58 Matching Annotations
  1. Sep 2024
  2. www.sciencedirect.com www.sciencedirect.com
    Bronze Age cheese reveals human-Lactobacillus interactions over evolutionary history
    1
    1. scibot 27 Sep 2024
      RRID:SCR_011798

      DOI: 10.1016/j.cell.2024.08.008

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    sciencedirect.com/science/article/pii/S0092867424008997
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Telomere-to-telomere gap-free genome assembly of the endangered Yangtze finless porpoise and East Asian finless porpoise
    1
    1. scibot 18 Sep 2024
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giae067

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    ncbi.nlm.nih.gov/pmc/articles/PMC11403816/
  4. Jul 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Innovative approach for high-throughput exploiting sex-specific markers in Japanese parrotfish Oplegnathus fasciatus
    1
    1. scibot 23 Jul 2024
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giae045

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    ncbi.nlm.nih.gov/pmc/articles/PMC11258905/
  6. scijournals.onlinelibrary.wiley.com scijournals.onlinelibrary.wiley.com
    Chromosome-level genome assembly and comparative genomics shed light on Helicoverpa assulta ecology and pest management
    1
    1. scibot 23 Jul 2024
      RRID:SCR_011798

      DOI: 10.1002/ps.8273

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    scijournals.onlinelibrary.wiley.com/doi/10.1002/ps.8273
  7. May 2024
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multi-repeat sequences identification using genome mining techniques for developing highly sensitive molecular diagnostic assay for the detection of Chlamydia trachomatis
    1
    1. scibot 24 May 2024
      RRID:SCR_011798

      DOI: 10.12688/openresafrica.14316.2

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    ncbi.nlm.nih.gov/pmc/articles/PMC11109563/
  9. Mar 2024
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inflammatory, metabolic and sex-dependent gene-regulatory dynamics of microglia and macrophages in neonatal hippocampus after hypoxia-ischemia
    1
    1. scibot 22 Mar 2024
      RRID:SCR_011798

      DOI: 10.1016/j.isci.2024.109346

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    ncbi.nlm.nih.gov/pmc/articles/PMC10945260/
  11. www.sciencedirect.com www.sciencedirect.com
    Non-homogenous axonal bouton distribution in whole-brain single-cell neuronal networks
    2
    1. scibot 06 Mar 2024
      RRID:SCR_011798

      DOI: 10.1016/j.celrep.2024.113871

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    2. scibot 06 Mar 2024
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      DOI: 10.1016/j.celrep.2024.113871

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    sciencedirect.com/science/article/pii/S2211124724001992
  12. Feb 2024
  13. www.biorxiv.org www.biorxiv.org
    Genome-wide exploration of metabolic-based pyrethroid resistance mechanism in Helicoverpa armigera
    2
    1. scibot 15 Feb 2024
      RRID:SCR_011798

      DOI: 10.1101/2023.12.18.572109

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    2. scibot 15 Feb 2024
      RRID:SCR_011798

      DOI: 10.1101/2023.12.18.572109

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    biorxiv.org/content/10.1101/2023.12.18.572109v1
  14. Jan 2024
  15. openresearchafrica.org openresearchafrica.org
    Multi-repeat sequences identification using genome mining ...
    1
    1. scibot 12 Jan 2024
      RRID:SCR_011798

      DOI: 10.12688/openresafrica.14316.1

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    openresearchafrica.org/articles/7-2
  16. Dec 2023
  17. www.sciencedirect.com www.sciencedirect.com
    SARS-CoV-2 RNA stabilizes host mRNAs to elicit immunopathogenesis
    1
    1. scibot 22 Dec 2023
      RRID:SCR_011798

      DOI: 10.1016/j.molcel.2023.11.032

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    sciencedirect.com/science/article/pii/S1097276523009784
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
    1. scibot 21 Dec 2023
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giad105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  19. Aug 2023
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale assembly of the yellow mealworm genome
    1
    1. scibot 31 Aug 2023
      RRID:SCR_011798

      DOI: 10.12688/openreseurope.13987.3

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    ncbi.nlm.nih.gov/pmc/articles/PMC10445852/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Haplogenome assembly reveals structural variation in Eucalyptus interspecific hybrids
    1
    1. scibot 29 Aug 2023
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giad064

