114 Matching Annotations
  1. Aug 2025
  2. www.science.org www.science.org
    Histone acetylation readers Bdf1 and Yaf9 direct SWR1 remodeler to +1 nucleosome
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    science.org/doi/10.1126/sciadv.adt2002
  3. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Histone acetylation readers Bdf1 and Yaf9 direct SWR1 remodeler to +1 nucleosome
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    pmc.ncbi.nlm.nih.gov/articles/PMC12327448/
  4. Jul 2025
  5. 52.53.155.43 52.53.155.43
    nuthikattu-et-al-2025-sex-differences-in-the-single-nuclei-hippocampal-neurovascular-unit-transcriptomic-response-to-html.html
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    52.53.155.43/47f204aba37c20518f517c21ca2f7903d6e1bec5/nuthikattu-et-al-2025-sex-differences-in-the-single-nuclei-hippocampal-neurovascular-unit-transcriptomic-response-to-html.html
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    Variation in phenotype, genotype, and somatic diversity among asexual Schmidtea mediterranea planarians
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    sciencedirect.com/science/article/pii/S2589004225012969
  7. www.biorxiv.org www.biorxiv.org
    Parkinson’s disease microglia induce endogenous α-synuclein pathology in patient-specific midbrain organoids
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    biorxiv.org/content/10.1101/2025.07.01.662685v1
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    EphB2-mediated ephrin-B reverse signaling on microglia drives an anti-viral, but inflammatory and neurotoxic response associated with HIV
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    pmc.ncbi.nlm.nih.gov/articles/PMC12211399/
  9. Jun 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Evidence of SARS-CoV-2 bacteriophage potential in human gut microbiota
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    pmc.ncbi.nlm.nih.gov/articles/PMC12120431/
  11. May 2025
  12. www.sciencedirect.com www.sciencedirect.com
    DNA methyltransferase 1 modulates mitochondrial function through bridging m5C RNA methylation
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    sciencedirect.com/science/article/pii/S1097276525003612
  13. Apr 2025
  14. 52.53.155.43 52.53.155.43
    snRNA-seq analysis of the moss Physcomitrium patens reveals a conserved cytokinin-ESR module promoting pluripotent stem cell identity
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    52.53.155.43/ebea56b5c57b47d3ed306774161acf71df19a431/2024.07.31.606100.full-html.html
  15. www.sciencedirect.com www.sciencedirect.com
    Quiescent cell re-entry is limited by macroautophagy-induced lysosomal damage
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    sciencedirect.com/science/article/pii/S009286742500282X
  16. www.sciencedirect.com www.sciencedirect.com
    A Systemic Immunoinformatics Approach to Design Combinatorial Multiepitope Vaccine Candidates against Vector-borne Bacterial Infections Exploiting the Proteomes of the Causative Agent and Vector for Scrub typhus
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    sciencedirect.com/science/article/pii/S2950194625000925
  17. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Targeting the dendritic cell-secreted immunoregulatory cytokine CCL22 alleviates radioresistance
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    pmc.ncbi.nlm.nih.gov/articles/PMC11444901/
  18. Mar 2025
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Translatome analysis reveals cellular network in DLK-dependent hippocampal glutamatergic neuron degeneration
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    pmc.ncbi.nlm.nih.gov/articles/PMC11896613/
  20. Feb 2025
  21. www.sciencedirect.com www.sciencedirect.com
    RBM43 controls PGC1α translation and a PGC1α-STING signaling axis
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    sciencedirect.com/science/article/pii/S1550413125000130
  22. Nov 2024
  23. 52.53.155.43 52.53.155.43
    Molecular basis of global promoter sensing and nucleosome capture by the SWR1 chromatin remodeler
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    52.53.155.43/81c2471a16469e31311fc23237dcd10bcf01c26f/PIIS0092867424010250-html.html
  24. Oct 2024
  25. aacrjournals.org aacrjournals.org
    Gut Microbiota–Derived Short-Chain Fatty Acids Promote Prostate Cancer Growth via IGF1 Signaling
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    aacrjournals.org/cancerres/article/81/15/4014/670252/Gut-Microbiota-Derived-Short-Chain-Fatty-Acids
  26. 52.53.155.43 52.53.155.43
    Molecular basis of global promoter sensing and nucleosome capture by the SWR1 chromatin remodeler
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    52.53.155.43/81c2471a16469e31311fc23237dcd10bcf01c26f/PIIS0092867424010250-html.html
  27. Sep 2024
  28. bpspubs.onlinelibrary.wiley.com bpspubs.onlinelibrary.wiley.com
    BPS Publications
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    bpspubs.onlinelibrary.wiley.com/doi/10.1111/bph.15226
  29. www.sciencedirect.com www.sciencedirect.com
    Inhibitory co-receptor Lag3 supports Foxp3+ regulatory T cell function by restraining Myc-dependent metabolic programming
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    sciencedirect.com/science/article/pii/S1074761324004072
  30. Aug 2024
  31. www.sciencedirect.com www.sciencedirect.com
