232 Matching Annotations
  1. Last 7 days
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated re-analysis of transcriptomic and proteomic datasets reveals potential mechanisms for Zika viral-based oncolytic therapy in neuroblastoma
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    1. scibot 03 Jul 2024
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      DOI: 10.12688/f1000research.132627.3

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    ncbi.nlm.nih.gov/pmc/articles/PMC11187533/
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    The clock gene BHLHE40 and atypical CCNG2 control androgen-induced cellular senescence as a novel tumor suppressive pathway in prostate cancer
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    1. scibot 27 Jun 2024
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    ncbi.nlm.nih.gov/pmc/articles/PMC11188219/
  4. Jun 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Early detection and diagnosis of cancer with interpretable machine learning to uncover cancer-specific DNA methylation patterns
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    1. scibot 22 Jun 2024
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      DOI: 10.1093/biomethods/bpae028

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    2. scibot 22 Jun 2024
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      DOI: 10.1093/biomethods/bpae028

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    ncbi.nlm.nih.gov/pmc/articles/PMC11186673/
  6. link.springer.com link.springer.com
    Potential molecular patterns for tuberculosis susceptibility in diabetic patients with poor glycaemic control: a pilot study
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    1. scibot 06 Jun 2024
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      DOI: 10.1007/s00438-024-02139-0

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    link.springer.com/article/10.1007/s00438-024-02139-0
  7. May 2024
  8. 52.53.155.43 52.53.155.43
    Clinical features and Multiomics Profiles Indicate Coagulation and Platelet Dysfunction in COVID-19 Viral Sepsis
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    1. scibot 30 May 2024
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      DOI: 10.1016/j.isci.2024.110110

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    2. scibot 30 May 2024
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      DOI: 10.1016/j.isci.2024.110110

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    52.53.155.43/66a8cf9737b06a9c520ac2f4939f1e03cc5bf359/1-s2.0-S258900422401335X-main-html.html
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    Contrasting consequences of podocyte IGF1R inhibition
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    1. scibot 09 May 2024
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      DOI: 10.1016/j.isci.2024.109749

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    ncbi.nlm.nih.gov/pmc/articles/PMC11068853/
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptional profiles associated with coronary artery disease in type 2 diabetes mellitus
    1
    1. scibot 08 May 2024
      SCR_005223

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    ncbi.nlm.nih.gov/pmc/articles/PMC11066158/
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    Quantitative proteomic profiling in brain subregions of mice exposed to open-field low-intensity blast reveals position-dependent blast effects
    1
    1. scibot 03 May 2024
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      DOI: 10.1007/s00193-024-01169-2

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    link.springer.com/article/10.1007/s00193-024-01169-2
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    Molecular targets of glucocorticoids that elucidate their therapeutic efficacy in aggressive lymphomas
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    1. scibot 03 May 2024
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    sciencedirect.com/science/article/pii/S1535610824001314
  13. Apr 2024
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FBXO32-mediated degradation of PTEN promotes lung adenocarcinoma progression
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    1. scibot 23 Apr 2024
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      DOI: 10.1038/s41419-024-06635-4

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    ncbi.nlm.nih.gov/pmc/articles/PMC11032391/
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    Identification of hypoxic macrophages in glioblastoma with therapeutic potential for vasculature normalization
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    1. scibot 20 Apr 2024
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      DOI: 10.1016/j.ccell.2024.03.013

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  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PALB2-mutated human mammary cells display a broad spectrum of morphological and functional abnormalities induced by increased TGFβ signaling
    1
    1. scibot 13 Apr 2024
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      DOI: 10.1007/s00018-024-05183-6

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    ncbi.nlm.nih.gov/pmc/articles/PMC11006627/
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The immunomodulatory impact of naturally derived neem leaf glycoprotein on the initiation progression model of 4NQO induced murine oral carcinogenesis: a preclinical study
    1
    1. scibot 10 Apr 2024
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      DOI: 10.3389/fimmu.2024.1325161

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    ncbi.nlm.nih.gov/pmc/articles/PMC10996442/
  18. Mar 2024
  19. www.sciencedirect.com www.sciencedirect.com
    Peripheral neuronal activation shapes the microbiome and alters gut physiology
    1
    1. scibot 22 Mar 2024
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      DOI: 10.1016/j.celrep.2024.113953

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    sciencedirect.com/science/article/pii/S221112472400281X
  20. www.mdpi.com www.mdpi.com
    The Chronic Effects of a Single Low-Intensity Blast Exposure on Phosphoproteome Networks and Cognitive Function Influenced by Mutant Tau Overexpression
    1
    1. scibot 19 Mar 2024
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      DOI: 10.3390/ijms25063338

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  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Novel HOXA10-Associated 5 Gene-Based Prognostic Signature for Stratification of Short-Term Survivors of Pancreatic Ductal Adenocarcinoma
    1
    1. scibot 16 Mar 2024
      RRID:SCR_005223

      DOI: 10.1158/1078-0432.CCR-23-0825

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    ncbi.nlm.nih.gov/pmc/articles/PMC10529249/
  22. elifesciences.org elifesciences.org
    Proteomic analysis shows decreased type I fibers and ectopic fat accumulation in skeletal muscle from women with PCOS
    1
    1. scibot 01 Mar 2024
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      DOI: 10.7554/eLife.87592

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    elifesciences.org/articles/87592
  23. Feb 2024
  24. link.springer.com link.springer.com
    Integrating Network Pharmacology and Experimental Verification to Explore the Pharmacological Mechanisms of Radix Paeoniae Rubra Against Glioma
    1
    1. scibot 22 Feb 2024
      RRID:SCR_005223

