39 Matching Annotations
  1. Mar 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multi-omic dataset of patient-derived tumor organoids of neuroendocrine neoplasms
    1
    1. scibot 09 Mar 2024
      RRID:SCR_005275

      DOI: 10.1093/gigascience/giae008

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    ncbi.nlm.nih.gov/pmc/articles/PMC10919335/
  3. Oct 2023
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    nf-core/clipseq - a robust Nextflow pipeline for comprehensive CLIP data analysis
    1
    1. scibot 14 Oct 2023
      RRID:SCR_005275

      DOI: 10.12688/wellcomeopenres.19453.1

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    ncbi.nlm.nih.gov/pmc/articles/PMC10565428/
  5. Aug 2023
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tomatidine targets ATF4-dependent signaling and induces ferroptosis to limit pancreatic cancer progression
    1
    1. scibot 10 Aug 2023
      RRID:SCR_005275

      DOI: 10.1016/j.isci.2023.107408

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    ncbi.nlm.nih.gov/pmc/articles/PMC10405072/
  7. Jul 2023
  8. www.sciencedirect.com www.sciencedirect.com
    Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition
    1
    1. scibot 22 Jul 2023
      RRID:SCR_005275

      DOI: 10.1016/j.neuron.2023.06.019

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    sciencedirect.com/science/article/pii/S0896627323004786
  9. Jun 2023
  10. link.springer.com link.springer.com
    Integrated clinical genomic analysis reveals xenobiotic metabolic genes are downregulated in meningiomas of current smokers
    1
    1. scibot 24 Jun 2023
      RRID:SCR_005275

      DOI: 10.1007/s11060-023-04359-7

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    link.springer.com/article/10.1007/s11060-023-04359-7
  11. Mar 2023
  12. www.nature.com www.nature.com
    HOXB3 drives WNT-activation associated progression in castration-resistant prostate cancer
    1
    1. scibot 29 Mar 2023
      RRID:SCR_005275

      DOI: 10.1038/s41419-023-05742-y

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    nature.com/articles/s41419-023-05742-y
  13. www.sciencedirect.com www.sciencedirect.com
    A cell-type-specific alternative splicing regulator shapes synapse properties in a trans-synaptic manner
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005275

      DOI: 10.1016/j.celrep.2023.112173

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    sciencedirect.com/science/article/pii/S2211124723001845
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Skeletal dysplasia-causing TRPV4 mutations suppress the hypertrophic differentiation of human iPSC-derived chondrocytes
    1
    1. scibot 02 Mar 2023
      RRID:SCR_005275

      DOI: 10.7554/eLife.71154

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    ncbi.nlm.nih.gov/pmc/articles/PMC9949800/
  15. Feb 2023
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A molecular phenotypic map of malignant pleural mesothelioma
    1
    1. scibot 02 Feb 2023
      RRID:SCR_005275

      DOI: 10.1093/gigascience/giac128

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    ncbi.nlm.nih.gov/pmc/articles/PMC9881451/
  17. Oct 2022
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAG2 expression is associated with adverse survival outcomes and regulates cell phenotype in muscle-invasive bladder cancer
    1
    1. scibot 26 Oct 2022
      RRID:SCR_005275

      DOI: 10.1158/2767-9764.crc-22-0155

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    ncbi.nlm.nih.gov/pmc/articles/PMC9583756/
  19. Sep 2022
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterization of cellular senescence in aging skeletal muscle
    1
    1. scibot 23 Sep 2022
      RRID:SCR_005275

      DOI: 10.1038/s43587-022-00250-8

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    ncbi.nlm.nih.gov/pmc/articles/PMC9491365/
  21. Jun 2022
  22. aacrjournals.org aacrjournals.org
    Predictive markers of response to neoadjuvant durvalumab with nab-paclitaxel and dose dense doxorubicin/cyclophosphamide in basal-like triple negative breast cancer
    1
    1. scibot 14 Jun 2022
      RRID:SCR_005275

      DOI: 10.1158/1078-0432.CCR-21-3215

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    aacrjournals.org/clincancerres/article/28/12/2587/699273/Predictive-Markers-of-Response-to-Neoadjuvant
  23. www.nature.com www.nature.com
    Ptpn1 deletion protects oval cells against lipoapoptosis by favoring lipid droplet formation and dynamics
    1
    1. scibot 14 Jun 2022
      RRID:SCR_005275