    Intra-patient spatial comparison of non-metastatic and metastatic lymph nodes reveals a reduction in CD169+ macrophages within metastatic breast cancers
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    sciencedirect.com/science/article/pii/S2352396424003074
  32. Jul 2024
  33. www.cell.com www.cell.com
    Innate immune training restores pro-reparative myeloid functions to promote remyelination in the aged central nervous system
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    cell.com/immunity/fulltext/S1074-7613(24)00348-0
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    ALDH1A3-acetaldehyde metabolism potentiates transcriptional heterogeneity in melanoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC11290356/
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Rapid Dynamics of Signal-Dependent Transcriptional Repression by Capicua
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    ncbi.nlm.nih.gov/pmc/articles/PMC7161736/
  36. onlinelibrary.wiley.com onlinelibrary.wiley.com
    ABC Efflux Transporters and Solute Carriers in the Early Developing Brain of a Marsupial Monodelphis domestica (South American Gray Short-Tailed Opossum)
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    onlinelibrary.wiley.com/doi/full/10.1002/cne.25655
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome evolution and transcriptome plasticity is associated with adaptation to monocot and dicot plants in Colletotrichum fungi
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    ncbi.nlm.nih.gov/pmc/articles/PMC11212070/
  38. May 2024
  39. www.biorxiv.org www.biorxiv.org
    Designing Combinatorial Multiepitope Vaccine Candidates against Scrub Typus by a Proteome-wide Immunoinfomatics Approach
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    biorxiv.org/content/10.1101/2024.03.05.583536v1
  40. Mar 2024
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular Property Diagnostic Suite for COVID-19 (MPDSCOVID-19): an open-source disease-specific drug discovery portal
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    ncbi.nlm.nih.gov/pmc/articles/PMC10958779/
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex and age affect depot expression of Ca2+ channels in rat white fat adipocytes
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    ncbi.nlm.nih.gov/pmc/articles/PMC10959010/
  43. Feb 2024
  44. genomebiology.biomedcentral.com genomebiology.biomedcentral.com
    The androgen receptor interacts with GATA3 to transcriptionally regulate a luminal epithelial cell phenotype in breast cancer
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    genomebiology.biomedcentral.com/articles/10.1186/s13059-023-03161-y
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    FAIR data retrieval for sensitive clinical research data in Galaxy
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    ncbi.nlm.nih.gov/pmc/articles/PMC10821763/
  46. Jan 2024
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Systems-level analyses dissociate genetic regulators of reactive oxygen species and energy production
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    ncbi.nlm.nih.gov/pmc/articles/PMC10801874/
  48. Dec 2023
  49. www.sciencedirect.com www.sciencedirect.com
    Collisions of RNA polymerases behind the replication fork promote alternative RNA splicing in newly replicated chromatin
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    sciencedirect.com/science/article/pii/S1097276523010122
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterization of nucleolar SUMO isopeptidases unveils a general p53-independent checkpoint of impaired ribosome biogenesis
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    ncbi.nlm.nih.gov/pmc/articles/PMC10709353/
  51. Nov 2023
  52. www.nature.com www.nature.com
    Selective inhibition of CDK9 in triple negative breast cancer
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    nature.com/articles/s41388-023-02892-3
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Precision Medicine and Complex Disease: Blood pressure and the kidney cortex transcriptome response to high-sodium diet challenge in female nonhuman primates
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    ncbi.nlm.nih.gov/pmc/articles/PMC9639778/
  54. Oct 2023
  55. www.biorxiv.org www.biorxiv.org
    Systems-level analyses dissociate genetic regulators of reactive oxygen species and energy production
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    biorxiv.org/content/10.1101/2023.10.14.562276v1
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Targeting MALAT1 Augments Sensitivity to PARP Inhibition by Impairing Homologous Recombination in Prostate Cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC10561629/
  57. www.sciencedirect.com www.sciencedirect.com
    Prenatal alcohol alters inflammatory signatures in enteric portal tissues following adult-onset cerebrovascular ischemic stroke
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    sciencedirect.com/science/article/pii/S2589004223019971
  58. Sep 2023
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Thermophilic methane oxidation is widespread in Aotearoa-New Zealand geothermal fields
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    ncbi.nlm.nih.gov/pmc/articles/PMC10502179/
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Imprinted Dlk1 dosage as a size determinant of the mammalian pituitary gland
