71 Matching Annotations
  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level assemblies of two hexaploid bamboos Thyrsostachys oliveri and Thyrsostachys siamensis provide a foundation for functional and comparative genomics studies
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    pmc.ncbi.nlm.nih.gov/articles/PMC12699669/
  3. Oct 2025
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Proteome mining of Yersinia Enterocolitica for drug targets and computational inhibitor identification with ADMET, anti-inflammation potential and formulation characteristics
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    pmc.ncbi.nlm.nih.gov/articles/PMC12482588/
  5. Aug 2025
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    A unified cell atlas of vascular plants reveals cell-type foundational genes and accelerates gene discovery
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    sciencedirect.com/science/article/pii/S009286742500858X
  7. Jul 2025
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Dissecting FAP+ Cell Diversity in Pancreatic Cancer Uncovers an Interferon-Response Subtype of Cancer-Associated Fibroblasts with Tumor-Restraining Properties
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    pmc.ncbi.nlm.nih.gov/articles/PMC12214878/
  9. Jun 2025
  10. gigabytejournal.com gigabytejournal.com
    A draft genome assembly for the dart-poison frog Phyllobates terribilis
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    gigabytejournal.com/articles/157
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    Repeated duplications and losses shaped SMC complex evolution from archaeal ancestors to modern eukaryotes
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    sciencedirect.com/science/article/pii/S2211124725006266
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    ycaf090-html.html
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  13. May 2025
  14. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Repeatome diversity in sea anemone genomics (Cnidaria: Actiniaria) based on the Actiniaria-REPlib library
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    pmc.ncbi.nlm.nih.gov/articles/PMC12070523/
  15. dx.doi.org dx.doi.org
    Telomere-to-telomere genome of common bean (Phaseolus vulgaris L., YP4)
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    dx.doi.org/10.1093/gigascience/giaf001
  16. Apr 2025
  17. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Constructing a draft Indian cattle pangenome using short-read sequencing
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    pmc.ncbi.nlm.nih.gov/articles/PMC11994783/
  18. Mar 2025
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Lineage-Specific Class-A GPCR Dynamics Reflect Diverse Chemosensory Adaptations in Lophotrochozoa
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    pmc.ncbi.nlm.nih.gov/articles/PMC11886862/
  20. link.springer.com link.springer.com
    Microbial dysbiosis with tryptophan metabolites alteration in lower respiratory tract is associated with clinical responses to anti-PD-1 immunotherapy in advanced non-small cell lung cancer
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    link.springer.com/article/10.1007/s00262-025-03996-3
  21. academic.oup.com academic.oup.com
    Benchmarking short-read metagenomics tools for removing host contamination
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giaf004/8045180
  22. Jan 2025
  23. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing
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    pmc.ncbi.nlm.nih.gov/articles/PMC11659978/
  24. Aug 2024
  25. www.sciencedirect.com www.sciencedirect.com
    Exploring Waterborne Viruses in Groundwater: Quantification and Virome Characterization via Passive Sampling and Targeted Enrichment Sequencing
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    sciencedirect.com/science/article/pii/S0043135424012041
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  27. Jul 2024
  28. www.biorxiv.org www.biorxiv.org
    Evolutionary Dynamics of Lineage-Specific Class-A GPCR Subsets Reveal Widespread Chemosensory Roles and Adaptations in Lophotrochozoa
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    biorxiv.org/content/10.1101/2024.07.14.603414v1
  29. Apr 2024
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Large-scale genomic survey with deep learning-based method reveals strain-level phage specificity determinants
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    ncbi.nlm.nih.gov/pmc/articles/PMC11034027/
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    Staphylococcus aureus skin colonization is mediated by SasG lectin variation
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    sciencedirect.com/science/article/pii/S2211124724003504
  32. Mar 2024
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptome-informed identification and characterisation of Planococcus citri cis- and trans-isoprenyl diphosphate synthase genes
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    ncbi.nlm.nih.gov/pmc/articles/PMC10960109/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quantitative proteome dynamics across embryogenesis in a model chordate
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    ncbi.nlm.nih.gov/pmc/articles/PMC10951915/
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    Peripheral neuronal activation shapes the microbiome and alters gut physiology
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    sciencedirect.com/science/article/pii/S221112472400281X
  36. Feb 2024
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Wastewater-based epidemiology applied at the building-level reveals distinct virome profiles based on the age of the contributing individuals
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    ncbi.nlm.nih.gov/pmc/articles/PMC10832175/
  38. Oct 2023
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the venomous snail Kalloconus canariensis: a valuable model for venomics and comparative genomics
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    ncbi.nlm.nih.gov/pmc/articles/PMC10541794/
  41. Sep 2023
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Thermophilic methane oxidation is widespread in Aotearoa-New Zealand geothermal fields
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    ncbi.nlm.nih.gov/pmc/articles/PMC10502179/
  43. link.springer.com link.springer.com
    Maize heat shock proteins—prospection, validation, categorization and in silico analysis of the different ZmHSP families
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    link.springer.com/article/10.1007/s44154-023-00104-2
  44. Mar 2023
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Design of a stabilized RBD enables potently neutralizing SARS-CoV-2 single-component nanoparticle vaccines
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    ncbi.nlm.nih.gov/pmc/articles/PMC9986124/
  46. pubs.rsc.org pubs.rsc.org
    Effectiveness of passive sampling for the detection and genetic characterization of human viruses in wastewater
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    pubs.rsc.org/en/content/articlehtml/2023/ew/d2ew00867j
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Sex-based de novo transcriptome assemblies of the parasitoid wasp Encarsia suzannae, a host of the manipulative heritable symbiont Cardinium hertigii
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693781/
  49. Feb 2023
  50. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
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    sciencedirect.com/science/article/pii/S0888754323000265
  51. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  52. Jan 2023
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Resistance to white spot syndrome virus in the European shore crab is associated with suppressed virion trafficking and heightened immune responses
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    ncbi.nlm.nih.gov/pmc/articles/PMC9831657/
  54. Nov 2022
  55. academic.oup.com academic.oup.com
    Improved microbial genomes and gene catalog of the chicken gut from metagenomic sequencing of high-fidelity long reads
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac116/6833030
  56. Sep 2022
  57. www.sciencedirect.com www.sciencedirect.com
    Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi
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    sciencedirect.com/science/article/pii/S0960982222013938
  58. May 2022
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
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    ncbi.nlm.nih.gov/pmc/articles/PMC9055855/
  60. Mar 2022
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The haplotype-resolved chromosome pairs of a heterozygous diploid African cassava cultivar reveal novel pan-genome and allele-specific transcriptome features
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952263/
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  63. Feb 2022
  64. f1000research.com f1000research.com
    F1000Research Article: NIFtHool: an informatics program for identification of NifH proteins using deep neural networks.
