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Harmonized brain ontology and 3D atlases for human, macaque, and marmoset basal ganglia

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1. scibot 14 Nov 2026
  
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  DOI: 10.1016/j.cell.2026.10.033
  
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sciencedirect.com/science/article/pii/S0092867426012833
Sep 2026
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Architecture of the serotonergic projectome in the mouse brain

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1. scibot 11 Sep 2026
  
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  DOI: 10.1016/j.cell.2026.08.022
  
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sciencedirect.com/science/article/pii/S0092867426009955
Jan 2026
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1-s2.0-S2589004226002026-main-html.html

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1. scibot 30 Jan 2026
  
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  DOI: 10.1016/j.isci.2026.114827
  
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54.241.53.176/b88ec0d146988bb53936cda174a2bc6a4fe22876/1-s2.0-S2589004226002026-main-html.html
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A neural connectivity atlas for fly flight control

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1. scibot 22 Jan 2026
  
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  SCR_009619
  
  DOI: 10.1016/j.cub.2025.12.024
  
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sciencedirect.com/science/article/pii/S0960982225016720
Sep 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

DeMBA: a developmental atlas for navigating the mouse brain in space and time

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1. scibot 06 Sep 2025
  
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  DOI: 10.1038/s41467-025-63177-9
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12397216/
Jul 2025
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Dual targeting of transferrin receptor and CD98hc enhances brain exposure of large molecules

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1. scibot 24 Jul 2025
  
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  DOI: 10.1016/j.celrep.2025.116038
  
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sciencedirect.com/science/article/pii/S2211124725008095
Jun 2025
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Brain-wide connectivity and novelty response of the dorsal endopiriform nucleus in mice

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1. scibot 18 Jun 2025
  
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  DOI: 10.1016/j.celrep.2025.115827
  
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sciencedirect.com/science/article/pii/S2211124725005984
Mar 2025
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Segregated basal ganglia output pathways correspond to genetically divergent neuronal subclasses

1
1. scibot 29 Mar 2025
  
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  RRID:SCR_009619
  
  DOI: 10.1016/j.celrep.2025.115454
  
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sciencedirect.com/science/article/pii/S2211124725002256
Aug 2024
www.frontiersin.org www.frontiersin.org

7T MRI and Computational Modeling Supports a Critical Role of Lead Location in Determining Outcomes for Deep Brain Stimulation: A Case Report

1
1. scibot 02 Aug 2024
  
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  RRID:SCR_009619
  
  DOI: 10.3389/fnhum.2021.631778
  
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frontiersin.org/articles/10.3389/fnhum.2021.631778/full
Jul 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Specific and comprehensive genetic targeting reveals brain-wide distribution and synaptic input patterns of GABAergic axo-axonic interneurons

1
1. scibot 18 Jul 2024
  
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  RRID:SCR_009619
  
  DOI: 10.7554/eLife.93481
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11251723/
Oct 2023
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Prior information guided auto-segmentation of clinical target volume of tumor bed in postoperative breast cancer radiotherapy

1
1. scibot 17 Oct 2023
  
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  RRID:SCR_009619
  
  DOI: 10.1186/s13014-023-02355-9
  
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link.springer.com/article/10.1186/s13014-023-02355-9
Jan 2023
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Protocol for using serial two-photon tomography to map cell types and cerebrovasculature at single-cell resolution in the whole adult mouse brain

1
1. scibot 21 Jan 2023
  
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  RRID:SCR_009619
  
  DOI: 10.1016/j.xpro.2023.102048
  
  Resource: elastix (RRID:SCR_009619)
  
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sciencedirect.com/science/article/pii/S2666166723000060
Jul 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Quantitative relationship between cerebrovascular network and neuronal cell types in mice

1
1. scibot 12 Jul 2022
  
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  RRID:SCR_009619
  
  DOI: 10.1016/j.celrep.2022.110978
  
  Resource: elastix (RRID:SCR_009619)
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9271215/
May 2022
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Isolation disrupts social interactions and destabilizes brain development in bumblebees

1
1. scibot 18 May 2022
  
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  RRID:SCR_009619
  
  DOI: 10.1016/j.cub.2022.04.066
  
  Resource: elastix (RRID:SCR_009619)
  
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sciencedirect.com/science/article/pii/S0960982222007023
Mar 2022
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Topographic connectivity and cellular profiling reveal detailed input pathways and functionally distinct cell types in the subthalamic nucleus