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    ncbi.nlm.nih.gov/pmc/articles/PMC10468206/
  61. Aug 2023
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Dual Targeting of Apoptotic and Signaling Pathways in T-Lineage Acute Lymphoblastic Leukemia
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    ncbi.nlm.nih.gov/pmc/articles/PMC10425730/
  63. Jul 2023
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Salmonella gallinarum strains from outbreaks of fowl typhoid fever in Southern Africa closely related to SG9R vaccines
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    ncbi.nlm.nih.gov/pmc/articles/PMC10354334/
  65. www.sciencedirect.com www.sciencedirect.com
    Metabolic regulation of CTCF expression and chromatin association dictates starvation response in mice and flies
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    sciencedirect.com/science/article/pii/S2589004223012051
  66. Jun 2023
  67. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Discovery of two novel tilapia lake virus-like virus isolates in the transcriptomic data of guppy fish (Poecilia reticulata)
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    onlinelibrary.wiley.com/doi/10.1111/jfd.13823
  68. May 2023
  69. 52.53.155.43 52.53.155.43
    bqad083-html.html
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    52.53.155.43/c24202ba5c1e462601cd87eadcb0082575e1cb0e/bqad083-html.html
  70. www.sciencedirect.com www.sciencedirect.com
    Mbnl2 loss alters novel context processing and impairs object recognition memory
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    sciencedirect.com/science/article/pii/S258900422300809X
  71. Apr 2023
  72. www.sciencedirect.com www.sciencedirect.com
    Protocol for mapping double-stranded DNA break sites across the genome with translocation capture sequencing
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    sciencedirect.com/science/article/pii/S2666166723001636
  73. Mar 2023
  74. www.sciencedirect.com www.sciencedirect.com
    A central chaperone-like role for 14-3-3 proteins in human cells
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    sciencedirect.com/science/article/pii/S1097276523001211
  75. Jan 2023
  76. 52.53.155.43 52.53.155.43
    An integrated SAGA and TFIID PIC assembly pathway selective for poised and induced promoters.
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    52.53.155.43/559289c6916b0e2685cb28267e4160aeae97af13/Genes Dev.-2022-Mittal-985-1001-html.html
  77. Oct 2022
  78. www.sciencedirect.com www.sciencedirect.com
    An anti-inflammatory transcriptional cascade conserved from flies to humans
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    sciencedirect.com/science/article/pii/S2211124722013560
  79. Sep 2022
  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAG2 promotes the myelination transcriptional program in oligodendrocytes
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    ncbi.nlm.nih.gov/pmc/articles/PMC9439679/
  81. www.sciencedirect.com www.sciencedirect.com
    Convergent cerebrospinal fluid proteomes and metabolic ontologies in humans and animal models of Rett syndrome
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    sciencedirect.com/science/article/pii/S258900422201238X
  82. Apr 2022
  83. www.sciencedirect.com www.sciencedirect.com
    An optimized 4C-seq protocol based on cistrome and epigenome data in the mouse RAW264.7 macrophage cell line
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    sciencedirect.com/science/article/pii/S2666166722002180
  84. link.springer.com link.springer.com
    PEGR: a flexible management platform for reproducible epigenomic and genomic research
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    link.springer.com/article/10.1186/s13059-022-02671-5
  85. Jan 2022
  86. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    AP-2α Regulates S-phase and is a Marker for Sensitivity to PI3K-inhibitor Buparlisib in Colon Cancer
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    ncbi.nlm.nih.gov/pmc/articles/PMC8254761/
  87. Dec 2021
  88. www.sciencedirect.com www.sciencedirect.com
    Altered H3 histone acetylation impairs high-fidelity DNA repair to promote cerebellar degeneration in spinocerebellar ataxia type 7
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    sciencedirect.com/science/article/pii/S2211124721015485
  89. Oct 2021
  90. www.sciencedirect.com www.sciencedirect.com
    Spt4 facilitates the movement of RNA polymerase II through the +2 nucleosomal barrier
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    sciencedirect.com/science/article/pii/S2211124721012092
  91. Sep 2021
  92. www.sciencedirect.com www.sciencedirect.com
    H3K4 di-methylation governs smooth muscle lineage identity and promotes vascular homeostasis by restraining plasticity
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    sciencedirect.com/science/article/pii/S1534580721006821
  93. Aug 2021
  94. www.nature.com www.nature.com
    Genome-wide and sister chromatid-resolved profiling of protein occupancy in replicated chromatin with ChOR-seq and SCAR-seq
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    nature.com/articles/s41596-021-00585-3
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gigwa v2—Extended and improved genotype investigator
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    ncbi.nlm.nih.gov/pmc/articles/PMC6511067/
