    sciencedirect.com/science/article/pii/S1097276522004373
  77. May 2022
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9055855/
  79. Apr 2022
  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality assembly reveals genomic characteristics, phylogenetic status, and causal genes for leucism plumage of Indian peafowl
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8985102/
  81. Mar 2022
  82. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
    1
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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC6030905/
  83. Jan 2022
  84. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the shuttles hoppfish, Periophthalmus modestus
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab089/6505119
  85. Dec 2021
  86. www.mdpi.com www.mdpi.com
    Chromosomal-Level Assembly of Antarctic Scaly Rockcod, Trematomus loennbergii Genome Using Long-Read Sequencing and Chromosome Conformation Capture (Hi-C) Technologies
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    mdpi.com/1424-2818/13/12/668
  87. Oct 2021
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly for the eastern fence lizard (Sceloporus undulatus), a reptile model for physiological and evolutionary ecology
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8486681/
  89. Aug 2021
  90. elifesciences.org elifesciences.org
    Untitled document
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    elifesciences.org/articles/16761
  91. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/7/7/giy068/5040257
  92. f1000research.com f1000research.com
    Untitled document
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    f1000research.com/articles/7-261
  93. f1000research.com f1000research.com
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    f1000research.com/articles/6-275/v1
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6279123/
  95. Jul 2021
  96. elifesciences.org elifesciences.org
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    elifesciences.org/articles/19993
  97. elifesciences.org elifesciences.org
    Formin-2 drives polymerisation of actin filaments enabling segregation of apicoplasts and cytokinesis in Plasmodium falciparum
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    elifesciences.org/articles/49030
  98. f1000research.com f1000research.com
    Untitled document
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    f1000research.com/articles/7-261/v1
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale genome assembly of kiwifruit Actinidia eriantha with single-molecule sequencing and chromatin interaction mapping
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    ncbi.nlm.nih.gov/pmc/articles/PMC6446220/
  100. academic.oup.com academic.oup.com
    Re-assembly, quality evaluation, and annotation of 678 microbial eukaryotic reference transcriptomes
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    academic.oup.com/gigascience/article/8/4/giy158/5241890
  101. febs.onlinelibrary.wiley.com febs.onlinelibrary.wiley.com
    Domain structure of HelD, an interaction partner of Bacillus subtilis RNA polymerase
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    febs.onlinelibrary.wiley.com/doi/full/10.1002/1873-3468.13385
  102. academic.oup.com academic.oup.com
    A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways
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    academic.oup.com/gigascience/article/8/3/giz005/5304368
  103. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC5751067/
  104. onlinelibrary.wiley.com onlinelibrary.wiley.com
    De Novo Assembly of a Chromosome‐Level Reference Genome of Red Spotted Grouper (Epinephelus akaara) Using Nanopore Sequencing and Hi‐C
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    onlinelibrary.wiley.com/doi/10.1111/1755-0998.13064
  105. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Discovery of new protein families and functions: new challenges in functional metagenomics for biotechnologies and microbial ecology
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    ncbi.nlm.nih.gov/pmc/articles/PMC4456863/
  106. www.authorea.com www.authorea.com
    Chromosome-level genome assembly of the sweet potato weevil, Cylas formicarius (Fabricius) (Coleoptera: Brentidae) and functional characteristics of CforOBP4-6
    1
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    authorea.com/users/421871/articles/527720-chromosome-level-genome-assembly-of-the-sweet-potato-weevil-cylas-formicarius-fabricius-coleoptera-brentidae-and-functional-characteristics-of-cforobp4-6
  107. Feb 2021
  108. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quantitative Trait Locus Mapping and Identification of Candidate Genes Controlling Flowering Time in Brassica napus L.
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    ncbi.nlm.nih.gov/pmc/articles/PMC7886670/
  109. www.mdpi.com www.mdpi.com
    The Genome Assembly and Annotation of the Southern Elephant Seal Mirounga leonina
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    mdpi.com/2073-4425/11/2/160
  110. Jan 2021
  111. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    In silico prediction of structure and function for a large family of transmembrane proteins that includes human Tmem41b
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    ncbi.nlm.nih.gov/pmc/articles/PMC7818093/
  112. Dec 2020
  113. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Donkey genomes provide new insights into domestication and selection for coat color
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    ncbi.nlm.nih.gov/pmc/articles/PMC7723042/
  114. Nov 2020
  115. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Predicted structural differences of four fertility‐related Y‐chromosome proteins in Macaca mulatta, M. fascicularis, and their Indochinese hybrids
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    onlinelibrary.wiley.com/doi/10.1002/prot.26021
  116. Oct 2020
  117. academic.oup.com academic.oup.com
    Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome
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    academic.oup.com/gigascience/article/9/10/giaa114/5938995
  118. Sep 2020
  119. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cell-type diversity and regionalized gene expression in the planarian intestine
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    ncbi.nlm.nih.gov/pmc/articles/PMC7117911/
  120. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Construction of a chromosome-scale long-read reference genome assembly for potato
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    pubmed.ncbi.nlm.nih.gov/32964225/
  121. academic.oup.com academic.oup.com
    Generation of a chromosome-scale genome assembly of the insect-repellent terpenoid-producing Lamiaceae species, Callicarpa americana
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    academic.oup.com/gigascience/article/9/9/giaa093/5902285
  122. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft Genome of the Asian Buffalo Leech Hirudinaria manillensis
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  123. www.microbiologyresearch.org www.microbiologyresearch.org
    Mycoparasitism illuminated by genome and transcriptome sequencing of Coniothyrium minitans, an important biocontrol fungus of the plant pathogen Sclerotinia sclerotiorum
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    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
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  125. onlinelibrary.wiley.com onlinelibrary.wiley.com
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  126. journals.sagepub.com journals.sagepub.com
    Lactosyl-sepharose binding proteins from pancreatic cancer cells show differential expression in primary and metastatic organs - Micah N Sagini, Karel D Klika, Agnes Hotz-Wagenblatt, Michael Zepp, Martin R Berger,
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  127. Jan 2020
  128. elifesciences.org elifesciences.org
    The role of structural pleiotropy and regulatory evolution in the retention of heteromers of paralogs
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    An integrated chromosome-scale genome assembly of the Masai giraffe (Giraffa camelopardalis tippelskirchi)
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    De novo assembly and characterization of the transcriptome of the northern mauxia shrimp Acetes chinensis
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    De novo genome assembly of the white-spotted flower chafer (Protaetia brevitarsis)
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  137. Nov 2018
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    Innovative assembly strategy contributes to understanding the evolution and conservation genetics of the endangered Solenodon paradoxus from the island of Hispaniola
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    Improving amphibian genomic resources: a multitissue reference transcriptome of an iconic invader.
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    Genome sequence of the small brown planthopper, Laodelphax striatellus.
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  150. Nov 2017
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  153. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative Transcriptome Analysis Reveals Critical Function of Sucrose Metabolism Related-Enzymes in Starch Accumulation in the Storage Root of Sweet Potato
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    Sequencing, de novo assembling, and annotating the genome of the endangered Chinese crocodile lizard Shinisaurus crocodilurus
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