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    ncbi.nlm.nih.gov/pmc/articles/PMC10460159/
  22. Jul 2023
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the hybrid grapevine Vitis ‘Chambourcin’
    1
    1. scibot 06 Jul 2023
      RRID:SCR_011798

      DOI: 10.46471/gigabyte.84

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    ncbi.nlm.nih.gov/pmc/articles/PMC10318349/
  24. Apr 2023
  25. link.springer.com link.springer.com
    MRF: a tool to overcome the barrier of inconsistent genome annotations and perform comparative genomics studies for the largest animal DNA virus
    1
    1. scibot 20 Apr 2023
      RRID:SCR_011798

      DOI: 10.1186/s12985-023-02035-w

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    link.springer.com/article/10.1186/s12985-023-02035-w
  26. Mar 2023
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale draft genome sequence of horsegram (Macrotyloma uniflorum)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_011798

      DOI: 10.46471/gigabyte.30

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650294/
  28. Jan 2023
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic study and lipidomic bioassay of Leeuwenhoekiella parthenopeia: A novel rare biosphere marine bacterium that inhibits tumor cell viability
    1
    1. scibot 25 Jan 2023
      RRID:SCR_011798

      DOI: 10.3389/fmicb.2022.1090197

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    ncbi.nlm.nih.gov/pmc/articles/PMC9859067/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Neoadjuvant Intravenous Oncolytic Vaccinia Virus Therapy Promotes Anticancer Immunity in Patients
    1
    1. scibot 11 Jan 2023
      RRID:SCR_011798

      DOI: 10.1158/2326-6066.CIR-21-0171

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    ncbi.nlm.nih.gov/pmc/articles/PMC9381099/
  31. Nov 2022
  32. academic.oup.com academic.oup.com
    Capparis spinosa var. herbacea genome provides the first genomic instrument for a diversity and evolution study of the Capparaceae family
    1
    1. scibot 03 Nov 2022
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giac106

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac106/6780308
  33. Oct 2022
  34. www.sciencedirect.com www.sciencedirect.com
    Circadian transcriptional pathway atlas highlights a proteasome switch in intermittent fasting
    1
    1. scibot 26 Oct 2022
      RRID:SCR_011798

      DOI: 10.1016/j.celrep.2022.111547

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    sciencedirect.com/science/article/pii/S2211124722014036
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly for the Aldabra giant tortoise enables insights into the genetic health of a threatened population
    1
    1. scibot 26 Oct 2022
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giac090

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    ncbi.nlm.nih.gov/pmc/articles/PMC9553416/
  36. Sep 2022
  37. molecular-cancer.biomedcentral.com molecular-cancer.biomedcentral.com
    TIGIT is the central player in T-cell suppression associated with CAR T-cell relapse in mantle cell lymphoma
    1
    1. scibot 27 Sep 2022
      RRID:SCR_011798

      DOI: 10.1186/s12943-022-01655-0

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    molecular-cancer.biomedcentral.com/articles/10.1186/s12943-022-01655-0
  38. www.sciencedirect.com www.sciencedirect.com
    Genomic analysis reveals cryptic diversity in aphelids and sheds light on the emergence of Fungi
    1
    1. scibot 20 Sep 2022
      RRID:SCR_011798

      DOI: 10.1016/j.cub.2022.08.071

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    sciencedirect.com/science/article/pii/S0960982222013938
  39. Jul 2022
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
    1
    1. scibot 14 Jul 2022
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giac070

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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  41. academic.oup.com academic.oup.com
    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
    1
    1. scibot 06 Jul 2022
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giac059

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac059/6619297
  42. Jun 2022
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Prediction of the effects of the top 10 nonsynonymous variants from 30229 SARS-CoV-2 strains on their proteins
    1
    1. scibot 17 Jun 2022
      RRID:SCR_011798

      DOI: 10.12688/f1000research.72904.2

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    ncbi.nlm.nih.gov/pmc/articles/PMC9184924/
  44. May 2022
  45. academic.oup.com academic.oup.com
    Chromosome‐level genome assembly of the black widow spider Latrodectus elegans illuminates composition and evolution of venom and silk proteins
    1
    1. scibot 28 May 2022
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giac049

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac049/6593146
  46. Apr 2022
  47. jeccr.biomedcentral.com jeccr.biomedcentral.com
    Growth factor independence underpins a paroxysmal, aggressive Wnt5aHigh/EphA2Low phenotype in glioblastoma stem cells, conducive to experimental combinatorial therapy
    1
    1. scibot 14 Apr 2022
      SCR_011798

