154 Matching Annotations
  1. Apr 2024
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Snakemake workflows for long-read bacterial genome assembly and evaluation
    1
    1. scibot 10 Apr 2024
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.116

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    ncbi.nlm.nih.gov/pmc/articles/PMC11000499/
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole genome assembly and annotation of the King Angelfish (Holacanthus passer) gives insight into the evolution of marine fishes of the Tropical Eastern Pacific
    1
    1. scibot 03 Apr 2024
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.115

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    ncbi.nlm.nih.gov/pmc/articles/PMC10973836/
  4. Jan 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
    1
    1. scibot 20 Jan 2024
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10795108/
  6. Dec 2023
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
    1. scibot 21 Dec 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  8. Oct 2023
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
    1
    1. scibot 05 Oct 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad079

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    ncbi.nlm.nih.gov/pmc/articles/PMC10541799/
  10. Sep 2023
  11. www.sciencedirect.com www.sciencedirect.com
    Distinct pathways of adaptive evolution in Cryptococcus neoformans reveal a mutation in adenylyl cyclase with trade-offs for pathogenicity
    1
    1. scibot 16 Sep 2023
      RRID:SCR_014731

      DOI: 10.1016/j.cub.2023.08.054

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    sciencedirect.com/science/article/pii/S096098222301134X
  12. Jul 2023
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic analyses provide insights into the evolution and salinity adaptation of halophyte Tamarix chinensis
    1
    1. scibot 29 Jul 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad053

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    ncbi.nlm.nih.gov/pmc/articles/PMC10370455/
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
    1
    1. scibot 25 Jul 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad051

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    ncbi.nlm.nih.gov/pmc/articles/PMC10360393/
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Australasian dingo archetype: de novo chromosome-length genome assembly, DNA methylome, and cranial morphology
    1
    1. scibot 22 Jul 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad018

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    ncbi.nlm.nih.gov/pmc/articles/PMC10353722/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the hybrid grapevine Vitis ‘Chambourcin’
    1
    1. scibot 06 Jul 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.84

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    ncbi.nlm.nih.gov/pmc/articles/PMC10318349/
  17. May 2023
  18. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Whole‐genome assembly and re‐sequencing reveal genomic imprint and key genes of rapid domestication in narrow‐leafed lupin
    1
    1. scibot 05 May 2023
      pilon

      DOI: 10.1111/tpj.15100

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    onlinelibrary.wiley.com/doi/full/10.1111/tpj.15100
  19. Apr 2023
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
    1
    1. scibot 14 Apr 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad023

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    ncbi.nlm.nih.gov/pmc/articles/PMC10087013/
  21. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
    1
    1. scibot 11 Apr 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad022

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
  22. academic.oup.com academic.oup.com
    A chromosome-scale high-contiguity genome assembly of the cheetah (Acinonyx jubatus)
    1
    1. scibot 06 Apr 2023
      RRID:SCR_014731

      DOI: 10.1093/jhered/esad015

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    academic.oup.com/jhered/advance-article/doi/10.1093/jhered/esad015/7069302
  23. Mar 2023
  24. academic.oup.com academic.oup.com
    Resequencing of a Pekin duck breeding population provides insights into the genomic response to short-term artificial selection
    1
    1. scibot 30 Mar 2023
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giad016

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad016/7086661
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of a benthic associated Syngnathiformes species: the common dragonet, Callionymus lyra
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.6

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    ncbi.nlm.nih.gov/pmc/articles/PMC9631949/
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome for the critically endangered woylie, Bettongia penicillata ogilbyi
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.35

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650285/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.34

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the humpback puffer, Tetraodon palembangensis
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.17

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    ncbi.nlm.nih.gov/pmc/articles/PMC9632004/
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read assemblies reveal structural diversity in genomes of organelles – an example with Acacia pycnantha
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.36

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650277/
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly of the common vetch (Vicia sativa) reference genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.38

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650280/
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic features of Mycobacterium avium subsp. hominissuis isolated from pigs in Japan
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.33