1
1. scibot 02 Mar 2022
  
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  RRID:SCR_009619
  
  DOI: 10.1016/j.celrep.2022.110439
  
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sciencedirect.com/science/article/pii/S2211124722001668
Jan 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Diffusion MRI fiber diameter for muscle denervation assessment

1
1. scibot 07 Jan 2022
  
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  RRID:SCR_009619
  
  DOI: 10.21037/qims-21-313
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8666740/
Oct 2021
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NuMorph: Tools for cortical cellular phenotyping in tissue-cleared whole-brain images

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1. scibot 13 Oct 2021
  
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  RRID:SCR_009619
  
  DOI: 10.1016/j.celrep.2021.109802
  
  Resource: elastix (RRID:SCR_009619)
  
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sciencedirect.com/science/article/pii/S2211124721012626
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Sparse imaging and reconstruction tomography for high-speed high-resolution whole-brain imaging

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1. scibot 02 Oct 2021
  
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  SCR_009619
  
  DOI: 10.1016/j.crmeth.2021.100089
  
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sciencedirect.com/science/article/pii/S2667237521001442
Aug 2021
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Untitled document

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1. scibot 13 Aug 2021
  
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  RRID:SCR_009619
  
  DOI: 10.1007/s12021-017-9349-6
  
  Resource: elastix (RRID:SCR_009619)
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5797188/
academic.oup.com academic.oup.com

M2aia—Interactive, fast, and memory-efficient analysis of 2D and 3D multi-modal mass spectrometry imaging data

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1. scibot 06 Aug 2021
  
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  RRID:SCR_009619
  
  DOI: 10.1093/gigascience/giab049
  
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academic.oup.com/gigascience/article/10/7/giab049/6324284
Jul 2021
academic.oup.com academic.oup.com

M2aia—Interactive, fast, and memory-efficient analysis of 2D and 3D multi-modal mass spectrometry imaging data

1
1. scibot 23 Jul 2021
  
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  RRID:SCR_009619
  
  DOI: 10.1093/gigascience/giab049
  
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academic.oup.com/gigascience/article/10/7/giab049/6324284
Mar 2021
www.medrxiv.org www.medrxiv.org

Diffusion kurtosis imaging of white matter in bipolar disorder

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1. scibot 03 Mar 2021
  
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  RRID:SCR_009619
  
  DOI: 10.1101/2021.02.01.21250951
  
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  RRID:SCR_009619 RRIDCUR:Validated
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medrxiv.org/content/10.1101/2021.02.01.21250951v1
Feb 2021
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Reconstruction of motor control circuits in adult Drosophila using automated transmission electron microscopy

1
1. scibot 28 Feb 2021
  
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  RRID:SCR_009619
  
  DOI: 10.1016/j.cell.2020.12.013
  
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sciencedirect.com/science/article/pii/S0092867420316834
Sep 2020
www.frontiersin.org www.frontiersin.org

Accurate MR Image Registration to Anatomical Reference Space for Diffuse Glioma

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1. scibot 03 Sep 2020
  
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  RRID:SCR_009619
  
  DOI: 10.3389/fnins.2020.00585
  
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  Curator: @Naa003
  
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frontiersin.org/article/10.3389/fnins.2020.00585/full
Jan 2020
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Single-cell transcriptomes and whole-brain projections of serotonin neurons in the mouse dorsal and median raphe nuclei

1
1. scibot 13 Jan 2020
  
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  RRID:SCR_009619
  
  DOI: 10.7554/eLife.49424
  
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  Curator: @evieth
  
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  RRID:SCR_009619 RRIDCUR:Validated
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ncbi.nlm.nih.gov/pmc/articles/PMC6812963/
Nov 2018
www.sciencedirect.com www.sciencedirect.com

Anatomically Defined and Functionally Distinct Dorsal Raphe Serotonin Sub-systems

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1. scibot 05 Nov 2018
  
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  Elastix
  
  Curator: @Jmenke
  
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  RRID:SCR_009619 RRIDCUR:Missing
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sciencedirect.com/science/article/pii/S0092867418309711
link.springer.com link.springer.com

Untitled document

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1. scibot 05 Nov 2018
  
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link.springer.com/article/10.1007/s12021-017-9349-6
Nov 2017
elifesciences.org elifesciences.org

Untitled document

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1. scibot 08 Nov 2017
  
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elifesciences.org/articles/23379