279 Matching Annotations
  1. Mar 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Treatment response in first-line metastatic pancreatic ductal adenocarcinoma is stratified by a composite index of tumor proliferation and CD8 T cell infiltration
    1
    1. scibot 03 Mar 2024
      RRID:SCR_014597

      DOI: 10.1158/1078-0432.CCR-23-0535

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    ncbi.nlm.nih.gov/pmc/articles/PMC10530235/
  3. Feb 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Immunogenomic Landscape of Neuroendocrine Prostate Cancer
    1
    1. scibot 02 Feb 2024
      RRID:SCR_014597

      DOI: 10.1158/1078-0432.CCR-22-3743

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    ncbi.nlm.nih.gov/pmc/articles/PMC10524949/
  5. Jan 2024
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    BRCA1 and ELK-1 regulate neural progenitor cell fate in the optic tectum in response to visual experience in Xenopus laevis tadpoles
    1
    1. scibot 24 Jan 2024
      RRID:SCR_014597

      DOI: 10.1073/pnas.2316542121

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    ncbi.nlm.nih.gov/pmc/articles/PMC10801852/
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gain-of-function p53 mutation acts as a genetic switch for TGF-β signaling-induced epithelial-to-mesenchymal transition in intestinal tumors
    1
    1. scibot 05 Jan 2024
      RRID: SCR_014597

      DOI: 10.1158/0008-5472.CAN-23-1490

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    ncbi.nlm.nih.gov/pmc/articles/PMC10758690/
  8. Dec 2023
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
    1. scibot 21 Dec 2023
      RRID:SCR_014597

      DOI: 10.1093/gigascience/giad105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  10. Nov 2023
  11. www.sciencedirect.com www.sciencedirect.com
    Integration of transcriptomes of senescent cell models with multi-tissue patient samples reveals reduced COL6A3 as an inducer of senescence
    1
    1. scibot 17 Nov 2023
      RRID:SCR_014597

      DOI: 10.1016/j.celrep.2023.113371

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    sciencedirect.com/science/article/pii/S2211124723013839
  12. Sep 2023
  13. www.sciencedirect.com www.sciencedirect.com
    Integration of eQTL and machine learning to dissect causal genes with pleiotropic effects in genetic regulation networks of seed cotton yield
    1
    1. scibot 08 Sep 2023
      RRID:SCR_014597

      DOI: 10.1016/j.celrep.2023.113111

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    sciencedirect.com/science/article/pii/S2211124723011221
  14. May 2023
  15. www.sciencedirect.com www.sciencedirect.com
    Transcriptional dynamics of delaminating neuroblasts in the mouse otic vesicle
    1
    1. scibot 25 May 2023
      RRID:SCR_014597

      DOI: 10.1016/j.celrep.2023.112545

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    sciencedirect.com/science/article/pii/S2211124723005569
  16. www.nature.com www.nature.com
    Reversible transitions between noradrenergic and mesenchymal tumor identities define cell plasticity in neuroblastoma
    1
    1. scibot 06 May 2023
      RRID:SCR_014597

      DOI: 10.1038/s41467-023-38239-5

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    nature.com/articles/s41467-023-38239-5
  17. Mar 2023
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteasome Inhibitors Silence Oncogenes in Multiple Myeloma through Localized Histone Deacetylase 3 Stabilization and Chromatin Condensation
    1
    1. scibot 29 Mar 2023
      RRID:SCR_014597

      DOI: 10.1158/2767-9764.CRC-22-0255

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    ncbi.nlm.nih.gov/pmc/articles/PMC9949381/
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inhibition of karyopherin β1-mediated nuclear import disrupts oncogenic lineage- defining transcription factor activity in small cell lung cancer
    1
    1. scibot 05 Mar 2023
      RRID:SCR_01459

      DOI: 10.1158/0008-5472.CAN-21-3713

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    ncbi.nlm.nih.gov/pmc/articles/PMC9444950/
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Annotation of chitin biosynthesis genes in Diaphorina citri, the Asian citrus psyllid
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.23

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631950/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    In silico characterization of chitin deacetylase genes in the Diaphorina citri genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.25

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    ncbi.nlm.nih.gov/pmc/articles/PMC9632012/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Annotation of putative circadian rhythm-associated genes in Diaphorina citri (Hemiptera: Liviidae)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.48

