Hypothesis

337 Matching Annotations

Jul 2025
academic.oup.com academic.oup.com

Telomere-to-telomere chromosome-scale genome assemblies of black and golden koi carp variants support construction of an ancient karyotype of Cypriniformes

1
1. scibot 31 Jul 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1093/gigascience/giaf073
  
  Resource: Cufflinks (RRID:SCR_014597)
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giaf073/8213833
Jun 2025
www.sciencedirect.com www.sciencedirect.com

Neuropeptides specify and reprogram division of labor in the leafcutter ant Atta cephalotes

1
1. scibot 11 Jun 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1016/j.cell.2025.05.023
  
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sciencedirect.com/science/article/pii/S0092867425005732
May 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Chromosome-level genome assemblies of five Sinocyclocheilus species

1
1. scibot 22 May 2025
  
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  SCR_014597
  
  DOI: 10.46471/gigabyte.155
  
  Resource: Cufflinks (RRID:SCR_014597)
  
  Curator: @scibot
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12089701/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Alternative mRNA splicing in anthracycline-induced cardiomyopathy – a COG-ALTE03N1 report

1
1. scibot 21 May 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1186/s40959-025-00345-2
  
  Resource: Cufflinks (RRID:SCR_014597)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12084991/
Apr 2025
aacrjournals.org aacrjournals.org

A Phase II Study of Abemaciclib for Patients with Retinoblastoma-Positive, Metastatic Triple-Negative Breast Cancer

1
1. scibot 17 Apr 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1158/1078-0432.CCR-24-2647
  
  Resource: Cufflinks (RRID:SCR_014597)
  
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aacrjournals.org/clincancerres/article/31/8/1427/754531/A-Phase-II-Study-of-Abemaciclib-for-Patients-with
Mar 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

NXP800 Activates the Unfolded Protein Response, Altering AR and E2F Function to Impact Castration-Resistant Prostate Cancer Growth

1
1. scibot 19 Mar 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1158/1078-0432.CCR-24-2386
  
  Resource: Cufflinks (RRID:SCR_014597)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11911806/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Multiomics analysis provides insights into musk secretion in muskrat and musk deer

1
1. scibot 07 Mar 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1093/gigascience/giaf006
  
  Resource: Cufflinks (RRID:SCR_014597)
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11878540/
Feb 2025
52.53.155.43 52.53.155.43

PDF-html.html

1
1. scibot 28 Feb 2025
  
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  RRID:SCR_014597
  
  DOI: 10.6084/m9.figshare.27897177
  
  Resource: Cufflinks (RRID:SCR_014597)
  
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52.53.155.43/67a7c34effc3e448ea9dd7b8214065a7299b09a8/PDF-html.html
aacrjournals.org aacrjournals.org

Interferon-a potentiates anti-PD-1 efficacy by remodeling glucose metabolism in the hepatocellular carcinoma microenvironment

1
1. scibot 14 Feb 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1158/2159-8290.CD-21-1022
  
  Resource: Cufflinks (RRID:SCR_014597)
  
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aacrjournals.org/cancerdiscovery/article/12/7/1718/705192/IFN-Potentiates-Anti-PD-1-Efficacy-by-Remodeling
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

PRMT5 Maintains Tumor Stem Cells to Promote Pediatric High-Grade Glioma Tumorigenesis

1
1. scibot 11 Feb 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1158/1541-7786.MCR-24-0233
  
  Resource: Cufflinks (RRID:SCR_014597)
  
  Curator: @scibot
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11799838/
onlinelibrary.wiley.com onlinelibrary.wiley.com

Untitled document

11
1. scibot 11 Feb 2025
  
  in Public
  
  OMICS_01304
  
  DOI: 10.1002/cne.23989
  
  Resource: None
  
  Curator: @sjvitug
  
  SciCrunch record: RRID:SCR_014597
  
  What is this?
  
  RRID:SCR_014597 RRIDCUR:Unresolved
2. scibot 10 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
3. scibot 09 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
4. scibot 08 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
5. scibot 07 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
6. scibot 06 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
7. scibot 05 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
8. scibot 04 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
9. scibot 03 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
10. scibot 02 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
11. scibot 01 Feb 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
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RRIDCUR:Unresolved

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scibot

URL

onlinelibrary.wiley.com/doi/10.1002/cne.23989/abstract
52.53.155.43 52.53.155.43

noaf029-html.html

1
1. scibot 06 Feb 2025
  
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  RRID:SCR_014597
  
  DOI: 10.1093/neuonc/noaf029
  
  Resource: Cufflinks (RRID:SCR_014597)
  
