54 Matching Annotations
  1. Apr 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants
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    1. scibot 24 Apr 2024
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giae017

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    ncbi.nlm.nih.gov/pmc/articles/PMC11034027/
  3. www.sciencedirect.com www.sciencedirect.com
    Staphylococcus aureus skin colonization is mediated by SasG lectin variation
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    1. scibot 04 Apr 2024
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      DOI: 10.1016/j.celrep.2024.114022

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    sciencedirect.com/science/article/pii/S2211124724003504
  4. Mar 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptome-informed identification and characterisation of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genes
    1
    1. scibot 27 Mar 2024
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      DOI: 10.1016/j.isci.2024.109441

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    ncbi.nlm.nih.gov/pmc/articles/PMC10960109/
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quantitative proteome dynamics across embryogenesis in a model chordate
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    1. scibot 22 Mar 2024
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      DOI: 10.1016/j.isci.2024.109355

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    ncbi.nlm.nih.gov/pmc/articles/PMC10951915/
  7. www.sciencedirect.com www.sciencedirect.com
    Peripheral neuronal activation shapes the microbiome and alters gut physiology
    1
    1. scibot 22 Mar 2024
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      DOI: 10.1016/j.celrep.2024.113953

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    sciencedirect.com/science/article/pii/S221112472400281X
  8. Feb 2024
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Wastewater-based epidemiology applied at the building-level reveals distinct virome profiles based on the age of the contributing individuals
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    1. scibot 03 Feb 2024
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      DOI: 10.1186/s40246-024-00580-1

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    ncbi.nlm.nih.gov/pmc/articles/PMC10832175/
  10. Oct 2023
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
    1
    1. scibot 28 Oct 2023
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      DOI: 10.1093/gigascience/giad090

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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the venomous snail Kalloconus canariensis: a valuable model for venomics and comparative genomics
    1
    1. scibot 05 Oct 2023
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      DOI: 10.1093/gigascience/giad075

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541794/
  13. Sep 2023
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Thermophilic methane oxidation is widespread in Aotearoa-New Zealand geothermal fields
    1
    1. scibot 20 Sep 2023
      RRID:SCR_007105

      DOI: 10.3389/fmicb.2023.1253773

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    ncbi.nlm.nih.gov/pmc/articles/PMC10502179/
  15. link.springer.com link.springer.com
    Maize heat shock proteins—prospection, validation, categorization and in silico analysis of the different ZmHSP families
    1
    1. scibot 07 Sep 2023
      RRID:SCR_007105

      DOI: 10.1007/s44154-023-00104-2

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    link.springer.com/article/10.1007/s44154-023-00104-2
  16. Mar 2023
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Design of a stabilized RBD enables potently neutralizing SARS-CoV-2 single-component nanoparticle vaccines
    1
    1. scibot 22 Mar 2023
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      DOI: 10.1016/j.celrep.2023.112266

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    ncbi.nlm.nih.gov/pmc/articles/PMC9986124/
  18. pubs.rsc.org pubs.rsc.org
    Effectiveness of passive sampling for the detection and genetic characterization of human viruses in wastewater
    1
    1. scibot 09 Mar 2023
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      DOI: 10.1039/D2EW00867J

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    pubs.rsc.org/en/content/articlehtml/2023/ew/d2ew00867j
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_007105

      DOI: 10.46471/gigabyte.30

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
    1
    1. scibot 02 Mar 2023
      RRID:SCR_007105

      DOI: 10.46471/gigabyte.68

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693781/
  21. Feb 2023
  22. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
    1. scibot 16 Feb 2023
      RRID:SCR_007105

      DOI: 10.1016/j.ygeno.2023.110582

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    sciencedirect.com/science/article/pii/S0888754323000265
  23. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
    1
    1. scibot 08 Feb 2023
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giad003

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  24. Jan 2023
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Resistance to white spot syndrome virus in the European shore crab is associated with suppressed virion trafficking and heightened immune responses
    1
    1. scibot 15 Jan 2023
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      DOI: 10.3389/fimmu.2022.1057421

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    ncbi.nlm.nih.gov/pmc/articles/PMC9831657/
  26. Nov 2022
  27. academic.oup.com academic.oup.com
    Improved microbial genomes and gene catalog of the chicken gut from metagenomic sequencing of high-fidelity long reads
    1
    1. scibot 22 Nov 2022
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giac116

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac116/6833030
  28. Sep 2022
  29. www.sciencedirect.com www.sciencedirect.com
    Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi
    1
    1. scibot 20 Sep 2022
      RRID:SCR_007105

      DOI: 10.1016/j.cub.2022.08.071

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    sciencedirect.com/science/article/pii/S0960982222013938
  30. May 2022
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
    1
    1. scibot 04 May 2022
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giac027

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    ncbi.nlm.nih.gov/pmc/articles/PMC9055855/
  32. Mar 2022
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
    1
    1. scibot 31 Mar 2022
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giac028

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
    1
    1. scibot 18 Mar 2022
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giac021

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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  35. Feb 2022
  36. f1000research.com f1000research.com
    F1000Research Article: NIFtHool: an informatics program for identification of NifH proteins using deep neural networks.
    1
    1. scibot 17 Feb 2022
      RRID:SCR_007105