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    ncbi.nlm.nih.gov/pmc/articles/PMC9662589/
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic identification, annotation, and comparative analysis of Vacuolar-type ATP synthase subunits in Diaphorina citri
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.39

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    ncbi.nlm.nih.gov/pmc/articles/PMC9933544/
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Annotation of yellow genes in Diaphorina citri, the vector for Huanglongbing disease
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.20

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631960/
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Utilizing a chromosomal-length genome assembly to annotate the Wnt signaling pathway in the Asian citrus psyllid, Diaphorina citri
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.21

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631999/
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ubiquitin-proteasome pathway annotation in Diaphorina citri can reveal potential targets for RNAi-based pest management
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.43

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    ncbi.nlm.nih.gov/pmc/articles/PMC9933519/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014597

      DOI: 10.46471/gigabyte.63

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  28. Feb 2023
  29. link.springer.com link.springer.com
    Genes critical for development and differentiation of dopaminergic neurons are downregulated in Parkinson’s disease
    1
    1. scibot 25 Feb 2023
      RRID:SCR_014597

      DOI: 10.1007/s00702-023-02604-x

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    link.springer.com/article/10.1007/s00702-023-02604-x
  30. www.mdpi.com www.mdpi.com
    Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms
    1
    1. scibot 04 Feb 2023
      RRID:SCR_014597

      DOI: 10.3390/insects14020144

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    mdpi.com/2075-4450/14/2/144
  31. Jan 2023
  32. www.nature.com www.nature.com
    A chromosome-level genome assembly of Plantago ovata
    1
    1. scibot 31 Jan 2023
      RRID:SCR_014597

      DOI: 10.1038/s41598-022-25078-5

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    nature.com/articles/s41598-022-25078-5
  33. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
    1. scibot 20 Jan 2023
      RRID:SCR_014597

      DOI: 10.1101/2023.01.10.523438

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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  34. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
    1
    1. scibot 10 Jan 2023
      RRID:SCR_014597

      DOI: 10.1002/ps.7319

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    onlinelibrary.wiley.com/doi/10.1002/ps.7319
  35. Oct 2022
  36. www.sciencedirect.com www.sciencedirect.com
    Interleukin-33-activated neuropeptide CGRP-producing memory Th2 cells cooperate with somatosensory neurons to induce conjunctival itch
    1
    1. scibot 23 Oct 2022
      RRID:SCR_014597

      DOI: 10.1016/j.immuni.2022.09.016

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    sciencedirect.com/science/article/pii/S1074761322005118
  37. Sep 2022
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Combined – whole blood and skin fibroblasts- transcriptomic analysis in Psoriatic Arthritis reveals molecular signatures of activity, resistance and early response to treatment
    1
    1. scibot 24 Sep 2022
      SCR_014597

      DOI: 10.3389/fimmu.2022.964274

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    ncbi.nlm.nih.gov/pmc/articles/PMC9493103/
  39. academic.oup.com academic.oup.com
    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
    1
    1. scibot 16 Sep 2022
      RRID:SCR_014597

      DOI: 10.1093/gigascience/giac085

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac085/6700067
  40. Aug 2022
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Degradation of GSPT1 causes TP53-independent cell death in leukemia whilst sparing normal hematopoietic stem cells
    1
    1. scibot 26 Aug 2022
      RRID:SCR_014597

      DOI: 10.1172/JCI153514

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    ncbi.nlm.nih.gov/pmc/articles/PMC9374383/
  42. www.sciencedirect.com www.sciencedirect.com
    The transcription factor Tbx5 regulates direction-selective retinal ganglion cell development and image stabilization
    1
    1. scibot 23 Aug 2022
      RRID:SCR_014597

      DOI: 10.1016/j.cub.2022.07.064

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    sciencedirect.com/science/article/pii/S0960982222012131
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Losartan blocks osteosarcoma-elicited monocyte recruitment, and combined with the kinase inhibitor toceranib, exerts significant clinical benefit in canine metastatic osteosarcoma
    1
    1. scibot 22 Aug 2022
      RRID:SCR_014597

      DOI: 10.1158/1078-0432.CCR-21-2105

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    ncbi.nlm.nih.gov/pmc/articles/PMC8866227/
  44. Jul 2022
  45. 52.53.155.43 52.53.155.43
    can-21-3713-html.html
    1
    1. scibot 29 Jul 2022
      RRID:SCR_01459