      DOI: 10.1007/s12010-024-04887-6

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    link.springer.com/article/10.1007/s12010-024-04887-6
  25. onlinelibrary.wiley.com onlinelibrary.wiley.com
    NMDA glutamate receptor antagonist MK-801 induces proteome changes in adult human brain slices which are partially counteracted by haloperidol and clozapine
    1
    1. scibot 14 Feb 2024
      RRID:SCR_005223

      DOI: 10.1111/jnc.16059

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    onlinelibrary.wiley.com/doi/10.1111/jnc.16059
  26. 52.53.155.43 52.53.155.43
    Influenza A virus propagation requires the activation of the unfolded protein response and the accumulation of insoluble protein aggregates
    1
    1. scibot 09 Feb 2024
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      DOI: 10.1016/j.isci.2024.109100

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    52.53.155.43/d3d22b34dc913e3c2adad8dc51a7839208721c99/PIIS2589004224003213-html.html
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Investigating HMGB1 as a Potential Serum Biomarker for Early Diabetic Nephropathy Monitoring by Quantitative Proteomics
    1
    1. scibot 03 Feb 2024
      RRID:SCR_005223

      DOI: 10.1016/j.isci.2024.108834

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    ncbi.nlm.nih.gov/pmc/articles/PMC10830865/
  28. Jan 2024
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience in Xenopus laevis tadpoles
    1
    1. scibot 24 Jan 2024
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      DOI: 10.1073/pnas.2316542121

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    ncbi.nlm.nih.gov/pmc/articles/PMC10801852/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Riboproteome remodelling during quiescence exit in Saccharomyces cerevisiae
    1
    1. scibot 20 Jan 2024
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      DOI: 10.1016/j.isci.2023.108727

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    ncbi.nlm.nih.gov/pmc/articles/PMC10792236/
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    TRIB3, as a robust prognostic biomarker for HNSC, is associated with poor immune infiltration and cancer cell immune evasion
    1
    1. scibot 19 Jan 2024
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      DOI: 10.3389/fimmu.2023.1290839

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    ncbi.nlm.nih.gov/pmc/articles/PMC10791810/
  32. www.sciencedirect.com www.sciencedirect.com
    TDP-43-stratified single-cell proteomics of postmortem human spinal motor neurons reveals protein dynamics in amyotrophic lateral sclerosis
    1
    1. scibot 10 Jan 2024
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      DOI: 10.1016/j.celrep.2023.113636

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    sciencedirect.com/science/article/pii/S2211124723016479
  33. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Metal dyshomeostasis in the substantia nigra of patients with Parkinson's disease or multiple sclerosis
    1
    1. scibot 09 Jan 2024
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      DOI: 10.1111/jnc.16040

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    onlinelibrary.wiley.com/doi/10.1111/jnc.16040
  34. Dec 2023
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The proteomic fingerprint in infants with single ventricle heart disease in the interstage period: evidence of chronic inflammation and widespread activation of biological networks
    1
    1. scibot 28 Dec 2023
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      DOI: 10.3389/fped.2023.1308700

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    ncbi.nlm.nih.gov/pmc/articles/PMC10748388/
  36. www.sciencedirect.com www.sciencedirect.com
    SARS-CoV-2 RNA stabilizes host mRNAs to elicit immunopathogenesis
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    1. scibot 22 Dec 2023
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      DOI: 10.1016/j.molcel.2023.11.032

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    sciencedirect.com/science/article/pii/S1097276523009784
  37. www.sciencedirect.com www.sciencedirect.com
    Serine-129 phosphorylation of α-synuclein is an activity-dependent trigger for physiologic protein-protein interactions and synaptic function
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    1. scibot 22 Dec 2023
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      DOI: 10.1016/j.neuron.2023.11.020

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    sciencedirect.com/science/article/pii/S0896627323008942
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Topoisomerase 1 Inhibition in MYC-Driven Cancer Promotes Aberrant R-Loop Accumulation to Induce Synthetic Lethality
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    1. scibot 20 Dec 2023
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      DOI: 10.1158/0008-5472.CAN-22-2948

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    ncbi.nlm.nih.gov/pmc/articles/PMC10722143/
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DriverMP enables improved identification of cancer driver genes
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    1. scibot 15 Dec 2023
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      DOI: 10.1093/gigascience/giad106

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    ncbi.nlm.nih.gov/pmc/articles/PMC10716827/
  40. www.sciencedirect.com www.sciencedirect.com
    Molecular determinants of the crosstalk between endosomal microautophagy and chaperone-mediated autophagy
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    1. scibot 07 Dec 2023
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      DOI: 10.1016/j.celrep.2023.113529

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    sciencedirect.com/science/article/pii/S2211124723015413
  41. Nov 2023
  42. link.springer.com link.springer.com
    Unraveling the molecular links between benzopyrene exposure, NASH, and HCC: an integrated bioinformatics and experimental study
    1
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      DOI: 10.1038/s41598-023-46440-1

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    link.springer.com/article/10.1038/s41598-023-46440-1
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    IL23R as an indicator of immune infiltration and poor prognosis in intrahepatic cholangiocarcinoma: a bioinformatics analysis
    1
    1. scibot 18 Nov 2023
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      DOI: 10.21037/tcr-23-455