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    f1000research.com/articles/11-164
  65. Jan 2022
  66. academic.oup.com academic.oup.com
    Large-scale phylogenomic analysis resolves a backbone phylogeny in ferns
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    academic.oup.com/gigascience/article/7/2/gix116/4656250
  67. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
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    onlinelibrary.wiley.com/doi/10.1002/yea.3688
  68. Oct 2021
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    On the diversity of F420 ‐dependent oxidoreductases: A sequence‐ and structure‐based classification
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    ncbi.nlm.nih.gov/pmc/articles/PMC8518648/
  70. Aug 2021
  71. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The lost world of Cuatro Ciénegas Basin, a relictual bacterial niche in a desert oasis
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    ncbi.nlm.nih.gov/pmc/articles/PMC6245727/
  72. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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    sciencedirect.com/science/article/pii/S0960982218308182
  73. Jul 2021
  74. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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    sciencedirect.com/science/article/pii/S0960982218308182
  75. Mar 2021
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial copper and phosphate transporter specificity was defined early in the evolution of eukaryotes
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    ncbi.nlm.nih.gov/pmc/articles/PMC7924939/
  77. Feb 2021
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomics reveals synergy between biomass degrading enzymes and inorganic Fenton chemistry in leaf-cutting ant colonies
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    ncbi.nlm.nih.gov/pmc/articles/PMC7877906/
  79. academic.oup.com academic.oup.com
    A microbial gene catalog of anaerobic digestion from full-scale biogas plants
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    academic.oup.com/gigascience/article/10/1/giaa164/6121636
  80. Oct 2020
  81. academic.oup.com academic.oup.com
    IDseq—An open source cloud-based pipeline and analysis service for metagenomic pathogen detection and monitoring
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    academic.oup.com/gigascience/article/9/10/giaa111/5918865
  82. Sep 2020
  83. academic.oup.com academic.oup.com
    Connections between the human gut microbiome and gestational diabetes mellitus
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    academic.oup.com/gigascience/article/6/8/gix058/4056270
  84. www.sciencedirect.com www.sciencedirect.com
    Functional and Genomic Variation between Human-Derived Isolates of Lachnospiraceae Reveals Inter- and Intra-Species Diversity
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    sciencedirect.com/science/article/pii/S1931312820302870
  85. Jan 2020
  86. academic.oup.com academic.oup.com
    An integrated respiratory microbial gene catalogue to better understand the microbial aetiology of Mycoplasma pneumoniae pneumonia
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    academic.oup.com/gigascience/article/8/8/giz093/5542322
  87. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    GraphClust2: Annotation and discovery of structured RNAs with scalable and accessible integrative clustering
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    ncbi.nlm.nih.gov/pmc/articles/PMC6897289/
  88. academic.oup.com academic.oup.com
    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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    academic.oup.com/gigascience/article/8/7/giz085/5532406
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    Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
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    sciencedirect.com/science/article/pii/S009286741931164X
  90. www.sciencedirect.com www.sciencedirect.com
    A Pathogen-Responsive Gene Cluster for Highly Modified Fatty Acids in Tomato
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    sciencedirect.com/science/article/pii/S0092867419313224
  91. academic.oupdev.silverchair.com academic.oupdev.silverchair.com
    Disordered gut microbiota and alterations in metabolic patterns are associated with atrial fibrillation
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    academic.oupdev.silverchair.com/gigascience/article/8/6/giz058/5506812
  92. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6377399/
  93. Nov 2018
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6177736/
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    academic.oup.com/gigascience/article/7/10/giy107/5091799
  96. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6137240/
  97. academic.oup.com academic.oup.com
    Establishment of a Macaca fascicularis gut microbiome gene catalog and comparison with the human, pig, and mouse gut microbiomes
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    academic.oup.com/gigascience/article/7/9/giy100/5076037
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    sciencedirect.com/science/article/pii/S0960982218308650
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    academic.oup.com/gigascience/article/7/4/giy034/4958981
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    academic.oup.com/gigascience/article/7/2/1/4656250
  101. europepmc.org europepmc.org
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    europepmc.org/articles/PMC5603765/
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  103. Nov 2017
  104. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/6/9/1/4077042/The-draft-genome-sequence-of-a-desert-tree-Populus
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    A Phylogenomic Solution to the Origin of Insects by Resolving Crustacean-Hexapod Relationships
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    sciencedirect.com/science/article/pii/S0960982217305766
  106. www.sciencedirect.com www.sciencedirect.com
    Domestication and Divergence of Saccharomyces cerevisiae Beer Yeasts
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    sciencedirect.com/science/article/pii/S0092867416310716