      DOI: 10.1158/0008-5472.CAN-21-3713

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    52.53.155.43/10b1307b786c1d01a6cf28f8a0210c58728fe8fb/can-21-3713-html.html
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
    1
    1. scibot 14 Jul 2022
      RRID:SCR_014597

      DOI: 10.1093/gigascience/giac070

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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single B Cell Gene Co-Expression Networks Implicated in Prognosis, Proliferation, and Therapeutic Responses in Non-Small Cell Lung Cancer Bulk Tumors
    1
    1. scibot 12 Jul 2022
      RRID:SCR_014597

      DOI: 10.3390/cancers14133123

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    ncbi.nlm.nih.gov/pmc/articles/PMC9265014/
  48. Jun 2022
  49. 52.53.155.43 52.53.155.43
    cd-21-1022-html.html
    3
    1. scibot 30 Jun 2022
      RRID:SCR_014597

      DOI: 10.1158/2159-8290.CD-21-1022

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    2. scibot 25 Jun 2022
      RRID:SCR_014597

      DOI: 10.1158/2159-8290.cd-21-1022

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    3. scibot 25 Jun 2022
      RRID:SCR_014597

      DOI: 10.1158/2159-8290.cd-21-1022

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    52.53.155.43/dae3a722cb0f412060233d3b16799226aa47507e/cd-21-1022-html.html
  50. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Whole Transcriptome Analysis in Peripheral Blood Suggests That Energy Metabolism and Inflammation Are Involved in Major Depressive Disorder
    1
    1. scibot 01 Jun 2022
      RRID:SCR_014597

      DOI: 10.3389/fpsyt.2022.907034

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    ncbi.nlm.nih.gov/pmc/articles/PMC9136012/
  51. May 2022
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The assembled and annotated genome of the masked palm civet (Paguma larvata)
    1
    1. scibot 21 May 2022
      RRID:SCR_014597

      DOI: 10.1093/gigascience/giac041

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    ncbi.nlm.nih.gov/pmc/articles/PMC9116208/
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deconvoluting mechanisms of acquired resistance to RAF inhibitors in BRAF V600E mutant human glioma
    1
    1. scibot 18 May 2022
      RRID:SCR_014597

      DOI: 10.1158/1078-0432.CCR-21-2660

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    ncbi.nlm.nih.gov/pmc/articles/PMC8595717/
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
    1
    1. scibot 05 May 2022
      RRID:SCR_014597