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    ncbi.nlm.nih.gov/pmc/articles/PMC10643953/
  44. 52.53.155.43 52.53.155.43
    schall-latham-2023-predictive-modeling-of-oocyte-maternal-mrna-features-of-five-mammalian-species-reveals-potential (1)-html.html
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    1. scibot 18 Nov 2023
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      DOI: 10.6084/m9.figshare.22674448.v1

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    52.53.155.43/b38c22d2b0c9591d1f12b114a1f97bc735ea3c68/schall-latham-2023-predictive-modeling-of-oocyte-maternal-mrna-features-of-five-mammalian-species-reveals-potential (1)-html.html
  45. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Establishing an early indicator for data sharing and reuse
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    1. scibot 18 Nov 2023
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      DOI: 10.1002/leap.1586

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    onlinelibrary.wiley.com/doi/10.1002/leap.1586
  46. www.sciencedirect.com www.sciencedirect.com
    Skeletal muscle TFEB signaling promotes central nervous system function and reduces neuroinflammation during aging and neurodegenerative disease
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    1. scibot 17 Nov 2023
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      DOI: 10.1016/j.celrep.2023.113436

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    sciencedirect.com/science/article/pii/S2211124723014481
  47. www.sciencedirect.com www.sciencedirect.com
    Detection of early prognostic biomarkers for metastasis of Ewing's sarcoma in pediatric patients
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    1. scibot 10 Nov 2023
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      DOI: 10.1016/j.lfs.2023.122237

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    sciencedirect.com/science/article/pii/S002432052300872X
  48. Oct 2023
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comprehensive Analysis of Tumor Microenvironment Reveals Prognostic ceRNA Network Related to Immune Infiltration in Sarcoma
    1
    1. scibot 06 Oct 2023
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      DOI: 10.1158/1078-0432.CCR-22-3396

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  50. dx.doi.org dx.doi.org
    Chromatin accessibility landscape of human triple-negative breast cancer cell lines reveals variation by patient donor ancestry
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      DOI: 10.1158/2767-9764.CRC-23-0236

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    dx.doi.org/10.1158/2767-9764.CRC-23-0236
  51. Sep 2023
  52. link.springer.com link.springer.com
    Pan cancer characterization of genes whose expression has been associated with LINE-1 antisense promoter activity
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      DOI: 10.1186/s13100-023-00300-x

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  53. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
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    1. scibot 08 Sep 2023
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      DOI: 10.1016/j.celrep.2023.113111

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    sciencedirect.com/science/article/pii/S2211124723011221
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Prognosis signature for predicting the survival and immunotherapy response in esophageal carcinoma based on cellular senescence-related genes
    1
    1. scibot 02 Sep 2023
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      DOI: 10.3389/fonc.2023.1203351

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    ncbi.nlm.nih.gov/pmc/articles/PMC10470646/
  55. Jul 2023
  56. www.nature.com www.nature.com
    A novel transcription factor SIPA1: identification and verification in triple-negative breast cancer
    1
    1. scibot 29 Jul 2023
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      DOI: 10.1038/s41388-023-02787-3

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  57. www.sciencedirect.com www.sciencedirect.com
    Overexpression of LOX-1 in hepatocytes protects vascular smooth muscle cells from phenotype transformation and wire injury induced carotid neoatherosclerosis through ALOX15
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  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Prenatal Δ9-tetrahydrocannabinol exposure in males leads to motivational disturbances related to striatal epigenetic dysregulation
    1
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      DOI: 10.1016/j.biopsych.2021.09.017

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  59. www.sciencedirect.com www.sciencedirect.com
    Customization of the translational complex regulates mRNA-specific translation to control CNS regeneration
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      DOI: 10.1016/j.neuron.2023.06.005

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  60. Jun 2023
  61. europepmc.org europepmc.org
    F1000Research Article: Integrative transcriptomic and proteomic study of Zika viral infection reveals potential mechanisms for oncolytic therapy in neuroblastoma.
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    europepmc.org/article/ppr/ppr679275
  62. May 2023
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomic landscape of sensitivity to arsenic trioxide uncovered by genome-wide CRISPR-Cas9 screening
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    1. scibot 31 May 2023
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    ncbi.nlm.nih.gov/pmc/articles/PMC10214836/
  64. link.springer.com link.springer.com
    Bioinformatics and gene expression analysis of the legume F-box/WD40 proteins in NaCl and high temperature stress
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    1. scibot 09 May 2023
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      DOI: 10.1007/s10722-023-01592-x

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  65. link.springer.com link.springer.com
    iTRAQ-based comparative proteomics reveal an enhancing role of PRDX6 in the freezability of Mediterranean buffalo sperm
    1
    1. scibot 06 May 2023
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      DOI: 10.1186/s12864-023-09329-x

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  66. www.imrpress.com www.imrpress.com
    Potential New Therapeutic Approaches for Cisplatin-Resistant Testicular Germ Cell Tumors
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    1. scibot 05 May 2023
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      DOI: 10.31083/j.fbl2708245

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    imrpress.com/journal/FBL/27/8/10.31083/j.fbl2708245
  67. Apr 2023
  68. link.springer.com link.springer.com
    Entrectinib a Plausible Inhibitor for Osteopontin (SPP1) in Cervical Cancer—Integrated Bioinformatic Approach
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    1. scibot 25 Apr 2023
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      DOI: 10.1007/s12010-023-04541-7

