75 Matching Annotations
  1. Nov 2024
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Building a community-driven bioinformatics platform to facilitate Cannabis sativa multi-omics research
    1
    1. scibot 07 Nov 2024
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.137

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    pmc.ncbi.nlm.nih.gov/articles/PMC11515022/
  3. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    CannSeek? Yes we Can! An open-source single nucleotide polymorphism database and analysis portal for Cannabis sativa
    1
    1. scibot 07 Nov 2024
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.135

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    pmc.ncbi.nlm.nih.gov/articles/PMC11480739/
  4. Oct 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation
    1
    1. scibot 02 Oct 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae065

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    ncbi.nlm.nih.gov/pmc/articles/PMC11440432/
  6. Sep 2024
  7. www.sciencedirect.com www.sciencedirect.com
    Lysosome-related organelle integrity suppresses TIR-1 aggregation to restrain toxic propagation of p38 innate immunity
    1
    1. scibot 25 Sep 2024
      RRID:SCR_005227

      DOI: 10.1016/j.celrep.2024.114674

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    sciencedirect.com/science/article/pii/S2211124724010258
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disentangling river and swamp buffalo genetic diversity: initial insights from the 1000 Buffalo Genomes Project
    1
    1. scibot 12 Sep 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae053

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    ncbi.nlm.nih.gov/pmc/articles/PMC11382405/
  9. Aug 2024
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
    1
    1. scibot 19 Aug 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae048

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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  11. www.tandfonline.com www.tandfonline.com
    Drought-induced molecular changes in crown of various barley phytohormone mutants
    1
    1. scibot 18 Aug 2024
      RRID:SCR_005227

      DOI: 10.1080/15592324.2024.2371693

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    tandfonline.com/doi/abs/10.1080/15592324.2024.2371693
  12. Jul 2024
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Innovative approach for high-throughput exploiting sex-specific markers in Japanese parrotfish Oplegnathus fasciatus
    1
    1. scibot 23 Jul 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae045

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    ncbi.nlm.nih.gov/pmc/articles/PMC11258905/
  14. www.biorxiv.org www.biorxiv.org
    PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
    1
    1. scibot 16 Jul 2024
      RRID:SCR_005227

      DOI: 10.1101/2024.06.26.600753

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    biorxiv.org/content/10.1101/2024.06.26.600753v1
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
    1
    1. scibot 02 Jul 2024
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.127

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    ncbi.nlm.nih.gov/pmc/articles/PMC11211761/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Drought-induced molecular changes in crown of various barley phytohormone mutants
    1
    1. scibot 02 Jul 2024
      RRID:SCR_005227

      DOI: 10.1080/15592324.2024.2371693

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    ncbi.nlm.nih.gov/pmc/articles/PMC11210921/
  17. Jun 2024
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus
    1
    1. scibot 22 Jun 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae029

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170218/
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Uncovering strain- and age-dependent innate immune responses to SARS-CoV-2 infection in air-liquid-interface cultured nasal epithelia
    1
    1. scibot 14 Jun 2024
      RRID:SCR_005227

      DOI: 10.1016/j.isci.2024.110009

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    ncbi.nlm.nih.gov/pmc/articles/PMC11166695/
  20. May 2024
  21. www.biorxiv.org www.biorxiv.org
    Unraveling Genome- and Immunome-wide Genetic Diversity in Jaguars (Panthera onca): Implications for Targeted Conservation
    1
    1. scibot 17 May 2024
      RRID:SCR_00522787

      DOI: 10.1101/2024.05.06.592690

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      Curator: @mzhang007

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      DOI:10.1101/2024.05.06.592690 RRIDCUR:Unresolved RRID:SCR_005227
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    biorxiv.org/content/10.1101/2024.05.06.592690v1
  22. www.sciencedirect.com www.sciencedirect.com
    Genome sequence analyses identify novel risk loci for multiple system atrophy
    1
    1. scibot 03 May 2024
      RRID:SCR_005227

