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  3. Dec 2025
  4. www.sciencedirect.com:5037 www.sciencedirect.com:5037
    Dual role of Oct4 and Sox2 in controlling the developmental capacity and timing of tissue morphogenesis in the embryonic lineage
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    sciencedirect.com:5037/science/article/pii/S1534580725006951
  5. Nov 2025
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    Parent-of-origin effects orchestrate transcriptional reprogramming and epigenetic regulation of seedling vigor heterosis in triploid loquat
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    pmc.ncbi.nlm.nih.gov/articles/PMC12580266/
  7. Oct 2025
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    Chromosome-specific epigenetic control and transmission of ribosomal DNA arrays in Hominidae genomes
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  9. May 2025
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    DNA methyltransferase 1 modulates mitochondrial function through bridging m5C RNA methylation
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  11. Apr 2025
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    Non-invasive multi-cancer detection using DNA hypomethylation of LINE-1 retrotransposons
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  13. Feb 2025
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  15. Jan 2025
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    Increased local DNA methylation disorder in AMLs with DNMT3A-destabilizing variants and its clinical implication
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  17. Jul 2024
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    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
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  19. Jun 2024
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    Impacts of in-vitro zebularine treatment on genome-wide DNA methylation and transcriptomic profiles in Salix purpurea L.
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    Individual longitudinal changes in DNA-methylome identify signatures of early-life adversity and correlate with later outcome.
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    sciencedirect.com/science/article/pii/S2352289524000481
  22. May 2024
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    MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons
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  24. Feb 2024
  25. www.biorxiv.org www.biorxiv.org
    Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome
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    biorxiv.org/content/10.1101/2023.12.16.571594v1
  26. Jan 2024
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    Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome
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  28. Dec 2023
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    OvaPrintâ„¢ - a cell-free DNA methylation liquid biopsy for the risk assessment of high-grade serous ovarian cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC10722131/
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  31. Nov 2023
  32. academic.oup.com academic.oup.com
    epialleleR: an R/Bioconductor package for sensitive allele-specific methylation analysis in NGS data
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad087/7334271
  33. Oct 2023
  34. www.nature.com www.nature.com
    TET2 lesions enhance the aggressiveness of CEBPA-mutant acute myeloid leukemia by rebalancing GATA2 expression
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    nature.com/articles/s41467-023-41927-x
  35. Sep 2023
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    Perturbations in 3D genome organization can promote acquired drug resistance
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  38. Aug 2023
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    Evaluation of cytosine conversion methods for whole-genome DNA methylation profiling
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  40. Jun 2023
  41. aacrjournals.org aacrjournals.org
    Comprehensive DNA methylation analysis indicates that pancreatic intraepithelial neoplasia lesions are acinar-derived and epigenetically primed for carcinogenesis
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    aacrjournals.org/cancerres/article/83/11/1905/726442/Comprehensive-DNA-Methylation-Analysis-Indicates
  42. May 2023
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    DNA methylation changes underlie the long-term association between periodontitis and atherosclerotic cardiovascular disease
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  44. Jan 2023
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cancer stem cells, not bulk tumor cells, determine mechanisms of resistance to SMO inhibitors
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  46. Nov 2022
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FOXR2 is an epigenetically regulated pan-cancer oncogene that activates ETS transcriptional circuits
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  48. Oct 2022
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multiomic characterization and drug testing establish circulating tumor cells as an ex vivo tool for personalized medicine
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    Human PSCs determine the competency of cerebral organoid differentiation via FGF signaling and epigenetic mechanisms
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  52. Sep 2022
  53. aacrjournals.org aacrjournals.org
    PU.1-dependent enhancer inhibition separates Tet2-deficient hematopoiesis from malignant transformation
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  54. Jun 2022
  55. aacrjournals.org aacrjournals.org
    Cancer Stem Cells, not Bulk Tumor Cells, Determine Mechanisms of Resistance to SMO Inhibitors
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  56. Apr 2022
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Presence of H3K4me3 on Paternally Expressed Genes of the Paternal Genome From Sperm to Implantation
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  58. Mar 2022
