505 Matching Annotations
  1. Aug 2025
  2. www.jidonline.org www.jidonline.org
    Overexpression of NPY leads to progressive, cutaneous inflammatory fibrotic responses in mouse skin
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    jidonline.org/article/S0022-202X(25)02347-4/abstract
  3. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A near telomere-to-telomere phased genome assembly and annotation for the Australian central bearded dragon Pogona vitticeps
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    pmc.ncbi.nlm.nih.gov/articles/PMC12360841/
  4. www.biorxiv.org www.biorxiv.org
    Functional Role of Small Extrachromosomal Circular DNA in Colorectal Cancer
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    biorxiv.org/content/10.1101/2025.08.01.668183v1
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    Allelic bias contributes to heterogeneous phenotypes of NK cell deficiency
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    sciencedirect.com/science/article/pii/S2211124725008733
  6. Jul 2025
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    Neoadjuvant sintilimab and chemotherapy followed by transoral surgery for HPV-positive resectable oropharyngeal cancer: a single-arm, two-centre, phase 2 trial
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    sciencedirect.com/science/article/pii/S2589537025003256
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    TAF1 is required for fetal but not adult hematopoiesis in mice
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    sciencedirect.com/science/article/pii/S1534580725004058
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    Bacteriophage infection drives loss of β-lactam resistance in methicillin-resistant Staphylococcus aureus
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    pmc.ncbi.nlm.nih.gov/articles/PMC12245174/
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    Molecular and genetic evidence for the role of AMBRA1 in suppressing S-phase entry and tumorigenesis - ScienceDirect-html.html
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    Identifying candidate genetic variants for egg number by analyzing over 1,000 fully sequenced layers
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    pmc.ncbi.nlm.nih.gov/articles/PMC12203006/
  12. Jun 2025
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    A draft genome assembly for the dart-poison frog Phyllobates terribilis
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    gigabytejournal.com/articles/157
  15. rupress.org rupress.org
    Gut dysbiosis from high-salt diet promotes glioma via propionate-mediated TGF-β activation
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    A hexamer tandem repeat RNA embedded within an SVA retrotransposon drives R-loop formation and neurodegeneration
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    Satb1 directs the differentiation of TH17 cells through suppression of IL-2 expression
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    RNA shielding of P65 is required to potentiate oncogenic inflammation in TET2 mutated clonal hematopoiesis
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    Neuropeptides specify and reprogram division of labor in the leafcutter ant Atta cephalotes
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    Chromosome-level genome assembly and methylome profile yield insights for the conservation of endangered loggerhead sea turtles
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    Cholesterol metabolism regulated by CAMKK2-CREB signaling promotes castration-resistant prostate cancer
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  24. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Post-fertilization transcription initiation in an ancestral LTR retrotransposon drives lineage-specific genomic imprinting of ZDBF2
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    pmc.ncbi.nlm.nih.gov/articles/PMC12129452/
  25. May 2025
  26. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Impact of Subcutaneous Versus Orthotopic Implantations on Patient-Derived Xenograft Transcriptomic Profiles
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  27. link.springer.com link.springer.com
    Mycobacterium tuberculosis curli pili (MTP) and heparin-binding hemagglutinin adhesin (HBHA) facilitate regulation of central carbon metabolism, enhancement of ATP synthesis and cell wall biosynthesis
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    link.springer.com/article/10.1007/s00203-025-04352-w
  28. 52.53.155.43 52.53.155.43
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  29. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-scale assemblies of three Ormosia species: repetitive sequences distribution and structural rearrangement
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    Impact of ATF6 deletion on the embryonic brain development
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    sciencedirect.com/science/article/pii/S2589004225008302
  31. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The haplotype-resolved T2T genome for Bauhinia × blakeana sheds light on the genetic basis of flower heterosis
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    pmc.ncbi.nlm.nih.gov/articles/PMC12012898/
  32. www.sciencedirect.com www.sciencedirect.com
    Nerve- and airway-associated interstitial macrophages mitigate SARS-CoV-2 pathogenesis via type I interferon signaling
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    sciencedirect.com/science/article/pii/S1074761325001645
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    PNUTS:PP1 recruitment to Tox4 regulates chromosomal dispersal in Drosophila germline development
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    sciencedirect.com/science/article/pii/S2211124725004644
  34. onlinelibrary.wiley.com onlinelibrary.wiley.com
    A heterodimer of hemoglobin identifies theranostic targets on brain-metastasizing melanoma cells
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    onlinelibrary.wiley.com/doi/10.1002/ijc.35458
  35. Apr 2025