      DOI: 10.1038/s41418-022-01023-x

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    nature.com/articles/s41418-022-01023-x
  24. Apr 2022
  25. aacrjournals.org aacrjournals.org
    FREQUENCY AND GENOMIC ASPECTS OF INTRINSIC RESISTANCE TO VISMODEGIB IN LOCALLY ADVANCED BASAL CELL CARCINOMA
    1
    1. scibot 05 Apr 2022
      RRID:SCR_005275

      DOI: 10.1158/1078-0432.CCR-21-3764

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    aacrjournals.org/clincancerres/article/28/7/1422/682219/Frequency-and-Genomic-Aspects-of-Intrinsic
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cancer cells retrace a stepwise differentiation program during malignant progression
    1
    1. scibot 02 Apr 2022
      RRID:SCR_005275

      DOI: 10.1158/2159-8290.CD-20-1637

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    ncbi.nlm.nih.gov/pmc/articles/PMC7611766/
  27. Mar 2022
  28. www.science.org www.science.org
    Multiple approaches converge on three biological subtypes of meningioma and extract new insights from published studies
    1
    1. scibot 05 Mar 2022
      RRID:SCR_005275

      DOI: 10.1126/sciadv.abm6247

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    science.org/doi/abs/10.1126/sciadv.abm6247
  29. Feb 2022
  30. elifesciences.org elifesciences.org
    FMRP regulates mRNAs encoding distinct functions in the cell body and dendrites of CA1 pyramidal neurons
    1
    1. scibot 16 Feb 2022
      RRID:SCR_005275

      DOI: 10.7554/eLife.71892

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    elifesciences.org/articles/71892
  31. Jan 2022
  32. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    Modulation of the Human Pancreatic Ductal Adenocarcinoma Immune Microenvironment by Stereotactic Body Radiotherapy
    1
    1. scibot 29 Jan 2022
      RRID:SCR_005275

      DOI: 10.1158/1078-0432.CCR-21-2495

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    clincancerres.aacrjournals.org/content/28/1/150
  33. www.sciencedirect.com www.sciencedirect.com
    scDART-seq reveals distinct m6A signatures and mRNA methylation heterogeneity in single cells
    1
    1. scibot 29 Jan 2022
      RRID:SCR_005275

      DOI: 10.1016/j.molcel.2021.12.038

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    sciencedirect.com/science/article/pii/S1097276521011436
  34. Aug 2021
  35. link.springer.com link.springer.com
    BRB-seq: ultra-affordable high-throughput transcriptomics enabled by bulk RNA barcoding and sequencing
    1
    1. scibot 13 Aug 2021
      RRID:SCR_005275

      DOI: 10.1186/s13059-019-1671-x

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    link.springer.com/article/10.1186/s13059-019-1671-x
  36. www.eneuro.org www.eneuro.org
    Untitled document
    1
    1. scibot 11 Aug 2021
      RRID:SCR_005275

      DOI: 10.1523/ENEURO.0320-18.2018

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    eneuro.org/content/5/6/ENEURO.0320-18.2018
  37. www.nature.com www.nature.com
    Untitled document
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    1. scibot 06 Aug 2021
      RRID:SCR_005275

      DOI: 10.1038/s41586-018-0845-0

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    nature.com/articles/s41586-018-0845-0 
  38. Jul 2021
  39. link.springer.com link.springer.com
    Cold-induced lipid dynamics and transcriptional programs in white adipose tissue
    1
    1. scibot 30 Jul 2021
      RSeQC

      DOI: 10.1186/s12915-019-0693-x

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    link.springer.com/article/10.1186/s12915-019-0693-x
  40. elifesciences.org elifesciences.org
    RbFox1 up-regulation impairs BDNF-dependent hippocampal LTP by dysregulating TrkB isoform expression levels
    1
    1. scibot 29 Jul 2021
      RSeQC