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    Single nucleus multi-omics identifies human cortical cell regulatory genome diversity
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    Distribution and regulatory roles of oxidized 5-methylcytosines in DNA and RNA of the basidiomycete fungi Laccaria bicolor and Coprinopsis cinerea
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    ncbi.nlm.nih.gov/pmc/articles/PMC8889193/
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    Discovery of candidate DNA methylation cancer driver genes
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    ncbi.nlm.nih.gov/pmc/articles/PMC8419066/
  62. Feb 2022
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    When left does not seem right: epigenetic and bioelectric differences between left- and right-sided breast cancer
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    link.springer.com/article/10.1186/s10020-022-00440-5
  64. Sep 2021
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    Multi-platform profiling characterizes molecular subgroups and resistance networks in chronic lymphocytic leukemia
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  66. Aug 2021
  67. www.sciencedirect.com www.sciencedirect.com
    Lymphocyte-Specific Chromatin Accessibility Pre-determines Glucocorticoid Resistance in Acute Lymphoblastic Leukemia
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    sciencedirect.com/science/article/pii/S1535610818305233
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    ncbi.nlm.nih.govhttp://europepmc.org/articles/PMC6070528/
  69. Jul 2021
  70. elifesciences.org elifesciences.org
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    Targeting CDK9 Reactivates Epigenetically Silenced Genes in Cancer
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    Histone H3K9 Methyltransferase G9a in Oocytes Is Essential for Preimplantation Development but Dispensable for CG Methylation Protection
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    Widespread Enhancer Dememorization and Promoter Priming during Parental-to-Zygotic Transition
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    N6-methyladenine DNA Modification in Glioblastoma
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  76. Jun 2021
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    Probing the signaling requirements for naive human pluripotency by high-throughput chemical screening
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  78. May 2021
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    Comparison of Global DNA Methylation Patterns in Human Melanoma Tissues and Their Derivative Cell Lines
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  80. Oct 2020
  81. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Cord blood DNA methylome in newborns later diagnosed with autism spectrum disorder reflects early dysregulation of neurodevelopmental and X-linked genes
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  82. Sep 2020
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    Regulatory Dynamics of Tet1 and Oct4 Resolve Stages of Global DNA Demethylation and Transcriptomic Changes in Reprogramming
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  84. Jan 2020
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    Identification and Analyses of Extra-Cranial and Cranial Rhabdoid Tumor Molecular Subgroups Reveal Tumors with Cytotoxic T Cell Infiltration
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    TET2 Regulates the Neuroinflammatory Response in Microglia
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    A Unique Epigenomic Landscape Defines Human Erythropoiesis
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  91. Nov 2018
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    Transcription Elongation Can Affect Genome 3D Structure
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    Arabidopsis Serrate Coordinates Histone Methyltransferases ATXR5/6 and RNA Processing Factor RDR6 to Regulate Transposon Expression
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    Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and plasticity
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    ncbi.nlm.nih.gov/pmc/articles/PMC5906096/
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    Maser: one-stop platform for NGS big data from analysis to visualization
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    academic.oup.com/database/article/doi/10.1093/database/bay027/4970007
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    Integration of human pancreatic islet genomic data refines regulatory mechanisms at Type 2 Diabetes susceptibility loci
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  98. Nov 2017
  99. www.sciencedirect.com www.sciencedirect.com
    The Role of N-α-acetyltransferase 10 Protein in DNA Methylation and Genomic Imprinting
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    Simultaneous measurement of chromatin accessibility, DNA methylation, and nucleosome phasing in single cells
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    Mice deficient of Myc super-enhancer region reveal differential control mechanism between normal and pathological growth
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    ncbi.nlm.nih.gov/pmc/articles/PMC5461110/
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    Using DNA Methylation Profiling to Evaluate Biological Age and Longevity Interventions
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    Single-Cell 5-Formylcytosine Landscapes of Mammalian Early Embryos and ESCs at Single-Base Resolution
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    Epigenetic regulation of lateralized fetal spinal gene expression underlies hemispheric asymmetries
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    elifesciences.org/articles/22784
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    A Biobank of Breast Cancer Explants with Preserved Intra-tumor Heterogeneity to Screen Anticancer Compounds
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    sciencedirect.com/science/article/pii/S0092867416311382