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  69. www.sciencedirect.com www.sciencedirect.com
    Exercise training remodels inguinal white adipose tissue through adaptations in innervation, vascularization, and the extracellular matrix
    1
    1. scibot 15 Apr 2023
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    sciencedirect.com/science/article/pii/S2211124723004035
  70. www.sciencedirect.com www.sciencedirect.com
    TIAR and FMRP shape pro-survival nascent proteome of leukemia cells in the bone marrow microenvironment
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    1. scibot 13 Apr 2023
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      DOI: 10.1016/j.isci.2023.106543

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  71. link.springer.com link.springer.com
    NGS-based profiling identifies miRNAs and pathways dysregulated in cisplatin-resistant esophageal cancer cells
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      DOI: 10.1007/s10142-023-01041-z

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  72. Mar 2023
  73. www.sciencedirect.com www.sciencedirect.com
    Capture RIC-seq reveals positional rules of PTBP1-associated RNA loops in splicing regulation
    2
    1. scibot 28 Mar 2023
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      DOI: 10.1016/j.molcel.2023.03.001

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    sciencedirect.com/science/article/pii/S1097276523001582
  74. www.thelancet.com www.thelancet.com
    Metformin and simvastatin exert additive antitumour effects in glioblastoma via senescence-state: clinical and translational evidence
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      DOI: 10.1016/j.ebiom.2023.104484

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    thelancet.com/journals/ebiom/article/PIIS2352-3964(23)00049-X/abstract
  75. www.nature.com www.nature.com
    Increased retinoic acid signaling decreases lung metastasis in salivary adenoid cystic carcinoma by inhibiting the noncanonical Notch1 pathway
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      DOI: 10.1038/s12276-023-00957-7

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    nature.com/articles/s12276-023-00957-7
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomics profiling of vitreous humor reveals complement and coagulation components, adhesion factors, and neurodegeneration markers as discriminatory biomarkers of vitreoretinal eye diseases
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      DOI: 10.3389/fimmu.2023.1107295

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    ncbi.nlm.nih.gov/pmc/articles/PMC9978817/
  77. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Ceruloplasmin deficient mice show changes in PTM profiles of proteins involved in messenger RNA processing and neuronal projections and synaptic processes
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    1. scibot 03 Mar 2023
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      DOI: 10.1111/jnc.15754

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    onlinelibrary.wiley.com/doi/10.1111/jnc.15754
  78. Feb 2023
  79. link.springer.com link.springer.com
    Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson’s disease
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    1. scibot 25 Feb 2023
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      DOI: 10.1007/s00702-023-02604-x

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  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Immunogenetic Determinants of Susceptibility to Head and Neck Cancer in the Million Veteran Program Cohort
    1
    1. scibot 11 Feb 2023
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      DOI: 10.1158/0008-5472.CAN-22-1641

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    ncbi.nlm.nih.gov/pmc/articles/PMC9896026/
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cellular mechanism of action of forsythiaside for the treatment of diabetic kidney disease
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      DOI: 10.3389/fphar.2022.1096536

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    ncbi.nlm.nih.gov/pmc/articles/PMC9880420/
  82. Jan 2023
  83. www.futuremedicine.com www.futuremedicine.com
    Reliable epithelial-mesenchymal transition biomarkers for colorectal cancer detection
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      DOI: 10.2217/bmm-2022-0071

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    futuremedicine.com/doi/10.2217/bmm-2022-0071
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PDIA3 Activity Promotes Extracellular Accumulation of Proteins Relevant to Basal Breast Cancer Outcomes in Human MDA-MB-A231 Breast Cancer Cells
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    1. scibot 11 Jan 2023
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      DOI: 10.1152/ajpcell.00445.2022

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    ncbi.nlm.nih.gov/pmc/articles/PMC9799142/
  85. www.sciencedirect.com www.sciencedirect.com
    Neuronal and astrocytic contributions to Huntington’s disease dissected with zinc finger protein transcriptional repressors
    1
    1. scibot 11 Jan 2023
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      DOI: 10.1016/j.celrep.2022.111953

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    sciencedirect.com/science/article/pii/S221112472201854X
  86. www.sciencedirect.com www.sciencedirect.com
    Mapping transcriptional heterogeneity and metabolic networks in fatty livers at single-cell resolution
    1
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      DOI: 10.1016/j.isci.2022.105802

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    sciencedirect.com/science/article/pii/S2589004222020752
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Synthesize heterogeneous biological knowledge via representation learning for Alzheimer’s disease drug repurposing
    1
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      DOI: 10.1016/j.isci.2022.105678

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    ncbi.nlm.nih.gov/pmc/articles/PMC9804117/
  88. Dec 2022
  89. www.sciencedirect.com www.sciencedirect.com
    Motor neurons transplantation alleviates neurofibrogenesis during chronic degeneration by reversibly regulating Schwann cells epithelial-mesenchymal transition
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      DOI: 10.1016/j.expneurol.2022.114272

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    sciencedirect.com/science/article/pii/S0014488622002977
  90. link.springer.com link.springer.com
    Characterization, comparative, and functional analysis of arylacetamide deacetylase from Gnathostomata organisms
    1
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      DOI: 10.1186/s43141-022-00443-z

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  91. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An oncogene addiction phosphorylation signature and its derived scores inform tumor responsiveness to targeted therapies
    1
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      DOI: 10.1007/s00018-022-04634-2

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    ncbi.nlm.nih.gov/pmc/articles/PMC9734221/
  92. Nov 2022
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genes Whose Gain or Loss of Function Changes Type 1, 2A, 2X, or 2B Muscle Fibre Proportions in Mice—A Systematic Review
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      DOI: 10.3390/ijms232112933