  Curator: @scibot
  
  SciCrunch record: RRID:SCR_014597
  
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scibot

URL

52.53.155.43/aba4e22899f43af825227e04415d74000c1531ba/noaf029-html.html
Jan 2025
onlinelibrary.wiley.com onlinelibrary.wiley.com

Untitled document

25
1. scibot 31 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
2. scibot 30 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
3. scibot 29 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
4. scibot 28 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
5. scibot 27 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
6. scibot 26 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
7. scibot 25 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
8. scibot 24 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
9. scibot 23 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
10. scibot 22 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
11. scibot 21 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
12. scibot 20 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
13. scibot 19 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
14. scibot 18 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
15. scibot 17 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
16. scibot 16 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
17. scibot 15 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
18. scibot 14 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
19. scibot 13 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
20. scibot 12 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRIDCUR:Unresolved RRID:SCR_014597
21. scibot 11 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
22. scibot 10 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
23. scibot 09 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
24. scibot 08 Jan 2025
  
  in Public
  
  OMICS_01304
  
  Traceback (most recent call last): File "/home/ubuntu/dashboard/py/create_release_tables.py", line 54, in format_anno_for_release parsedanno = HypothesisAnnotation(anno) File "/home/ubuntu/dashboard/py/hypothesis.py", line 191, in init if 'document' in row and 'title' in row['document']: TypeError: argument of type 'NoneType' is not iterable
  
  RRID:SCR_014597 RRIDCUR:Unresolved
25. scibot 07 Jan 2025
  
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  OMICS_01304
  
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Deep profiling deconstructs features associated with memory CD8+ T cell tissue residence

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Satb1 regulates Contactin 5 to pattern dendrites of a mammalian retinal ganglion cell

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MITF Targets in Gastrointestinal Stromal Tumors: Implications in Autophagy and Extracellular Vesicle Secretion

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Cellular origin and clonal evolution of human dedifferentiated liposarcoma

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Transcriptomic analysis of the hippocampus from six inbred strains of mice suggests a basis for sex‐specific susceptibility and severity of neurological disorders

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A chronic signaling TGFb zebrafish reporter identifies immune response in melanoma

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Surgical tumour resection deregulates Hallmarks of Cancer in resected tissue and the surrounding microenvironment

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Development of chromosome 1q+ specific treatment for highest risk pediatric posterior fossa ependymoma

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mcr-23-0265-html.html

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ALK inhibitors suppress HCC and synergize with anti-PD-1 therapy and ABT-263 in preclinical models

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cell.com/iscience/abstract/S2589-0042(24)01022-8
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Treatment response in first-line metastatic pancreatic ductal adenocarcinoma is stratified by a composite index of tumor proliferation and CD8 T cell infiltration

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The Immunogenomic Landscape of Neuroendocrine Prostate Cancer

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BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience in Xenopus laevis tadpoles

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Gain-of-function p53 mutation acts as a genetic switch for TGF-β signaling-induced epithelial-to-mesenchymal transition in intestinal tumors

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Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family

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Integration of transcriptomes of senescent cell models with multi-tissue patient samples reveals reduced COL6A3 as an inducer of senescence

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Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield

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Transcriptional dynamics of delaminating neuroblasts in the mouse otic vesicle

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Reversible transitions between noradrenergic and mesenchymal tumor identities define cell plasticity in neuroblastoma

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Proteasome Inhibitors Silence Oncogenes in Multiple Myeloma through Localized Histone Deacetylase 3 Stabilization and Chromatin Condensation

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Inhibition of karyopherin β1-mediated nuclear import disrupts oncogenic lineage- defining transcription factor activity in small cell lung cancer

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Annotation of chitin biosynthesis genes in Diaphorina citri, the Asian citrus psyllid

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In silico characterization of chitin deacetylase genes in the Diaphorina citri genome

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Annotation of putative circadian rhythm-associated genes in Diaphorina citri (Hemiptera: Liviidae)

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Genomic identification, annotation, and comparative analysis of Vacuolar-type ATP synthase subunits in Diaphorina citri

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Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease

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Utilizing a chromosomal-length genome assembly to annotate the Wnt signaling pathway in the Asian citrus psyllid, Diaphorina citri

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Ubiquitin-proteasome pathway annotation in Diaphorina citri can reveal potential targets for RNAi-based pest management

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A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340

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Feb 2023
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Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson’s disease

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Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms

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Jan 2023
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A chromosome-level genome assembly of Plantago ovata

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A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes

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Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure

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Interleukin-33-activated neuropeptide CGRP-producing memory Th2 cells cooperate with somatosensory neurons to induce conjunctival itch

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Combined – whole blood and skin fibroblasts- transcriptomic analysis in Psoriatic Arthritis reveals molecular signatures of activity, resistance and early response to treatment