      DOI: 10.1186/s13046-022-02333-1

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    jeccr.biomedcentral.com/articles/10.1186/s13046-022-02333-1/tables/2
  48. Jan 2022
  49. f1000research.com f1000research.com
    F1000Research Article: Prediction of the Effects of Nonsynonymous Variants on SARS-CoV-2 Proteins.
    1
    1. scibot 12 Jan 2022
      RRID:SCR_011798

      DOI: 10.12688/f1000research.72904.1

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    f1000research.com/articles/11-9
  50. Nov 2021
  51. academic.oup.com academic.oup.com
    De novo screening of disease-resistant genes from the chromosome-level genome of rare minnow using CRISPR-cas9 random mutation
    1
    1. scibot 23 Nov 2021
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giab075

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    academic.oup.com/gigascience/article/10/11/giab075/6431779
  52. Aug 2021
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Telomere Roles in Fungal Genome Evolution and Adaptation
    1
    1. scibot 25 Aug 2021
      RRID:SCR_011798

      DOI: 10.3389/fgene.2021.676751

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    ncbi.nlm.nih.gov/pmc/articles/PMC8381367/
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 07 Aug 2021
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      DOI: 10.7554/eLife.40037

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    ncbi.nlm.nih.gov/pmc/articles/PMC6249008/
  55. Jul 2021
  56. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Reflection of neuroblastoma intratumor heterogeneity in the new OHC‐NB1 disease model
    1
    1. scibot 29 Jul 2021
      CIRCOS

      DOI: 10.1002/ijc.32572

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    onlinelibrary.wiley.com/doi/10.1002/ijc.32572
  57. academic.oup.com academic.oup.com
    Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise
    1
    1. scibot 28 Jul 2021
      Circos

      DOI: 10.1093/gigascience/giz003

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    academic.oup.com/gigascience/article/8/5/giz003/5300102
  58. www.mdpi.com www.mdpi.com
    Genome of the Southern Giant Petrel Assembled Using Third-Generation DNA Sequencing and Linked Reads Reveals Evolutionary Traits of Southern Avian
    1
    1. scibot 16 Jul 2021
      RRID:SCR_011798

      DOI: 10.3390/ani11072046

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    mdpi.com/2076-2615/11/7/2046
  59. May 2021
  60. clincancerres.aacrjournals.org clincancerres.aacrjournals.org
    Alterations in BAP1 are Associated with Cisplatin Resistance Through Inhibition of Apoptosis in Malignant Pleural Mesothelioma (MPM).
    1
    1. scibot 10 May 2021
      RRID:SCR_011798

      DOI: 10.1158/1078-0432.CCR-20-4037

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    clincancerres.aacrjournals.org/content/27/8/2277
  61. Apr 2021
  62. academic.oup.com academic.oup.com
    A chromosome-level genome assembly for the Pacific oyster Crassostrea gigas
    1
    1. scibot 06 Apr 2021
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giab020

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    academic.oup.com/gigascience/article/10/3/giab020/6187865
  63. Mar 2021
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    New Insights Into Mitochondrial DNA Reconstruction and Variant Detection in Ancient Samples
    1
    1. scibot 09 Mar 2021
      RRID:SCR_011798

      DOI: 10.3389/fgene.2021.619950

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    ncbi.nlm.nih.gov/pmc/articles/PMC7930628/
  65. Feb 2021
  66. elifesciences.org elifesciences.org
    Dyshomeostatic modulation of Ca2+-activated K+ channels in a human neuronal model of KCNQ2 encephalopathy
    1
    1. scibot 11 Feb 2021
      RRID:SCR_011798

      DOI: 10.7554/eLife.64434

      Resource: Circos (RRID:SCR_011798)

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    elifesciences.org/articles/64434
  67. Dec 2020
  68. elifesciences.org elifesciences.org
    Maternal cortisol is associated with neonatal amygdala microstructure and connectivity in a sexually dimorphic manner
    1
    1. scibot 07 Dec 2020
      RRID:SCR_011798

      DOI: 10.7554/eLife.60729

      Resource: Circos (RRID:SCR_011798)

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    elifesciences.org/articles/60729
  69. Nov 2020
  70. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Novel circular RNA 2960 contributes to secondary damage of spinal cord injury by sponging miRNA‐124
    1
    1. scibot 27 Nov 2020
      RRID:SCR_011798

