92 Matching Annotations
  1. Aug 2025
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    AREG and EREG Are Predictive Biomarkers of Response to EGFR Inhibition in Gastroesophageal Cancer
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    pmc.ncbi.nlm.nih.gov/articles/PMC12355176/
  3. Jun 2025
  4. gigabytejournal.com gigabytejournal.com
    A draft genome assembly for the dart-poison frog Phyllobates terribilis
    1
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    gigabytejournal.com/articles/157
  5. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level reference genome for the medically important Arabian horned viper (Cerastes gasperettii)
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12143202/
  6. May 2025
  7. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Clear-Cell Renal Cell Carcinoma Molecular Subtypes Differ by African and European Genetic Similarity
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    pmc.ncbi.nlm.nih.gov/articles/PMC12044083/
  8. www.sciencedirect.com www.sciencedirect.com
    Inter-host diversity associated with age, sex, and menstrual cycle modulates clinical manifestations in DENV-2 patients
    1
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    sciencedirect.com/science/article/pii/S2589004225007394
  9. Apr 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Interspecific hybridization in Brassica species leads to changes in agronomic traits through the regulation of gene expression by chromatin accessibility and DNA methylation
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12012897/
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Germline Pathogenic DROSHA Variants Are Linked to Pineoblastoma and Wilms Tumor Predisposition
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11995001/
  12. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Telomere-to-telomere genome assembly of Electrophorus electricus provides insights into the evolution of electric eels
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11959694/
  13. Mar 2025
  14. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Characteristics and filtering of low-frequency artificial short deletion variations based on nanopore sequencing
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    pmc.ncbi.nlm.nih.gov/articles/PMC11927395/
  15. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Draft genome of the endangered visayan spotted deer (Rusa alfredi), a Philippine endemic species
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11876970/
  16. Feb 2025
  17. 52.53.155.43 52.53.155.43
    PDF-html.html
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    52.53.155.43/3f15b87d98f941e9a84b5e41f881bf902254c0f2/PDF-html.html
  18. www.sciencedirect.com www.sciencedirect.com
    Microevolution of Cryptococcus neoformans in high CO2 converges on mutations isolated from patients with relapsed cryptococcosis
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    sciencedirect.com/science/article/pii/S2211124725001202
  19. Jan 2025
  20. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Genomes reveal pervasive distant hybridization in nature among cyprinid fishes
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    pmc.ncbi.nlm.nih.gov/articles/PMC11779505/
  21. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A chromosome-level, haplotype-resolved genome assembly and annotation for the Eurasian minnow (Leuciscidae: Phoxinus phoxinus) provide evidence of haplotype diversity
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11775470/
  22. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Polyploid genome assembly of Cardamine chenopodiifolia
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    pmc.ncbi.nlm.nih.gov/articles/PMC11693932/
  23. Dec 2024
  24. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Whole-genome re-sequencing of the Baikal seal and other phocid seals for a glimpse into their genetic diversity, demographic history, and phylogeny
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11602651/
  25. www.sciencedirect.com www.sciencedirect.com
    Genomic insights into Neolithic founding paternal lineages around the Qinghai-Xizang Plateau using integrated YanHuang resource
    1
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    sciencedirect.com/science/article/pii/S258900422402683X
  26. Nov 2024
  27. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Building a community-driven bioinformatics platform to facilitate Cannabis sativa multi-omics research
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11515022/
  28. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    CannSeek? Yes we Can! An open-source single nucleotide polymorphism database and analysis portal for Cannabis sativa
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11480739/
  29. Oct 2024
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    V-pipe 3.0: a sustainable pipeline for within-sample viral genetic diversity estimation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11440432/
  31. Sep 2024
  32. www.sciencedirect.com www.sciencedirect.com
    Lysosome-related organelle integrity suppresses TIR-1 aggregation to restrain toxic propagation of p38 innate immunity
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    sciencedirect.com/science/article/pii/S2211124724010258
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disentangling river and swamp buffalo genetic diversity: initial insights from the 1000 Buffalo Genomes Project
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    ncbi.nlm.nih.gov/pmc/articles/PMC11382405/
  34. Aug 2024
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  36. www.tandfonline.com www.tandfonline.com
    Drought-induced molecular changes in crown of various barley phytohormone mutants
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    tandfonline.com/doi/abs/10.1080/15592324.2024.2371693
  37. Jul 2024