      DOI: 10.1016/j.neuron.2024.04.002

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    sciencedirect.com/science/article/pii/S089662732400240X
  23. Apr 2024
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology
    1
    1. scibot 20 Apr 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giae019

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    ncbi.nlm.nih.gov/pmc/articles/PMC11020238/
  25. Mar 2024
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A novel type of monocytic leukemia stem cell revealed by the clinical use of venetoclax-based therapy
    1
    1. scibot 06 Mar 2024
      RRID:SCR_005227

      DOI: 10.1158/2159-8290.CD-22-1297

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    ncbi.nlm.nih.gov/pmc/articles/PMC10527971/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Establishment and characterization of an Epstein-Barr virus-positive cell line from a non-keratinizing differentiated primary nasopharyngeal carcinoma
    1
    1. scibot 06 Mar 2024
      RRID:SCR_005227

      DOI: 10.1158/2767-9764.CRC-23-0341

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    ncbi.nlm.nih.gov/pmc/articles/PMC10911800/
  28. Feb 2024
  29. www.biorxiv.org www.biorxiv.org
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
    1
    1. scibot 15 Feb 2024
      RRID:SCR_005227

      DOI: 10.1101/2024.01.28.577610

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    biorxiv.org/content/10.1101/2024.01.28.577610v1
  30. Jan 2024
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
    1
    1. scibot 20 Jan 2024
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10795108/
  32. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
    1
    1. scibot 18 Jan 2024
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad110

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    dx.doi.org/10.1093/gigascience/giad110
  33. Dec 2023
  34. www.sciencedirect.com www.sciencedirect.com
    Genetic swamping of the critically endangered Scottish wildcat was recent and accelerated by disease
    1
    1. scibot 02 Dec 2023
      RRID:SCR_005227

      DOI: 10.1016/j.cub.2023.10.026

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    sciencedirect.com/science/article/pii/S0960982223014240
  35. Nov 2023
  36. link.springer.com link.springer.com
    Development of SNP markers to identify the sex of the giant panda from naturally degraded fecal samples
    1
    1. scibot 25 Nov 2023
      RRID:SCR_005227

      DOI: 10.1007/s12686-023-01326-2

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    link.springer.com/article/10.1007/s12686-023-01326-2
  37. Oct 2023
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
    1. scibot 05 Oct 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad079

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction and analysis of the chromosome-level haplotype-resolved genomes of two Crassostrea oyster congeners: Crassostrea angulata and Crassostrea gigas
    1
    1. scibot 05 Oct 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad077

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    ncbi.nlm.nih.gov/pmc/articles/PMC10546077/
  40. Sep 2023
  41. 52.53.155.43 52.53.155.43
    jkad203-html.html
    1
    1. scibot 22 Sep 2023
      RRID:SCR_005227

      DOI: 10.1093/g3journal/jkad203

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    52.53.155.43/213eef494e744243d5c25ee25ef9fbca7c526326/jkad203-html.html
  42. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
    1
    1. scibot 08 Sep 2023
      RRID:SCR_005227

      DOI: 10.1016/j.celrep.2023.113111

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    sciencedirect.com/science/article/pii/S2211124723011221
  43. Aug 2023
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome resequencing reveals independent domestication and breeding improvement of naked oat
    1
    1. scibot 03 Aug 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad061

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    ncbi.nlm.nih.gov/pmc/articles/PMC10390318/
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide SNP and Indel Discovery in Abaca (Musa textilis Née) and among Other Musa spp. for Abaca Genetic Resources Management
    1
    1. scibot 01 Aug 2023
      RRID:SCR_005227

      DOI: 10.3390/cimb45070365

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    ncbi.nlm.nih.gov/pmc/articles/PMC10377871/
  46. Jul 2023
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
    1
    1. scibot 25 Jul 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad051