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    ncbi.nlm.nih.gov/pmc/articles/PMC9658117/
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Extracellular vesicles from pristane-treated CD38-deficient mice express an anti-inflammatory neutrophil protein signature, which reflects the mild lupus severity elicited in these mice
    1
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      DOI: 10.3389/fimmu.2022.1013236

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    ncbi.nlm.nih.gov/pmc/articles/PMC9638146/
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell RNA sequencing reveals different signatures of mesenchymal stromal cell pluripotent-like and multipotent populations
    1
    1. scibot 09 Nov 2022
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      DOI: 10.1016/j.isci.2022.105395

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    ncbi.nlm.nih.gov/pmc/articles/PMC9633745/
  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploration of immune infiltration and feature genes in viral hepatitis-associated liver fibrosis using transcriptome data
    1
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      DOI: 10.21037/atm-22-2205

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    ncbi.nlm.nih.gov/pmc/articles/PMC9622482/
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genomic and transcriptomic study toward breast cancer
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      DOI: 10.3389/fgene.2022.989565

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    ncbi.nlm.nih.gov/pmc/articles/PMC9596791/
  98. Oct 2022
  99. www.sciencedirect.com www.sciencedirect.com
    Sorbitol dehydrogenase induction of cancer cell necroptosis and macrophage polarization in the HCC microenvironment suppresses tumor progression
    1
    1. scibot 19 Oct 2022
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      DOI: 10.1016/j.canlet.2022.215960

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    sciencedirect.com/science/article/pii/S0304383522004475
  100. Sep 2022
  101. f1000research.com f1000research.com
    F1000Research Article: Identification of prognostic biomarkers of invasive ductal carcinoma by an integrated bioinformatics approach.
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      DOI: 10.12688/f1000research.123714.1

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    f1000research.com/articles/11-1075
  102. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    E2F1 as a potential prognostic and therapeutic biomarker by affecting tumor development and immune microenvironment in hepatocellular carcinoma
    1
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  103. www.sciencedirect.com www.sciencedirect.com
    A small proportion of X-linked genes contribute to X chromosome upregulation in early embryos via BRD4-mediated transcriptional activation
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  104. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    NCOA4-mediated ferritinophagy is a pancreatic cancer dependency via maintenance of iron bioavailability for iron-sulfur cluster proteins
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  105. academic.oup.com academic.oup.com
    Comparative maternal protein profiling of mouse biparental and uniparental embryos
    1
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      DOI: 10.1093/gigascience/giac084

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac084/6691138
  106. Aug 2022
  107. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of CXCL10 and CXCL11 as the candidate genes involving the development of colitis-associated colorectal cancer
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      DOI: 10.3389/fgene.2022.945414

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  108. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Computational analysis on two putative mitochondrial protein-coding genes from the Emydura subglobosa genome: A functional annotation approach
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      DOI: 10.1371/journal.pone.0268031

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  109. aacrjournals.org aacrjournals.org
    Proteomic mapping and targeting of mitotic pericentriolar material in tumors bearing centrosome amplification
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      DOI: 10.1158/0008-5472.CAN-22-0225

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    aacrjournals.org/cancerres/article/82/14/2576/706950/Proteomic-Mapping-and-Targeting-of-Mitotic
  110. Jul 2022
  111. www.sciencedirect.com www.sciencedirect.com
    Group 3 innate lymphocytes make a distinct contribution to Type 17 immunity in bladder defence
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  112. www.sciencedirect.com www.sciencedirect.com
    Extracellular vesicles from thyroid cancer harbor a functional machinery involved in extracellular matrix remodeling
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  113. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Neoadjuvant chemotherapy induces genomic and transcriptomic changes in ovarian cancer
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  114. Jun 2022
  115. www.sciencedirect.com www.sciencedirect.com
    BAFFR activates PI3K/AKT signaling in human naive but not in switched memory B cells through direct interactions with B cell antigen receptors
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  116. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pan-Cancer Single-Cell Analysis Reveals the Core Factors and Pathway in Specific Cancer Stem Cells of Upper Gastrointestinal Cancer
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  117. May 2022
  118. aacrjournals.org aacrjournals.org
    Single cell characterization of the cellular landscape of acral melanoma identifies novel targets for immunotherapy
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    aacrjournals.org/clincancerres/article/28/10/2131/694823/Single-cell-Characterization-of-the-Cellular
  119. aacrjournals.org aacrjournals.org
    PET-Based Radiogenomics Supports mTOR Pathway Targeting for Hepatocellular Carcinoma
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    aacrjournals.org/clincancerres/article/28/9/1821/694445/PET-Based-Radiogenomics-Supports-mTOR-Pathway
  120. link.springer.com link.springer.com
    Alzheimer risk gene product Pyk2 suppresses tau phosphorylation and phenotypic effects of tauopathy
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      DOI: 10.1186/s13024-022-00526-y

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  121. Apr 2022
  122. www.sciencedirect.com www.sciencedirect.com
    The gut environment regulates bacterial gene expression which modulates susceptibility to bacteriophage infection
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  123. aacrjournals.org aacrjournals.org
    Lactate rewires lipid metabolism and sustains a metabolic-epigenetic axis in prostate cancer
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  124. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PGC1α-Mediated Metabolic Reprogramming Drives the Stemness of Pancreatic Precursor Lesions
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  125. Mar 2022
  126. www.sciencedirect.com www.sciencedirect.com
    Genome-wide identification and analysis of prognostic features in human cancers
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  127. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Cerebrospinal fluid of progressive multiple sclerosis patients reduces differentiation and immune functions of oligodendrocyte progenitor cells
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      DOI: 10.1002/glia.24165