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Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes

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Degradation of GSPT1 causes TP53-independent cell death in leukemia whilst sparing normal hematopoietic stem cells

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The transcription factor Tbx5 regulates direction-selective retinal ganglion cell development and image stabilization

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Losartan blocks osteosarcoma-elicited monocyte recruitment, and combined with the kinase inhibitor toceranib, exerts significant clinical benefit in canine metastatic osteosarcoma

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Jul 2022
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can-21-3713-html.html

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Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies

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Single B Cell Gene Co-Expression Networks Implicated in Prognosis, Proliferation, and Therapeutic Responses in Non-Small Cell Lung Cancer Bulk Tumors

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Jun 2022
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cd-21-1022-html.html

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A Whole Transcriptome Analysis in Peripheral Blood Suggests That Energy Metabolism and Inflammation Are Involved in Major Depressive Disorder

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The assembled and annotated genome of the masked palm civet (Paguma larvata)

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Deconvoluting mechanisms of acquired resistance to RAF inhibitors in BRAF V600E mutant human glioma

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Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding

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An adult-stage transcriptional program for survival of serotonergic connectivity

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A high-quality assembled genome and its comparative analysis decode the adaptive molecular mechanism of the number one Chinese cotton variety CRI-12

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High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant

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Genome sequence of the Japanese oak silk moth, Antheraea yamamai: the first draft genome in the family Saturniidae

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Identification of new ETV6 modulators through a high throughput functional screening

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The new Haemaphysalis longicornis genome provides insights into its requisite biological traits

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Feb 2022
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Genetic Liability for Internalizing Versus Externalizing Behavior Manifests in the Developing and Adult Hippocampus: Insight From a Meta-analysis of Transcriptional Profiling Studies in a Selectively Bred Rat Model

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Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data

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Jan 2022
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Modulation of the Human Pancreatic Ductal Adenocarcinoma Immune Microenvironment by Stereotactic Body Radiotherapy

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Dec 2021
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A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck)

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Purification of astrocyte subtype based on a double reporter mice approach for downstream transcription profiling

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lncRNA BORG:TRIM28 Complexes Drive Metastatic Progression by Inducing α6 Integrin/CD49f Expression in Breast Cancer Stem Cells

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Oct 2021
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The Arabidopsis mature endosperm promotes seedling cuticle formation via release of sulfated peptides

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BPS Publications

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A Role for Translational Regulation by S6 Kinase and a Downstream Target in Inflammatory Pain

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Aug 2021
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Characterizing microRNA-mediated modulation of gene expression noise and its effect on synthetic gene circuits

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Disruption of NEUROD2 causes a neurodevelopmental syndrome with autistic features via cell-autonomous defects in forebrain glutamatergic neurons

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Altered mitochondria functionality defines a metastatic cell state in lung cancer and creates an exploitable vulnerability

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Affinity maturation of SARS-CoV-2 neutralizing antibodies confers potency, breadth, and resilience to viral escape mutations

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Binary Fate Choice between Closely Related Interneuronal Types Is Determined by a Fezf1-Dependent Postmitotic Transcriptional Switch

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Identification of candidates for driver oncogenes in scirrhous‐type gastric cancer cell lines

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PDGFR-β Signaling Regulates Cardiomyocyte Proliferation and Myocardial Regeneration

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Subregional differences in astrocytes underlie selective neurodegeneration or protection in Parkinson's disease models in culture

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Analysis of the genomic architecture of a complex trait locus in hypertensive rat models links Tmem63c to kidney damage

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Analysis of long non‐coding RNA expression profiles in neonatal rats with hypoxic‐ischemic brain damage

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Reprogramming of Meiotic Chromatin Architecture during Spermatogenesis

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Transcriptome Landscape of Human Folliculogenesis Reveals Oocyte and Granulosa Cell Interactions

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Deregulated Expression of Mammalian lncRNA through Loss of SPT6 Induces R-Loop Formation, Replication Stress, and Cellular Senescence

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Exon Junction Complexes Suppress Spurious Splice Sites to Safeguard Transcriptome Integrity

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Mutant NPM1 Maintains the Leukemic State through HOX Expression

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Modeling Enzyme Processivity Reveals that RNA-Seq Libraries Are Biased in Characteristic and Correctable Ways

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Chromosomal-level assembly of yellow catfish genome using third-generation DNA sequencing and Hi-C analysis

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Transcriptome profiling of developing photoreceptor subtypes reveals candidate genes involved in avian photoreceptor diversification

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Transcriptome profiling of the Olig2-expressing astrocyte subtype reveals their unique molecular signature