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    ncbi.nlm.nih.gov/pmc/articles/PMC10360393/
  48. Jun 2023
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of transcriptional regulatory variants in pig duodenum, liver, and muscle tissues
    1
    1. scibot 27 Jun 2023
      RRID:SCR_005227

      DOI: 10.1093/gigascience/giad042

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    ncbi.nlm.nih.gov/pmc/articles/PMC10290502/
  50. May 2023
  51. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Novel variants underlying autosomal recessive neurodevelopmental disorders with intellectual disability in Iranian consanguineous families
    1
    1. scibot 05 May 2023
      SCR_005227

      DOI: 10.1002/jcla.24241

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    onlinelibrary.wiley.com/doi/full/10.1002/jcla.24241
  52. Apr 2023
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structurally Complex Osteosarcoma Genomes Exhibit Limited Heterogeneity within Individual Tumors and across Evolutionary Time
    1
    1. scibot 14 Apr 2023
      RRID:SCR_005227

      DOI: 10.1158/2767-9764.CRC-22-0348

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    ncbi.nlm.nih.gov/pmc/articles/PMC10093779/
  54. Mar 2023
  55. europepmc.org europepmc.org
    Metagenomic analysis of coastal Kenya female Aedes aegypti mosquito ...
    2
    1. scibot 30 Mar 2023
      RRID:SCR_005227

      DOI: 10.12688/wellcomeopenres.18868.1

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    2. scibot 30 Mar 2023
      RRID:SCR_005227

      DOI: 10.12688/wellcomeopenres.18868.1

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    europepmc.org/article/ppr/ppr634883
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.19

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.34

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.69

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.40

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005227

      DOI: 10.46471/gigabyte.68

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  61. Feb 2023
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    Expansion and loss of sperm nuclear basic protein genes in Drosophila correspond with genetic conflicts between sex chromosomes
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  64. Jan 2023
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    Genome Reporting for Healthy Populations—Pipeline for Genomic Screening from the GENCOV COVID‐19 Study
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  66. Dec 2022
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    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
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  69. Nov 2022
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    A single-cell transcriptome atlas of glial diversity in the human hippocampus across the postnatal lifespan
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  71. Oct 2022
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    Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population
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  73. Aug 2022
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    The evolution of a counter-defense mechanism in a virus constrains its host range
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  75. Jul 2022
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    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
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  77. Jun 2022
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    The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia
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    Quantification of neoantigen-mediated immunoediting in cancer evolution
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  80. May 2022
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    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
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  82. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
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  83. Mar 2022
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    Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater
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    GWAS in people of Middle Eastern descent reveals a locus protective of kidney function—a cross-sectional study
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  86. Feb 2022
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    An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
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  88. Nov 2021
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    A sex-specific evolutionary interaction between ADCY9 and CETP
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  90. Aug 2021
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    Proneural genes define ground-state rules to regulate neurogenic patterning and cortical folding
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    Enhancer RNA m6A methylation facilitates transcriptional condensate formation and gene activation
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  99. May 2021
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    Transcriptional Programs of Circuit Assembly in the Drosophila Visual System
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    POLE Mutation Spectra Are Shaped by the Mutant Allele Identity, Its Abundance, and Mismatch Repair Status
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    How to characterize a strain? Clonal heterogeneity in industrial Saccharomyces influences both phenotypes and heterogeneity in phenotypes
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    Whole-genome analysis of giraffe supports four distinct species
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  104. Apr 2021
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    A common 1.6 mb Y-chromosomal inversion predisposes to subsequent deletions and severe spermatogenic failure in humans
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  106. Mar 2021
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    New Insights Into Mitochondrial DNA Reconstruction and Variant Detection in Ancient Samples
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  108. Sep 2020
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  110. Jan 2020
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    A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity
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    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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  113. Nov 2017
  114. elifesciences.org elifesciences.org
    Cell differentiation defines acute and chronic infection cell types in Staphylococcus aureus
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    An expanded mammal mitogenome dataset from Southeast Asia
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