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  128. www.sciencedirect.com www.sciencedirect.com
    Functional interactomes of the Ebola virus polymerase identified by proximity proteomics in the context of viral replication
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    The mTOR chromatin-bound interactome in prostate cancer
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  130. aacrjournals.org aacrjournals.org
    EP300 Selectively Controls the Enhancer Landscape of MYCN-Amplified Neuroblastoma
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    aacrjournals.org/cancerdiscovery/article/12/3/730/681918/EP300-Selectively-Controls-the-Enhancer-Landscape
  131. Feb 2022
  132. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Etoposide-induced DNA damage is increased in p53 mutants: identification of ATR and other genes that influence effects of p53 mutations on Top2-induced cytotoxicity
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      DOI: 10.18632/oncotarget.28195

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  133. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic Liability for Internalizing Versus Externalizing Behavior Manifests in the Developing and Adult Hippocampus: Insight From a Meta-analysis of Transcriptional Profiling Studies in a Selectively Bred Rat Model
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      DOI: 10.1016/j.biopsych.2020.05.024

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  134. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Quantitative proteomic profiling of the rat substantia nigra places glial fibrillary acidic protein at the hub of proteins dysregulated during aging: Implications for idiopathic Parkinson's disease
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      DOI: 10.1002/jnr.24622

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  135. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Widespread discrepancy in Nnt genotypes and genetic backgrounds complicates granzyme A and other knockout mouse studies
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      DOI: 10.7554/eLife.70207

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      DOI: 10.7554/eLife.70207

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  136. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomics Study Reveals the Anti-Depressive Mechanisms and the Compatibility Advantage of Chaihu-Shugan-San in a Rat Model of Chronic Unpredictable Mild Stress
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      DOI: 10.3389/fphar.2021.791097

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  137. Jan 2022
  138. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SIPA1 Enhances Aerobic Glycolysis Through HIF-2α Pathway to Promote Breast Cancer Metastasis
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      DOI: 10.3389/fcell.2021.779169

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  139. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
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      DOI: 10.1111/bph.15773

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  140. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Salivary ZG16B expression loss follows exocrine gland dysfunction related to oral Chronic Graft-Versus-Host Disease
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      DOI: 10.1016/j.isci.2021.103592

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  141. Dec 2021
  142. www.frontiersin.org www.frontiersin.org
    Extracellular Vesicles Induce an Aggressive Phenotype in Luminal Breast Cancer Cells Via PKM2 Phosphorylation
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      DOI: 10.3389/fonc.2021.785450

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  143. www.sciencedirect.com www.sciencedirect.com
    Shed CNTNAP2 ectodomain is detectable in CSF and regulates Ca2+ homeostasis and network synchrony via PMCA2/ATP2B2
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      DOI: 10.1016/j.neuron.2021.11.025

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  144. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Lysine Acetylation in the Proteome of Renal Tubular Epithelial Cells in Diabetic Nephropathy
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      DOI: 10.3389/fgene.2021.767135

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  145. www.sciencedirect.com www.sciencedirect.com
    Chronic calcium signaling in IgE+ B cells limits plasma cell differentiation and survival
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      DOI: 10.1016/j.immuni.2021.11.006

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  146. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Biomarkers in a socially exchanged fluid reflect colony maturity, behavior, and distributed metabolism
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      DOI: 10.7554/eLife.74005

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  147. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proximity labeling identifies LOTUS domain proteins that promote the formation of perinuclear germ granules in C. elegans
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      DOI: 10.7554/eLife.72276

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  148. Nov 2021
  149. www.sciencedirect.com www.sciencedirect.com
    Statins affect cancer cell plasticity with distinct consequences for tumor progression and metastasis
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  150. www.sciencedirect.com www.sciencedirect.com
    Hif-1a suppresses ROS-induced proliferation of cardiac fibroblasts following myocardial infarction
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      DOI: 10.1016/j.stem.2021.10.009

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  151. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disrupted PGR-B and ESR1 signaling underlies defective decidualization linked to severe preeclampsia
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  152. Oct 2021
  153. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Optical Coherence Tomography Angiography Characteristics Serve as Retinal Vein Occlusion Therapeutic Biomarkers for Dexamethasone Intravitreal Implant
    1
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      DOI: 10.1155/2021/3510036

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  154. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Protein profiling in the habenula after chronic (–)-menthol exposure in mice
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      DOI: 10.1111/jnc.15495