      DOI: 10.1002/cne.25030

      Resource: Circos (RRID:SCR_011798)

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    onlinelibrary.wiley.com/doi/10.1002/cne.25030
  71. Sep 2020
  72. www.sciencedirect.com www.sciencedirect.com
    Genetic Variation in Type 1 Diabetes Reconfigures the 3D Chromatin Organization of T Cells and Alters Gene Expression
    1
    1. scibot 26 Sep 2020
      RRID:SCR_011798

      DOI: 10.1016/j.immuni.2020.01.003

      Resource: Circos (RRID:SCR_011798)

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    sciencedirect.com/science/article/pii/S1074761320300303
  73. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
    1
    1. scibot 25 Sep 2020
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giaa099

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    pubmed.ncbi.nlm.nih.gov/32947622/
  74. academic.oup.com academic.oup.com
    Full genome survey and dynamics of gene expression in the greater amberjack Seriola dumerili
    1
    1. scibot 17 Sep 2020
      RRID:SCR_011798

      DOI: 10.1093/gigascience/gix108

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    academic.oup.com/gigascience/article/6/12/gix108/4600083
  75. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
    1
    1. scibot 11 Sep 2020
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giaa020

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    academic.oup.com/gigascience/article/9/3/giaa020/5810243
  76. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
    1
    1. scibot 11 Sep 2020
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giaa092

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    academic.oup.com/gigascience/article/9/8/giaa092/5897807
  77. Jan 2020
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale assembly of the major African malaria vector Anopheles funestus
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giz063

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    ncbi.nlm.nih.gov/pmc/articles/PMC6545970/
  79. academic.oup.com academic.oup.com
    High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011798

      DOI: 10.1093/gigascience/giz108

      Resource: Circos (RRID:SCR_011798)

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    academic.oup.com/gigascience/article-abstract/8/9/giz108/5560333
  80. www.sciencedirect.com www.sciencedirect.com
    Activation Dynamics and Immunoglobulin Evolution of Pre-existing and Newly Generated Human Memory B cell Responses to Influenza Hemagglutinin
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011798

      DOI: 10.1016/j.immuni.2019.06.024

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    sciencedirect.com/science/article/pii/S1074761319302948
  81. www.sciencedirect.com www.sciencedirect.com
    Intestinal Bile Acids Induce a Morphotype Switch in Vancomycin-Resistant Enterococcus that Facilitates Intestinal Colonization
    1
    1. scibot 13 Jan 2020
      RRID:SCR_011798

      DOI: 10.1016/j.chom.2019.03.008

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    sciencedirect.com/science/article/pii/S193131281930160X
  82. Nov 2018
  83. www.sciencedirect.com www.sciencedirect.com
    Modular Organization and Assembly of SWI/SNF Family Chromatin Remodeling Complexes
    1
    1. scibot 05 Nov 2018
      Circos

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S0092867418312443
  84. elifesciences.org elifesciences.org
    Epigenetic drift of H3K27me3 in aging links glycolysis to healthy longevity in Drosophila
    1
    1. scibot 05 Nov 2018
      RRID:SCR_011798

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    elifesciences.org/articles/35368
  85. www.sciencedirect.com www.sciencedirect.com
    Molecular, Pathological, Radiological, and Immune Profiling of Non-brainstem Pediatric High-Grade Glioma from the HERBY Phase II Randomized Trial
    1
    1. scibot 05 Nov 2018
      Circos

      Curator: @evieth

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    sciencedirect.com/science/article/pii/S1535610818301752
  86. academic.oup.com academic.oup.com
    Untitled document
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    1. scibot 05 Nov 2018
      RRID:SCR_011798

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    academic.oup.com/gigascience/article/6/12/1/4600083
  87. Nov 2017
  88. www.sciencedirect.com www.sciencedirect.com
    MicroRNAs Establish Uniform Traits during the Architecture of Vertebrate Embryos
    1
    1. scibot 08 Nov 2017
      Circos

      Curator: @kaitlinsung

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    sciencedirect.com/science/article/pii/S153458071730117X
  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A molecular portrait of maternal sepsis from Byzantine Troy
    1
    1. scibot 08 Nov 2017
      SCR_011798

      Curator: @gabimpine

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      (Circos, RRID:SCR_011798)

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    ncbi.nlm.nih.gov/pmc/articles/PMC5224923/