  36. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Interspecific hybridization in Brassica species leads to changes in agronomic traits through the regulation of gene expression by chromatin accessibility and DNA methylation
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  37. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Interleukin-33 (IL-33) promotes DNA damage-resistance in lung cancer
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    snRNA-seq analysis of the moss Physcomitrium patens reveals a conserved cytokinin-ESR module promoting pluripotent stem cell identity
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    The molecular basis of octocoral calcification revealed by genome and skeletal proteome analyses
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  41. Mar 2025
  42. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Effects of environmental salinity on global and endocrine‐specific transcriptomic profiles in the caudal neurosecretory system of salmonid fishes
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    pmc.ncbi.nlm.nih.gov/articles/PMC11923583/
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    Transcription factors associated with regulation of transcriptome in human thigh and calf muscles at baseline and after six days of disuse
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    sciencedirect.com/science/article/pii/S1874939925000112
  44. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Immune Checkpoint Blockade Delays Cancer Development and Extends Survival in DNA Polymerase Mutator Syndromes
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    T-bet+ CXCR3+ B cells drive hyperreactive B-T cell interactions in multiple sclerosis
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    m6A deficiency impairs hypothalamic neurogenesis of feeding-related neurons in mice and human organoids and leads to adult obesity in mice
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  47. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    NXP800 Activates the Unfolded Protein Response, Altering AR and E2F Function to Impact Castration-Resistant Prostate Cancer Growth
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    pmc.ncbi.nlm.nih.gov/articles/PMC11911806/
  48. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Nuclear Argonaute protein NRDE-3 switches small RNA partners during embryogenesis to mediate temporal-specific gene regulatory activity
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    pmc.ncbi.nlm.nih.gov/articles/PMC11906161/
  49. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
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    pmc.ncbi.nlm.nih.gov/articles/PMC11891882/
  50. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Impaired yolk sac NAD metabolism disrupts murine embryogenesis with relevance to human birth defects
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  51. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Draft genome of the endangered visayan spotted deer (Rusa alfredi), a Philippine endemic species
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    pmc.ncbi.nlm.nih.gov/articles/PMC11876970/
  52. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Development of a Microvessel Density Gene Signature and Its Application in Precision Medicine
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    pmc.ncbi.nlm.nih.gov/articles/PMC11880750/
  53. www.sciencedirect.com www.sciencedirect.com
    snRNA-seq analysis of the moss Physcomitrium patens identifies a conserved cytokinin-ESR module promoting pluripotent stem cell identity
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    sciencedirect.com/science/article/pii/S1534580725000681
  54. Feb 2025
  55. aacrjournals.org aacrjournals.org
    Clonal Lineage Tracing with Somatic Delivery of Recordable Barcodes Reveals Migration Histories of Metastatic Prostate Cancer
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    aacrjournals.org/cancerdiscovery/article/14/10/1990/748601/Clonal-Lineage-Tracing-with-Somatic-Delivery-of
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    A 5-hydroxymethylcytosine-based non-invasive model for early detection of colorectal carcinomas and advanced adenomas: the METHOD-2 study
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    aacrjournals.org/clincancerres/article/30/15/3337/746576/A-5-Hydroxymethylcytosine-Based-Noninvasive-Model
  57. aacrjournals.org aacrjournals.org
    DNA methylation profiling identifies subgroups of lung adenocarcinoma with distinct immune cell composition, DNA methylation age, and clinical outcome
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    aacrjournals.org/clincancerres/article/28/17/3824/708062/DNA-Methylation-Profiling-Identifies-Subgroups-of
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    Unraveling AURKB as a potential therapeutic target in pulmonary hypertension using integrated transcriptomic analysis and pre-clinical studies
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  59. Jan 2025
  60. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    FOXR2 Targets LHX6+/DLX+ Neural Lineages to Drive Central Nervous System Neuroblastoma
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  61. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The Functional Transcriptomic Landscape Informs Therapeutic Strategies in Multiple Myeloma
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  62. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The genome of the sapphire damselfish Chrysiptera cyanea: a new resource to support further investigation of the evolution of Pomacentrids
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  63. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A high-quality assembly revealing the PMEL gene for the unique plumage phenotype in Liancheng ducks
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  64. www.sciencedirect.com www.sciencedirect.com
    A single-nuclei transcriptome census of the Arabidopsis maturing root identifies that MYB67 controls phellem cell maturation
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    Multiple plastid losses within photosynthetic stramenopiles revealed by comprehensive phylogenomics