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  155. www.hindawi.com www.hindawi.com
    Optical Coherence Tomography Angiography Characteristics Serve as Retinal Vein Occlusion Therapeutic Biomarkers for Dexamethasone Intravitreal Implant
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  156. www.sciencedirect.com www.sciencedirect.com
    D-SCRIPT translates genome to phenome with sequence-based, structure-aware, genome-scale predictions of protein-protein interactions
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  157. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A novel insight into differential expression profiles of sporadic cerebral cavernous malformation patients with different symptoms
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  158. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Age-dependent changes in protein incorporation into collagen-rich tissues of mice by in vivo pulsed SILAC labelling
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  159. Sep 2021
  160. www.sciencedirect.com www.sciencedirect.com
    Muscle-secreted neurturin couples myofiber oxidative metabolism and slow motor neuron identity
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  161. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comprehensive Analysis of Key Genes, Signaling Pathways and miRNAs in Human Knee Osteoarthritis: Based on Bioinformatics
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  162. Aug 2021
  163. www.sciencedirect.com www.sciencedirect.com
    Pro-inflammatory β cell small extracellular vesicles induce β cell failure through activation of the CXCL10/CXCR3 axis in diabetes
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    Epigenomic and transcriptional profiling identifies impaired glyoxylate detoxification in NAFLD as a risk factor for hyperoxaluria
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    Dynamic bi-directional phosphorylation events associated with the reciprocal regulation of synapses during homeostatic up- and down-scaling
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  166. onlinelibrary.wiley.com onlinelibrary.wiley.com
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  167. www.frontiersin.org www.frontiersin.org
    Sex Differences in the Ventral Tegmental Area and Nucleus Accumbens Proteome at Baseline and Following Nicotine Exposure
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  168. Jul 2021
  169. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Rapid remote conditioning mediates modulation of blood cell paracrine activity and leads to the production of a secretome with neuroprotective features
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  170. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Gene expression changes induced by valproate in the process of rat hippocampal neural stem cells differentiation
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  171. www.frontiersin.org www.frontiersin.org
    Understanding the Mechanistic Contribution of Herbal Extracts in Compound Kushen Injection With Transcriptome Analysis
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  172. elifesciences.org elifesciences.org
    Human Nup98 regulates the localization and activity of DExH/D-box helicase DHX9
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  173. www.biorxiv.org www.biorxiv.org
    C1orf109L promote R-loop accumulation induced DNA damage to inhibit cell growth
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  174. www.sciencedirect.com www.sciencedirect.com
    Noncanonical Modulation of the eIF2 Pathway Controls an Increase in Local Translation during Neural Wiring
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  175. onlinelibrary.wiley.com onlinelibrary.wiley.com
    LncRNAs associated with multiple sclerosis expressed in the Th1 cell lineage
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  176. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of potential key genes associated with ovarian clear cell carcinoma
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  177. www.sciencedirect.com www.sciencedirect.com
    Interactome and Proteome Dynamics Uncover Immune Modulatory Associations of the Pathogen Sensing Factor cGAS
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    MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis
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    ORY-1001, a Potent and Selective Covalent KDM1A Inhibitor, for the Treatment of Acute Leukemia
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  180. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quantitative analysis of tyrosine phosphorylation from FFPE tissues reveals patient-specific signaling networks
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  181. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The magnesium transporter NIPAL1 is a pancreatic islet–expressed protein that conditionally impacts insulin secretion
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    Deletion of RBMX RGG/RG motif in Shashi-XLID syndrome leads to aberrant p53 activation and neuronal differentiation defects
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  183. Jun 2021
  184. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Specific N-cadherin–dependent pathways drive human breast cancer dormancy in bone marrow
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      DOI: 10.26508/lsa.202000969

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  185. elifesciences.org elifesciences.org
    Quantitative mapping of human hair greying and reversal in relation to life stress
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      DOI: 10.7554/eLife.67437

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  186. www.sciencedirect.com www.sciencedirect.com
    Nascent RNA antagonizes the interaction of a set of regulatory proteins with chromatin
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  187. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Differential methylation of G-protein coupled receptor signaling genes in gastrointestinal neuroendocrine tumors
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  188. May 2021
  189. www.nature.com www.nature.com
    JunB is a key regulator of multiple myeloma bone marrow angiogenesis
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      DOI: 10.1038/s41375-021-01271-9

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  190. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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  191. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The biphasic and age-dependent impact of klotho on hallmarks of aging and skeletal muscle function
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      DOI: 10.7554/eLife.61138

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  192. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Cerebrospinal fluid and serum protein markers in autism: a co‐twin study
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      DOI: 10.1111/jnc.15338

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  193. www.sciencedirect.com www.sciencedirect.com
    Novel association of genetic variants in non-coding regulatory regions with HIV-1 infection
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  194. Apr 2021
  195. www.sciencedirect.com www.sciencedirect.com
    A Cell-Autonomous Signature of Dysregulated Protein Phosphorylation Underlies Muscle Insulin Resistance in Type 2 Diabetes
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    Molecular pathways behind acquired obesity: adipose tissue and skeletal muscle multiomics in monozygotic twin pairs discordant for BMI
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  197. Mar 2021
  198. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Microglial trogocytosis and the complement system regulate axonal pruning in vivo
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      DOI: 10.7554/eLife.62167

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  199. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The expression patterns and prognostic significance of pleckstrin homology-like domain family A (PHLDA) in lung cancer and malignant mesothelioma
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      DOI: 10.21037/jtd-20-2909

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  200. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Zinc Finger Protein CTCF Regulates Extracellular Matrix (ECM)-Related Gene Expression Associated With the Wnt Signaling Pathway in Gastric Cancer
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      DOI: 10.3389/fonc.2020.625633

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  201. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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  202. Feb 2021
  203. www.frontiersin.org www.frontiersin.org
    A Connected Network of Interacting Proteins Is Involved in Human-Tau Toxicity in Drosophila
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      DOI: 10.3389/fnins.2020.00068

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    The histone demethylase KDM5 is required for synaptic structure and function at the Drosophila neuromuscular junction
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  205. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila
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  206. elifesciences.org elifesciences.org
    Stem cell transplantation rescued a primary open-angle glaucoma mouse model
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  207. Dec 2020
  208. www.cell.com www.cell.com
    Neuropeptides Modulate Local Astrocytes to Regulate Adult Hippocampal Neural Stem Cells
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  209. www.frontiersin.org www.frontiersin.org
    Lysine in Combination With Estradiol Promote Dissemination of Estrogen Receptor Positive Breast Cancer via Upregulation of U2AF1 and RPN2 Proteins
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  210. www.cell.com www.cell.com
    Smoothelin-like 2 Inhibits Coronin-1B to Stabilize the Apical Actin Cortex during Epithelial Morphogenesis
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    cell.com/current-biology/abstract/S0960-9822(20)31685-7
  211. onlinelibrary.wiley.com onlinelibrary.wiley.com
    RAB5A is associated with genes involved in exosome secretion: Integration of bioinformatics analysis and experimental validation
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      DOI: 10.1002/jcb.29871