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Innovative approach for high-throughput exploiting sex-specific markers in Japanese parrotfish Oplegnathus fasciatus
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    ncbi.nlm.nih.gov/pmc/articles/PMC11258905/
  39. www.biorxiv.org www.biorxiv.org
    PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
    1
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    biorxiv.org/content/10.1101/2024.06.26.600753v1
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
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    ncbi.nlm.nih.gov/pmc/articles/PMC11211761/
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Drought-induced molecular changes in crown of various barley phytohormone mutants
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11210921/
  42. Jun 2024
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus
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    ncbi.nlm.nih.gov/pmc/articles/PMC11170218/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Uncovering strain- and age-dependent innate immune responses to SARS-CoV-2 infection in air-liquid-interface cultured nasal epithelia
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    ncbi.nlm.nih.gov/pmc/articles/PMC11166695/
  45. May 2024
  46. www.biorxiv.org www.biorxiv.org
    Unraveling Genome- and Immunome-wide Genetic Diversity in Jaguars (Panthera onca): Implications for Targeted Conservation
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    biorxiv.org/content/10.1101/2024.05.06.592690v1
  47. www.sciencedirect.com www.sciencedirect.com
    Genome sequence analyses identify novel risk loci for multiple system atrophy
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    sciencedirect.com/science/article/pii/S089662732400240X
  48. Apr 2024
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11020238/
  50. Mar 2024
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A novel type of monocytic leukemia stem cell revealed by the clinical use of venetoclax-based therapy
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    ncbi.nlm.nih.gov/pmc/articles/PMC10527971/
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Establishment and characterization of an Epstein-Barr virus-positive cell line from a non-keratinizing differentiated primary nasopharyngeal carcinoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC10911800/
  53. Feb 2024
  54. www.biorxiv.org www.biorxiv.org
    Low-coverage whole genome sequencing for a highly selective cohort of severe COVID-19 patients
    1
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    biorxiv.org/content/10.1101/2024.01.28.577610v1
  55. Jan 2024
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
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    ncbi.nlm.nih.gov/pmc/articles/PMC10795108/
  57. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
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    dx.doi.org/10.1093/gigascience/giad110
  58. Dec 2023
  59. www.sciencedirect.com www.sciencedirect.com
    Genetic swamping of the critically endangered Scottish wildcat was recent and accelerated by disease
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    sciencedirect.com/science/article/pii/S0960982223014240
  60. Nov 2023
  61. link.springer.com link.springer.com
    Development of SNP markers to identify the sex of the giant panda from naturally degraded fecal samples
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    link.springer.com/article/10.1007/s12686-023-01326-2
  62. Oct 2023
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction and analysis of the chromosome-level haplotype-resolved genomes of two Crassostrea oyster congeners: Crassostrea angulata and Crassostrea gigas
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    ncbi.nlm.nih.gov/pmc/articles/PMC10546077/
  65. Sep 2023
  66. 52.53.155.43 52.53.155.43
    jkad203-html.html
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    52.53.155.43/213eef494e744243d5c25ee25ef9fbca7c526326/jkad203-html.html
  67. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
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    sciencedirect.com/science/article/pii/S2211124723011221
  68. Aug 2023
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome resequencing reveals independent domestication and breeding improvement of naked oat
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    ncbi.nlm.nih.gov/pmc/articles/PMC10390318/
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome-Wide SNP and Indel Discovery in Abaca (Musa textilis Née) and among Other Musa spp. for Abaca Genetic Resources Management
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    ncbi.nlm.nih.gov/pmc/articles/PMC10377871/
  71. Jul 2023
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
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    ncbi.nlm.nih.gov/pmc/articles/PMC10360393/
  73. Jun 2023
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Identification of transcriptional regulatory variants in pig duodenum, liver, and muscle tissues
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    ncbi.nlm.nih.gov/pmc/articles/PMC10290502/
  75. May 2023
  76. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Novel variants underlying autosomal recessive neurodevelopmental disorders with intellectual disability in Iranian consanguineous families
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    onlinelibrary.wiley.com/doi/full/10.1002/jcla.24241
  77. Apr 2023
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structurally Complex Osteosarcoma Genomes Exhibit Limited Heterogeneity within Individual Tumors and across Evolutionary Time
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    ncbi.nlm.nih.gov/pmc/articles/PMC10093779/
  79. Mar 2023
  80. europepmc.org europepmc.org
    Metagenomic analysis of coastal Kenya female Aedes aegypti mosquito ...