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  66. 52.53.155.43 52.53.155.43
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  67. Dec 2024
  68. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    BPDCN MYB fusions regulate cell cycle genes, impair differentiation, and induce myeloid–dendritic cell leukemia
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    3D chromatin hubs as regulatory units of identity and survival in human acute leukemia
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  70. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Whole-genome re-sequencing of the Baikal seal and other phocid seals for a glimpse into their genetic diversity, demographic history, and phylogeny
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    Deep profiling deconstructs features associated with memory CD8+ T cell tissue residence
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  72. www.biorxiv.org www.biorxiv.org
    Transcription factors associated with regulation of transcriptome in human thigh and calf muscles at baseline and after one week of disuse
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    biorxiv.org/content/10.1101/2024.12.10.627667v1
  73. www.mdpi.com www.mdpi.com
    Discovery, Validation and Mechanistic Study of XPO1 Inhibition in the Treatment of Triple-Negative Breast Cancer
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    mdpi.com/2072-6694/16/23/3980
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    Prenatal antibiotics reduce breast milk IgA and induce dysbiosis in mouse offspring, increasing neonatal susceptibility to bacterial sepsis
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    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
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  76. Nov 2024
  77. 52.53.155.43 52.53.155.43
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  78. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Building a community-driven bioinformatics platform to facilitate Cannabis sativa multi-omics research
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  79. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    CannSeek? Yes we Can! An open-source single nucleotide polymorphism database and analysis portal for Cannabis sativa
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    pmc.ncbi.nlm.nih.gov/articles/PMC11480739/
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  81. Oct 2024
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    HOXDeRNA activates a cancerous transcription program and super enhancers via genome-wide binding
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  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Quiescence and aging of melanocyte stem cells and a novel association with PD-L1
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  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Clinical value of liquid biopsy in FGFR2 fusion-positive cholangiocarcinoma patients during targeted therapy
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    ncbi.nlm.nih.gov/pmc/articles/PMC11443220/
  85. Sep 2024
  86. www.biorxiv.org www.biorxiv.org
    Multidirectional effect of low-intensity electrical myostimulation on gene expression and phenotype in thigh and calf muscles after one week of disuse
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    biorxiv.org/content/10.1101/2024.09.18.613609v1
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    EDC-3 and EDC-4 regulate embryonic mRNA clearance and biomolecular condensate specialization
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    Genomic surveillance as a scalable framework for precision phage therapy against antibiotic-resistant pathogens
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  89. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome, mitochondrial genome and associated transcriptomes for the critically endangered swift parrot ( Lathamus discolor)
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    Exon Skipping-based Subtyping of Colorectal Cancers
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  91. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Epitranscriptomic m6A Regulation of Axon Regeneration in the Adult Mammalian Nervous System
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    ncbi.nlm.nih.gov/pmc/articles/PMC5777326/
  92. www.biorxiv.org www.biorxiv.org
    Sex-specific chemosensory gene expression in the whitelined sphinx moth (Lepidoptera: Hyles lineata) suggests a role for odorant-binding proteins in host plant choice
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    biorxiv.org/content/10.1101/2024.09.04.611314v1
  93. febs.onlinelibrary.wiley.com febs.onlinelibrary.wiley.com
    FEBS Press
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    febs.onlinelibrary.wiley.com/doi/10.1002/1878-0261.13725
  94. Aug 2024
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Characterizing Relationships between T-cell Inflammation and Outcomes in Patients with High-Risk Neuroblastoma According to Mesenchymal and Adrenergic Signatures
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    ncbi.nlm.nih.gov/pmc/articles/PMC11350481/
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    Epithelial organoid supports resident memory CD8 T cell differentiation
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  196. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of an Australian native grass species reveals a recent whole-genome duplication and biased gene retention of genes involved in stress response
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10176504/
  197. academic.oup.com academic.oup.com
    A high-quality, long-read genome assembly of the whitelined sphinx moth (Lepidoptera: Sphingidae: Hyles lineata) shows highly conserved melanin synthesis pathway genes
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    academic.oup.com/g3journal/advance-article/doi/10.1093/g3journal/jkad090/7147210
  198. www.biorxiv.org www.biorxiv.org
    Bcl-xL is translocated to the nucleus via CtBP2 to epigenetically promote metastasis