  96. elifesciences.org elifesciences.org
    Evolution of reduced co-activator dependence led to target expansion of a starvation response pathway
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    elifesciences.org/articles/25157
  97. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6202308/
  98. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC5890820/
  99. elifesciences.org elifesciences.org
    Human Nup98 regulates the localization and activity of DExH/D-box helicase DHX9
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    elifesciences.org/articles/18825
  100. Jul 2021
  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6446249/
  102. www.cell.com www.cell.com
    A prion-like protein regulator of seed germination undergoes hydration-dependent phase separation
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    cell.com/cell/fulltext/S0092-8674(21)00710-8
  103. May 2021
  104. www.sciencedirect.com www.sciencedirect.com
    Non-canonical Targets of HIF1a Impair Oligodendrocyte Progenitor Cell Function
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    sciencedirect.com/science/article/pii/S193459092030494X
  105. www.sciencedirect.com www.sciencedirect.com
    SAFB2 Enables the Processing of Suboptimal Stem-Loop Structures in Clustered Primary miRNA Transcripts
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    sciencedirect.com/science/article/pii/S1097276520303129
  106. www.sciencedirect.com www.sciencedirect.com
    Group 3 Innate Lymphoid Cells Program a Distinct Subset of IL-22BP-Producing Dendritic Cells Demarcating Solitary Intestinal Lymphoid Tissues
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    sciencedirect.com/science/article/pii/S1074761320304532
  107. Apr 2021
  108. www.sciencedirect.com www.sciencedirect.com
    DNAJC9 integrates heat shock molecular chaperones into the histone chaperone network
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    sciencedirect.com/science/article/pii/S1097276521002628
  109. Mar 2021
  110. www.frontiersin.org www.frontiersin.org
    Phylogenetic Revision of the Genus Aliivibrio: Intra- and Inter-Species Variance Among Clusters Suggest a Wider Diversity of Species
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    frontiersin.org/article/10.3389/fmicb.2021.626759/full
  111. Feb 2021
  112. www.sciencedirect.com www.sciencedirect.com
    The corepressors GPS2 and SMRT control enhancer and silencer remodeling via eRNA transcription during inflammatory activation of macrophages
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    sciencedirect.com/science/article/pii/S1097276520309618
  113. link.springer.com link.springer.com
    Outbreak of Central American born Shigella sonnei in two youth camps in Belgium in the summer of 2019
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    link.springer.com/article/10.1007/s10096-021-04164-y
  114. Jan 2021
  115. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pituitary stem cells produce paracrine WNT signals to control the expansion of their descendant progenitor cells
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    ncbi.nlm.nih.gov/pmc/articles/PMC7803373/
  116. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tool recommender system in Galaxy using deep learning
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    ncbi.nlm.nih.gov/pmc/articles/PMC7786169/
  117. Dec 2020
  118. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The ribosomal RNA m5C methyltransferase NSUN-1 modulates healthspan and oogenesis in Caenorhabditis elegans
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    ncbi.nlm.nih.gov/pmc/articles/PMC7746234/
  119. Nov 2020
  120. www.sciencedirect.com www.sciencedirect.com
    Metabolic Reprogramming Induces Germinal Center B Cell Differentiation through Bcl6 Locus Remodeling
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    sciencedirect.com/science/article/pii/S221112472031322X
  121. Sep 2020
  122. academic.oup.com academic.oup.com
    Ewastools: Infinium Human Methylation BeadChip pipeline for population epigenetics integrated into Galaxy
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    academic.oup.com/gigascience/article/9/5/giaa049/5836679
  123. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Recruitment of mRNAs to P granules by condensation with intrinsically-disordered proteins
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    ncbi.nlm.nih.gov/pmc/articles/PMC7007223/
  124. www.sciencedirect.com www.sciencedirect.com
    Structure-Mediated RNA Decay by UPF1 and G3BP1
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    sciencedirect.com/science/article/pii/S1097276520300423
  125. www.embopress.org www.embopress.org
    Temporal specificity and heterogeneity of Drosophila immune cells
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    embopress.org/doi/abs/10.15252/embj.2020104486
  126. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Building the vertebrate codex using the gene breaking protein trap library
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    ncbi.nlm.nih.gov/pmc/articles/PMC7486118/
  127. elifesciences.org elifesciences.org
    Parvovirus Minute Virus of Mice Interacts with Sites of Cellular DNA Damage to Establish and Amplify its Lytic Infection
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