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    europepmc.org/article/ppr/ppr634883
  81. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  82. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693781/
  86. Feb 2023
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Expansion and loss of sperm nuclear basic protein genes in Drosophila correspond with genetic conflicts between sex chromosomes
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    ncbi.nlm.nih.gov/pmc/articles/PMC9917458/
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A molecular phenotypic map of malignant pleural mesothelioma
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    ncbi.nlm.nih.gov/pmc/articles/PMC9881451/
  89. Jan 2023
  90. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome Reporting for Healthy Populations—Pipeline for Genomic Screening from the GENCOV COVID‐19 Study
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    ncbi.nlm.nih.gov/pmc/articles/PMC9874607/
  91. Dec 2022
  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
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    ncbi.nlm.nih.gov/pmc/articles/PMC9795480/
  93. www.sciencedirect.com www.sciencedirect.com
    Protocol to analyze population structure and migration history based on human genome variation data
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    sciencedirect.com/science/article/pii/S2666166722008085
  94. Nov 2022
  95. www.sciencedirect.com www.sciencedirect.com
    A single-cell transcriptome atlas of glial diversity in the human hippocampus across the postnatal lifespan
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    sciencedirect.com/science/article/pii/S1934590922004180
  96. Oct 2022
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population
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    ncbi.nlm.nih.gov/pmc/articles/PMC9553416/
  98. Aug 2022
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The evolution of a counter-defense mechanism in a virus constrains its host range
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    ncbi.nlm.nih.gov/pmc/articles/PMC9391042/
  100. Jul 2022
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  102. Jun 2022
  103. www.nature.com www.nature.com
    The first long-read nuclear genome assembly of Oryza australiensis, a wild rice from northern Australia
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    nature.com/articles/s41598-022-14893-5
  104. aacrjournals.org aacrjournals.org
    Quantification of neoantigen-mediated immunoediting in cancer evolution
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    aacrjournals.org/cancerres/article/82/12/2226/699353/Quantification-of-Neoantigen-Mediated
  105. May 2022
  106. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
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    f1000research.com/articles/11-530
  107. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
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    gigabytejournal.com/articles/51
  108. Mar 2022
  109. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater
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    ncbi.nlm.nih.gov/pmc/articles/PMC8963300/
  110. link.springer.com link.springer.com
    GWAS in people of Middle Eastern descent reveals a locus protective of kidney function—a cross-sectional study
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    link.springer.com/article/10.1186/s12916-022-02267-7
  111. Feb 2022
  112. academic.oup.com academic.oup.com
    An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab096/6521876
  113. Nov 2021
  114. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A sex-specific evolutionary interaction between ADCY9 and CETP
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    ncbi.nlm.nih.gov/pmc/articles/PMC8594919/
  115. Aug 2021
  116. www.sciencedirect.com www.sciencedirect.com
    Proneural genes define ground-state rules to regulate neurogenic patterning and cortical folding
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    sciencedirect.com/science/article/pii/S0896627321005067
  117. www.sciencedirect.com www.sciencedirect.com
    Enhancer RNA m6A methylation facilitates transcriptional condensate formation and gene activation
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    sciencedirect.com/science/article/pii/S1097276521005931
  118. academic.oup.com academic.oup.com
    Untitled document
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    academic.oup.com/gigascience/article/7/12/giy141/5202467
  119. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6175580/
  120. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6304105/
  121. www.sciencedirect.com www.sciencedirect.com
    Untitled document
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    sciencedirect.com/science/article/pii/S0960982218315549
  122. Jul 2021
  123. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC5595439/
  124. May 2021
  125. www.sciencedirect.com www.sciencedirect.com
    Transcriptional Programs of Circuit Assembly in the Drosophila Visual System
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    sciencedirect.com/science/article/pii/S0896627320307741
  126. www.sciencedirect.com www.sciencedirect.com
    POLE Mutation Spectra Are Shaped by the Mutant Allele Identity, Its Abundance, and Mismatch Repair Status
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    sciencedirect.com/science/article/pii/S1097276520303130
  127. onlinelibrary.wiley.com onlinelibrary.wiley.com
    How to characterize a strain? Clonal heterogeneity in industrial Saccharomyces influences both phenotypes and heterogeneity in phenotypes
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    onlinelibrary.wiley.com/doi/10.1002/yea.3562
  128. www.sciencedirect.com www.sciencedirect.com
    Whole-genome analysis of giraffe supports four distinct species
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  129. Apr 2021
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    A common 1.6 mb Y-chromosomal inversion predisposes to subsequent deletions and severe spermatogenic failure in humans
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  131. Mar 2021
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    New Insights Into Mitochondrial DNA Reconstruction and Variant Detection in Ancient Samples
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  133. Sep 2020
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    Investigating Human Mitochondrial Genomes in Single Cells
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    mdpi.com/2073-4425/11/5/534
  135. Jan 2020
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    A Patient-Derived Glioblastoma Organoid Model and Biobank Recapitulates Inter- and Intra-tumoral Heterogeneity
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  137. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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    academic.oup.com/gigascience/article/8/7/giz085/5532406
  138. Nov 2017
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    Cell differentiation defines acute and chronic infection cell types in Staphylococcus aureus
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    An expanded mammal mitogenome dataset from Southeast Asia
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    academic.oup.com/gigascience/article/6/8/1/3958782/An-expanded-mammal-mitogenome-dataset-from