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Secretory mucin 5AC promotes neoplastic progression by augmenting KLF4-mediated pancreatic cancer cell stemness

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MicroRNA-200c restoration reveals a cytokine profile to enhance M1 macrophage polarization in breast cancer

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May 2021
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Chromosome‐level genome assembly of the Arctic fox (Vulpes lagopus) using PacBio sequencing and Hi‐C technology

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The Meishan pig genome reveals structural variation mediated gene expression and phenotypic divergence underlying Asian pig domestication

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HAND1 and BARX1 act as transcriptional and anatomic determinants of malignancy in gastrointestinal stromal tumor

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YAP1 Mediates Trametinib Resistance in Head and Neck Squamous Cell Carcinomas

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A Specialized Niche in the Pancreatic Microenvironment Promotes Endocrine Differentiation

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Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus, a widely distributed species from the temperate areas of East Asia

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Melatonin enhances nitrogen metabolism and haustorium development in hemiparasite Santalum album Linn

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Transposase-assisted tagmentation of RNA/DNA hybrid duplexes

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Identification of regenerative processes in neonatal spinal cord injury in the opossum (Monodelphis domestica), a transcriptomic study

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Inverse Data-Driven Modeling and Multiomics Analysis Reveals Phgdh as a Metabolic Checkpoint of Macrophage Polarization and Proliferation

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Direct reprogramming of oligodendrocyte precursor cells into GABAergic inhibitory neurons by a single homeodomain transcription factor Dlx2

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Pancreatic progenitor epigenome maps prioritize type 2 diabetes risk genes with roles in development

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The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia

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A chromosome-level genome assembly of the oriental river prawn, Macrobrachium nipponense

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Pituitary stem cells produce paracrine WNT signals to control the expansion of their descendant progenitor cells

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Neuropeptides Modulate Local Astrocytes to Regulate Adult Hippocampal Neural Stem Cells

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High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis

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Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation

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Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome

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1. scibot 30 Oct 2020
  
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  RRID:SCR_014597
  
  DOI: 10.1093/gigascience/giaa114
  
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academic.oup.com/gigascience/article/9/10/giaa114/5938995
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Differential Effects of Voclosporin and Tacrolimus on Insulin Secretion From Human Islets

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1. scibot 27 Oct 2020
  
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  RRID:SCR_014597
  
  DOI: 10.1210/endocr/bqaa162
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7567406/
Sep 2020
elifesciences.org elifesciences.org

A human ESC-based screen identifies a role for the translated lncRNA LINC00261 in pancreatic endocrine differentiation

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1. scibot 26 Sep 2020
  
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  RRID:SCR_014597
  
  DOI: 10.7554/eLife.58659
  
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Lactate production by Staphylococcus aureus biofilm inhibits HDAC11 to reprogramme the host immune response during persistent infection

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1. scibot 23 Sep 2020
  
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  DOI: 10.1038/s41564-020-0756-3
  
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nature.com/articles/s41564-020-0756-3
academic.oup.com academic.oup.com

Chromosome-level reference genome of the jellyfish Rhopilema esculentum

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1. scibot 23 Sep 2020
  
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  RRID:SCR_014597
  
  DOI: 10.1093/gigascience/giaa036
  
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  Curator: @ethanbadger
  
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academic.oup.com/gigascience/article/9/4/giaa036/5823175
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OsNSUN2-Mediated 5-Methylcytosine mRNA Modification Enhances Rice Adaptation to High Temperature

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1. scibot 17 Sep 2020
  
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  RRID:SCR_014597
  
  DOI: 10.1016/j.devcel.2020.03.009
  
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sciencedirect.com/science/article/pii/S1534580720301933
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LIM-Homeodomain Transcription Factor LHX4 Is Required for the Differentiation of Retinal Rod Bipolar Cells and OFF-Cone Bipolar Subtypes

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1. scibot 17 Sep 2020
  
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  RRID:SCR_014597
  
  DOI: 10.1016/j.celrep.2020.108144
  
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sciencedirect.com/science/article/pii/S2211124720311335
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An improved zebrafish transcriptome annotation for sensitive and comprehensive detection of cell type-specific genes

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1. scibot 16 Sep 2020
  
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  RRID:SCR_014597
  
  DOI: 10.7554/eLife.55792
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7486121/
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The ESRP1-GPR137 axis contributes to intestinal pathogenesis

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1. scibot 15 Sep 2020
  
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  DOI: 10.7554/eLife.28366
  
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A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng

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1. scibot 14 Sep 2020
  
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  RRID:SCR_014597
  
  DOI: 10.1093/gigascience/giz164
  
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ncbi.nlm.nih.gov/pmc/articles/PMC6964648/

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