      DOI: 10.12688/f1000research.107925.1

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    f1000research.com/articles/11-164
  37. Jan 2022
  38. academic.oup.com academic.oup.com
    Large-scale phylogenomic analysis resolves a backbone phylogeny in ferns
    1
    1. scibot 22 Jan 2022
      RRID:SCR_007105

      DOI: 10.1093/gigascience/gix116

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    academic.oup.com/gigascience/article/7/2/gix116/4656250
  39. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
    1
    1. scibot 12 Jan 2022
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      DOI: 10.1002/yea.3688

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    onlinelibrary.wiley.com/doi/10.1002/yea.3688
  40. Oct 2021
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    On the diversity of F420 ‐dependent oxidoreductases: A sequence‐ and structure‐based classification
    1
    1. scibot 23 Oct 2021
      RRID:SCR_007105

      DOI: 10.1002/prot.26170

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    ncbi.nlm.nih.gov/pmc/articles/PMC8518648/
  42. Aug 2021
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The lost world of Cuatro Ciénegas Basin, a relictual bacterial niche in a desert oasis
    1
    1. scibot 09 Aug 2021
      RRID:SCR_007105

      DOI: 10.7554/eLife.38278

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    ncbi.nlm.nih.gov/pmc/articles/PMC6245727/
  44. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
    1
    1. scibot 08 Aug 2021
      RRID:SCR_007105

      DOI: 10.1016/j.cub.2018.06.027

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    sciencedirect.com/science/article/pii/S0960982218308182
  45. Jul 2021
  46. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
    1
    1. scibot 28 Jul 2021
      RRID:SCR_007105

      DOI: 10.1016/j.cub.2018.06.027

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    sciencedirect.com/science/article/pii/S0960982218308182
  47. Mar 2021
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial copper and phosphate transporter specificity was defined early in the evolution of eukaryotes
    1
    1. scibot 09 Mar 2021
      RRID:SCR_007105

      DOI: 10.7554/eLife.64690

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    ncbi.nlm.nih.gov/pmc/articles/PMC7924939/
  49. Feb 2021
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomics reveals synergy between biomass degrading enzymes and inorganic Fenton chemistry in leaf-cutting ant colonies
    1
    1. scibot 24 Feb 2021
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      DOI: 10.7554/eLife.61816

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    ncbi.nlm.nih.gov/pmc/articles/PMC7877906/
  51. academic.oup.com academic.oup.com
    A microbial gene catalog of anaerobic digestion from full-scale biogas plants
    1
    1. scibot 03 Feb 2021
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giaa164

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    academic.oup.com/gigascience/article/10/1/giaa164/6121636
  52. Oct 2020
  53. academic.oup.com academic.oup.com
    IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring
    1
    1. scibot 24 Oct 2020
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giaa111

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    academic.oup.com/gigascience/article/9/10/giaa111/5918865
  54. Sep 2020
  55. academic.oup.com academic.oup.com
    Connections between the human gut microbiome and gestational diabetes mellitus
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    1. scibot 17 Sep 2020
      RRID:SCR_007105

      DOI: 10.1093/gigascience/gix058

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    academic.oup.com/gigascience/article/6/8/gix058/4056270
  56. www.sciencedirect.com www.sciencedirect.com
    Functional and Genomic Variation between Human-Derived Isolates of Lachnospiraceae Reveals Inter- and Intra-Species Diversity
    1
    1. scibot 16 Sep 2020
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      DOI: 10.1016/j.chom.2020.05.005

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    sciencedirect.com/science/article/pii/S1931312820302870
  57. Jan 2020
  58. academic.oup.com academic.oup.com
    An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia
    1
    1. scibot 13 Jan 2020
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giz093

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    academic.oup.com/gigascience/article/8/8/giz093/5542322
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    GraphClust2: Annotation and discovery of structured RNAs with scalable and accessible integrative clustering
    1
    1. scibot 13 Jan 2020
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giz150

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    ncbi.nlm.nih.gov/pmc/articles/PMC6897289/
  60. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
    1
    1. scibot 13 Jan 2020
      RRID:SCR_007105

      DOI: 10.1093/gigascience/giz085

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    academic.oup.com/gigascience/article/8/7/giz085/5532406
  61. www.sciencedirect.com www.sciencedirect.com
    Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
    1
    1. scibot 13 Jan 2020
      RRID:SCR_007105

      DOI: 10.1016/j.cell.2019.10.014

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      Curator: @ethanbadger

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    sciencedirect.com/science/article/pii/S009286741931164X
  62. www.sciencedirect.com www.sciencedirect.com
    A Pathogen-Responsive Gene Cluster for Highly Modified Fatty Acids in Tomato
    1
    1. scibot 13 Jan 2020
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      DOI: 10.1016/j.cell.2019.11.037

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    Disordered gut microbiota and alterations in metabolic patterns are associated with atrial fibrillation
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    Establishment of a Macaca fascicularis gut microbiome gene catalog and comparison with the human, pig, and mouse gut microbiomes
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