      DOI: 10.7554/eLife.49673

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    elifesciences.org/articles/49673
  41. Nov 2020
  42. www.sciencedirect.com www.sciencedirect.com
    Ablation of Fat Cells in Adult Mice Induces Massive Bone Gain
    1
    1. scibot 20 Nov 2020
      RRID:SCR_005275

      DOI: 10.1016/j.cmet.2020.09.011

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    sciencedirect.com/science/article/pii/S1550413120304897
  43. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    A molecular map of lung neuroendocrine neoplasms
    1
    1. scibot 03 Nov 2020
      SCR_005275

      DOI: 10.1093/gigascience/giaa112

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    pubmed.ncbi.nlm.nih.gov/33124659/
  44. Sep 2020
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Endogenous itaconate is not required for particulate matter-induced NRF2 expression or inflammatory response
    1
    1. scibot 23 Sep 2020
      RRID:SCR_005275

      DOI: 10.7554/eLife.54877

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    ncbi.nlm.nih.gov/pmc/articles/PMC7185992/
  46. elifesciences.org elifesciences.org
    Transposase-assisted tagmentation of RNA/DNA hybrid duplexes
    1
    1. scibot 08 Sep 2020
      RRID:SCR_005275

      DOI: 10.7554/eLife.54919

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    elifesciences.org/articles/54919
  47. Jan 2020
  48. elifesciences.org elifesciences.org
    FMRP has a cell-type-specific role in CA1 pyramidal neurons to regulate autism-related transcripts and circadian memory
    1
    1. scibot 13 Jan 2020
      RRID:SCR_005275

      DOI: 10.7554/eLife.46919

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    elifesciences.org/articles/46919
  49. www.sciencedirect.com www.sciencedirect.com
    Untitled document
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    1. scibot 13 Jan 2020
      RRID:SCR_005275

      DOI: 10.1016/j.immuni.2018.12.021

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      Curator: @ethanbadger

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    sciencedirect.com/science/article/pii/S1074761318305697
  50. genomebiology.biomedcentral.com genomebiology.biomedcentral.com
    Untitled document
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    1. scibot 13 Jan 2020
      RRID:SCR_005275

      DOI: 10.1186/s13059-019-1671-x

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    genomebiology.biomedcentral.com/articles/10.1186/s13059-019-1671-x
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 13 Jan 2020
      RRID:SCR_005275

      DOI: 10.7554/eLife.41913

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    ncbi.nlm.nih.gov/pmc/articles/PMC6336405/
  52. www.nature.com www.nature.com
    Untitled document
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    1. scibot 13 Jan 2020
      RRID:SCR_005275

      DOI: 10.1038/s41586-018-0845-0

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    nature.com/articles/s41586-018-0845-0
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 13 Jan 2020
      RRID:SCR_005275

      DOI: 10.1523/ENEURO.0320-18.2018

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    ncbi.nlm.nih.gov/pmc/articles/PMC6361723/
  54. Nov 2018
  55. www.sciencedirect.com www.sciencedirect.com
    Zc3h13 Regulates Nuclear RNA m6A Methylation and Mouse Embryonic Stem Cell Self-Renewal
    1
    1. scibot 05 Nov 2018
      RSeQC

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1097276518301345
  56. www.sciencedirect.com www.sciencedirect.com
    PNPT1 Release from Mitochondria during Apoptosis Triggers Decay of Poly(A) RNAs
    1
    1. scibot 05 Nov 2018
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    sciencedirect.com/science/article/pii/S0092867418305105
  57. europepmc.org europepmc.org
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    1. scibot 05 Nov 2018
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    europepmc.org/articles/PMC5608512/
  58. Nov 2017
  59. www.sciencedirect.com www.sciencedirect.com
    An Orchestrated Intron Retention Program in Meiosis Controls Timely Usage of Transcripts during Germ Cell Differentiation
    1
    1. scibot 08 Nov 2017
      Rseqc V2.3.9

      Curator: @Zeljana_Babic

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    sciencedirect.com/science/article/pii/S1534580717301247
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial respiratory gene expression is suppressed in many cancers
    1
    1. scibot 08 Nov 2017
      RseQC

      Curator: @Zeljana_Babic

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    ncbi.nlm.nih.gov/pmc/articles/PMC5243113/