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    biorxiv.org/content/10.1101/2023.04.26.538373v1
  199. Apr 2023
  200. onlinelibrary.wiley.com onlinelibrary.wiley.com
    The microbial community dynamics of cocaine sensitization in two behaviorally divergent strains of collaborative cross mice
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    onlinelibrary.wiley.com/doi/10.1111/gbb.12845
  201. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
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    ncbi.nlm.nih.gov/pmc/articles/PMC10087013/
  202. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Application of Genomic Sequencing to Refine Patient Stratification for Adjuvant Therapy in Renal Cell Carcinoma
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    ncbi.nlm.nih.gov/pmc/articles/PMC10068441/
  203. Mar 2023
  204. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Atria: an ultra-fast and accurate trimmer for adapter and quality trimming
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038132/
  205. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements to the Gulf pipefish Syngnathus scovelli genome
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038202/
  206. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated metabolic and genetic analysis reveals distinct features of primary differentiated thyroid cancer and its metastatic potential in humans
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    ncbi.nlm.nih.gov/pmc/articles/PMC10029066/
  207. www.sciencedirect.com www.sciencedirect.com
    Capture RIC-seq reveals positional rules of PTBP1-associated RNA loops in splicing regulation
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    sciencedirect.com/science/article/pii/S1097276523001582
  208. www.sciencedirect.com www.sciencedirect.com
    Stepwise activities of mSWI/SNF family chromatin remodeling complexes direct T cell activation and exhaustion
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    sciencedirect.com/science/article/pii/S1097276523001533
  209. europepmc.org europepmc.org
    mRNAs encoding IL-12 and a decoy-resistant variant of IL-18 synergize to engineer T cells for efficacious intratumoral adoptive immunotherapy
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    europepmc.org/article/med/36933554
  210. link.springer.com link.springer.com
    Expression of down-regulated ERV LTR elements associates with immune activation in human small-cell lung cancers
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    link.springer.com/article/10.1186/s13100-023-00290-w
  211. www.sciencedirect.com www.sciencedirect.com
    Transcriptional control of nucleus accumbens neuronal excitability by retinoid X receptor alpha tunes sensitivity to drug rewards
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    sciencedirect.com/science/article/pii/S0896627323001174
  212. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Smoking-associated Downregulation of FILIP1L Enhances Lung Adenocarcinoma Progression Through Mucin Production, Inflammation, and Fibrosis
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    ncbi.nlm.nih.gov/pmc/articles/PMC9973389/
  213. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Phagocytosis of Glioma Cells Enhances the Immunosuppressive Phenotype of Bone Marrow–Derived Macrophages
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    ncbi.nlm.nih.gov/pmc/articles/PMC9978884/
  214. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SnakeMAGs: a simple, efficient, flexible and scalable workflow to reconstruct prokaryotic genomes from metagenomes
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    ncbi.nlm.nih.gov/pmc/articles/PMC9978240/
  215. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MeCP2 regulates Gdf11, a dosage-sensitive gene critical for neurological function
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    ncbi.nlm.nih.gov/pmc/articles/PMC9977283/
  216. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic Resources for the North American Water Vole (Microtus richardsoni) and the Montane Vole (Microtus montanus)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631978/
  217. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome for the critically endangered woylie, Bettongia penicillata ogilbyi
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650285/
  218. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  219. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo construction of a transcriptome for the stink bug crop pest Chinavia impicticornis during late development
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631951/
  220. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The first Antechinus reference genome provides a resource for investigating the genetic basis of semelparity and age-related neuropathologies
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631953/
  221. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The draft genome assembly of the critically endangered Nyssa yunnanensis, a plant species with extremely small populations endemic to Yunnan Province, China
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632040/
  222. gigabytejournal.com gigabytejournal.com
    Genome assembly of the numbat (Myrmecobius fasciatus), the only termitivorous marsupial
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    gigabytejournal.com/articles/47
  223. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A genome assembly of the Atlantic chub mackerel (Scomber colias): a valuable teleost fishing resource
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650269/
  224. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Infection dynamics, transmission, and evolution after an outbreak of porcine reproductive and respiratory syndrome virus
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    ncbi.nlm.nih.gov/pmc/articles/PMC9947509/
  225. Feb 2023
  226. link.springer.com link.springer.com
    Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson’s disease
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    link.springer.com/article/10.1007/s00702-023-02604-x