      DOI: 10.1093/gigascience/giac034

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    Transcriptome Landscape of Human Folliculogenesis Reveals Oocyte and Granulosa Cell Interactions
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  143. Feb 2021
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    Identification of regenerative processes in neonatal spinal cord injury in the opossum (Monodelphis domestica), a transcriptomic study
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    Inverse Data-Driven Modeling and Multiomics Analysis Reveals Phgdh as a Metabolic Checkpoint of Macrophage Polarization and Proliferation
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    Direct reprogramming of oligodendrocyte precursor cells into GABAergic inhibitory neurons by a single homeodomain transcription factor Dlx2
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  148. elifesciences.org elifesciences.org
    Pancreatic progenitor epigenome maps prioritize type 2 diabetes risk genes with roles in development
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  149. Jan 2021
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    The hard clam genome reveals massive expansion and diversification of inhibitors of apoptosis in Bivalvia
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  151. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of the oriental river prawn, Macrobrachium nipponense
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  152. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pituitary stem cells produce paracrine WNT signals to control the expansion of their descendant progenitor cells
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  153. Dec 2020
  154. www.cell.com www.cell.com
    Neuropeptides Modulate Local Astrocytes to Regulate Adult Hippocampal Neural Stem Cells
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  155. academic.oup.com academic.oup.com
    High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis
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    Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation
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  157. Oct 2020
  158. academic.oup.com academic.oup.com
    Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome
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  159. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Differential Effects of Voclosporin and Tacrolimus on Insulin Secretion From Human Islets
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  160. Sep 2020
  161. elifesciences.org elifesciences.org
    A human ESC-based screen identifies a role for the translated lncRNA LINC00261 in pancreatic endocrine differentiation
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  162. www.nature.com www.nature.com
    Lactate production by Staphylococcus aureus biofilm inhibits HDAC11 to reprogramme the host immune response during persistent infection
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  163. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the jellyfish Rhopilema esculentum
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  164. www.sciencedirect.com www.sciencedirect.com
    OsNSUN2-Mediated 5-Methylcytosine mRNA Modification Enhances Rice Adaptation to High Temperature
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  165. www.sciencedirect.com www.sciencedirect.com
    LIM-Homeodomain Transcription Factor LHX4 Is Required for the Differentiation of Retinal Rod Bipolar Cells and OFF-Cone Bipolar Subtypes
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  166. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An improved zebrafish transcriptome annotation for sensitive and comprehensive detection of cell type-specific genes
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    The ESRP1-GPR137 axis contributes to intestinal pathogenesis
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  168. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng
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  169. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Evolution of a plant gene cluster in Solanaceae and emergence of metabolic diversity
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    Molecular pathway analysis towards understanding tissue vulnerability in spinocerebellar ataxia type 1
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    The chromosome-level draft genome of Dalbergia odorifera
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    Cell Type-Specific Intralocus Interactions Reveal Oligodendrocyte Mechanisms in MS
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  174. www.cell.com www.cell.com
    Inverse Data-Driven Modeling and Multiomics Analysis Reveals Phgdh as a Metabolic Checkpoint of Macrophage Polarization and Proliferation
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  175. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Malignant Transformation Involving CXXC4 Mutations Identified in a Leukemic Progression Model of Severe Congenital Neutropenia
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  177. www.microbiologyresearch.org www.microbiologyresearch.org
    Mycoparasitism illuminated by genome and transcriptome sequencing of Coniothyrium minitans, an important biocontrol fungus of the plant pathogen Sclerotinia sclerotiorum
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  178. Jan 2020
  179. academic.oup.com academic.oup.com
    Hybrid de novo genome assembly of Chinese chestnut ( Castanea mollissima )
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  180. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale genome assembly of cucumber (Cucumis sativus L.)
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    Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy ( Coilia nasus ) provides novel insights into migratory adaptation
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    A high-quality genome assembly for the endangered golden snub-nosed monkey (Rhinopithecus roxellana)
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    Lmx1b is required at multiple stages to build expansive serotonergic axon architectures
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  184. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research
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  185. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Receptor-specific interactome as a hub for rapid cue-induced selective translation in axons
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    High-quality Schistosoma haematobium genome achieved by single-molecule and long-range sequencing
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  187. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818)
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  188. elifesciences.org elifesciences.org
    Selective rab11 transport and the intrinsic regenerative ability of CNS axons
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  189. www.sciencedirect.com www.sciencedirect.com
    Activation Dynamics and Immunoglobulin Evolution of Pre-existing and Newly Generated Human Memory B cell Responses to Influenza Hemagglutinin
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    WNT-Mediated Regulation of FOXO1 Constitutes a Critical Axis Maintaining Pubertal Mammary Stem Cell Homeostasis
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  191. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways
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    Transcriptional Feedback Links Lipid Synthesis to Synaptic Vesicle Pools in Drosophila Photoreceptors
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      DOI: 10.1016/j.neuron.2019.01.015

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    Zc3h13 Regulates Nuclear RNA m6A Methylation and Mouse Embryonic Stem Cell Self-Renewal
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    LKB1, Salt-Inducible Kinases, and MEF2C Are Linked Dependencies in Acute Myeloid Leukemia
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    Copper-Binding Small Molecule Induces Oxidative Stress and Cell-Cycle Arrest in Glioblastoma-Patient-Derived Cells
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    RNA Polymerase II Phosphorylated on CTD Serine 5 Interacts with the Spliceosome during Co-transcriptional Splicing
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    The Nuclear Receptor PPARγ Controls Progressive Macrophage Polarization as a Ligand-Insensitive Epigenomic Ratchet of Transcriptional Memory
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    Decoding Transcriptome Dynamics of Genome-Encoded Polyadenylation and Autoregulation with Small-Molecule Modulators of Alternative Polyadenylation
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    HOXA9 Reprograms the Enhancer Landscape to Promote Leukemogenesis
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    Dietary Lipids Modulate Notch Signaling and Influence Adult Intestinal Development and Metabolism in Drosophila
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    Box C/D snoRNP Autoregulation by a cis-Acting snoRNA in the NOP56 Pre-mRNA
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    Overcoming Resistance to Dual Innate Immune and MEK Inhibition Downstream of KRAS
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    Extracellular Matrix Remodeling Regulates Glucose Metabolism through TXNIP Destabilization
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