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  212. Oct 2020
  213. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Coding transcriptome analyses reveal altered functions underlying immunotolerance of PEG-fused rat sciatic nerve allografts
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      DOI: 10.1186/s12974-020-01953-8

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  214. Sep 2020
  215. www.sciencedirect.com www.sciencedirect.com
    Interactome Mapping Provides a Network of Neurodegenerative Disease Proteins and Uncovers Widespread Protein Aggregation in Affected Brains
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  216. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Endogenous siRNAs promote proteostasis and longevity in germline-less Caenorhabditis elegans
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      DOI: 10.7554/eLife.50896

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  217. elifesciences.org elifesciences.org
    Integrative analysis of large-scale loss-of-function screens identifies robust cancer-associated genetic interactions
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      DOI: 10.7554/eLife.58925

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  218. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide Identification of Genes Involved in General Acid Stress and Fluoride Toxicity in Saccharomyces cerevisiae
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      DOI: 10.3389/fmicb.2020.01410

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    ncbi.nlm.nih.gov/pmc/articles/PMC7329995/
  219. academic.oup.com academic.oup.com
    Bioentity2vec: Attribute- and behavior-driven representation for predicting multi-type relationships between bioentities
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      DOI: 10.1093/gigascience/giaa032

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    academic.oup.com/gigascience/article/9/6/giaa032/5856977
  220. link.springer.com link.springer.com
    Angiostrongylus cantonensis Galectin-1 interacts with Annexin A2 to impair the viability of macrophages via activating JNK pathway
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      DOI: 10.1186/s13071-020-04038-w

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  221. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Essential Functions of Glycans in Human Epithelia Dissected by a CRISPR-Cas9-Engineered Human Organotypic Skin Model
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      DOI: 10.1016/j.devcel.2020.06.039

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  222. link.springer.com link.springer.com
    Key genes with prognostic values in suppression of osteosarcoma metastasis using comprehensive analysis
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      DOI: 10.1186/s12885-020-6542-z

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  223. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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      DOI: 10.1111/bph.15142

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  224. Jan 2020
  225. www.sciencedirect.com www.sciencedirect.com
    Molecular Profiling and Functional Analysis of Macrophage-Derived Tumor Extracellular Vesicles
    1
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      DOI: 10.1016/j.celrep.2019.05.008

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    sciencedirect.com/science/article/pii/S2211124719306199
  226. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Expression and clinical value of PD‐L1 which is regulated by BRD4 in tongue squamous cell carcinoma
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      DOI: 10.1002/jcb.29420

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  227. www.sciencedirect.com www.sciencedirect.com
    TREM2 Acts Downstream of CD33 in Modulating Microglial Pathology in Alzheimer’s Disease
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      DOI: 10.1016/j.neuron.2019.06.010

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  228. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
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      DOI: 10.1111/bph.14802

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  229. www.sciencedirect.com www.sciencedirect.com
    Key genes associated with diabetes mellitus and hepatocellular carcinoma
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      DOI: 10.1016/j.prp.2019.152510

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    sciencedirect.com/science/article/pii/S0344033819307551
  230. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Integrative analyses of key genes and regulatory elements in fluoride‐affected osteosarcoma
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      DOI: 10.1002/jcb.28807

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  231. www.sciencedirect.com www.sciencedirect.com
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      DOI: 10.1016/j.cell.2019.03.015

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  232. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      DOI: 10.7554/eLife.42426

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  233. www.sciencedirect.com www.sciencedirect.com
    LRH1-driven transcription factor circuitry for hepatocyte identity: Super-enhancer cistromic analysis
    1
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      DOI: 10.1016/j.ebiom.2018.12.056

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    sciencedirect.com/science/article/pii/S2352396418306339
  234. Nov 2018
  235. www.sciencedirect.com www.sciencedirect.com
    Novel RNA-Affinity Proteogenomics Dissects Tumor Heterogeneity for Revealing Personalized Markers in Precision Prognosis of Cancer
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  236. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of regulators of the innate immune response to cytosolic DNA and retroviral infection by an integrative approach
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  237. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Diurnal Timing of Starvation Differently Impacts Murine Hepatic Gene Expression and Lipid Metabolism – A Systems Biology Analysis Using Self-Organizing Maps
    1
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  238. www.sciencedirect.com www.sciencedirect.com
    Identification of Chemotherapy-Induced Leukemic-Regenerating Cells Reveals a Transient Vulnerability of Human AML Recurrence
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    sciencedirect.com/science/article/pii/S1535610818303672
  239. www.sciencedirect.com www.sciencedirect.com
    Interrogating the ccm-3 Gene Network
    1
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      STRING

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  240. www.sciencedirect.com www.sciencedirect.com
    Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response
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    sciencedirect.com/science/article/pii/S1074761318303443
  241. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Mitochondrial dysfunction in human skeletal muscle biopsies of lipid storage disorder
    1
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    onlinelibrary.wiley.com/doi/full/10.1111/jnc.14318