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650289/
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly and annotation of the tambaqui (Colossoma macropomum): an emblematic fish of the Amazon River Basin
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.29

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650303/
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Optimizing experimental design for genome sequencing and assembly with Oxford Nanopore Technologies
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.27

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650304/
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.46471/gigabyte.63

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  35. 52.53.155.43 52.53.155.43
    A chromosome-scale reference genome assembly of the great sand eel, Hyperoplus lanceolatus
    1
    1. scibot 02 Mar 2023
      RRID:SCR_014731

      DOI: 10.1093/jhered/esad003

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    52.53.155.43/c66fa9b2ea7c129831e4f3a5d878c6edc0d7a347/esad003-html.html
  36. Feb 2023
  37. www.biorxiv.org www.biorxiv.org
    The Australasian dingo archetype: De novo chromosome-length genome assembly, DNA methylome, and cranial morphology
    1
    1. scibot 23 Feb 2023
      RRID:SCR_014731

      DOI: 10.1101/2023.01.26.525801

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    biorxiv.org/content/10.1101/2023.01.26.525801v1
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An updated version of the Madagascar periwinkle genome
    1
    1. scibot 10 Feb 2023
      RRID:SCR_014731

      DOI: 10.12688/f1000research.129212.1

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    ncbi.nlm.nih.gov/pmc/articles/PMC9902796/
  39. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of goose provides insight into the adaptation and growth of local goose breeds
    1
    1. scibot 08 Feb 2023
      SCR_014731

      DOI: 10.1093/gigascience/giad003

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad003/7025323
  40. www.mdpi.com www.mdpi.com
    Genome Assembly and Comparative Analysis of the Egg Parasitoid Wasp Trichogramma dendrolimi Shed Light on the Composition and Evolution of Olfactory Receptors and Venoms
    1
    1. scibot 04 Feb 2023
      RRID:SCR_014731

      DOI: 10.3390/insects14020144

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    mdpi.com/2075-4450/14/2/144
  41. Jan 2023
  42. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
    1. scibot 20 Jan 2023
      RRID:SCR_014731

      DOI: 10.1101/2023.01.10.523438

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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  43. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome-level genome assembly of Dastarcus helophoroides provides insights into CYP450 genes expression upon insecticide exposure
    1
    1. scibot 10 Jan 2023
      RRID:SCR_014731

      DOI: 10.1002/ps.7319

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    onlinelibrary.wiley.com/doi/10.1002/ps.7319
  44. Dec 2022
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
    1
    1. scibot 30 Dec 2022
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giac112

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    ncbi.nlm.nih.gov/pmc/articles/PMC9795480/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
    1
    1. scibot 16 Dec 2022
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giac120

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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  47. Nov 2022
  48. academic.oup.com academic.oup.com
    The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv
    1
    1. scibot 17 Nov 2022
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giac109

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac109/6827246
  49. academic.oup.com academic.oup.com
    High-quality genome assembles from key Hawaiian coral species
    1
    1. scibot 12 Nov 2022
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giac098

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac098/6815755
  50. Oct 2022
  51. 52.53.155.43 52.53.155.43
    1-s2.0-S2095311922001058-main-html.html
    1
    1. scibot 06 Oct 2022
      RRID:SCR_014731

      DOI: 10.1016/j.jia.2022.08.027

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    52.53.155.43/aaa461132ab556a87a26a7e4f6affb8d35b313ad/1-s2.0-S2095311922001058-main-html.html
  52. Sep 2022
  53. academic.oup.com academic.oup.com
    Comparative genome and evolution analyses of an endangered stony coral species Dendrophyllia cribrosa near Dokdo Islands in the East Sea
    1
    1. scibot 17 Sep 2022
      RRID:SCR_014731

      DOI: 10.1093/gbe/evac132

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    academic.oup.com/gbe/article/14/9/evac132/6677079
  54. academic.oup.com academic.oup.com
    Identification of candidate sex‐specific genomic regions in male and female Asian arowana genomes
    1
    1. scibot 16 Sep 2022
      RRID:SCR_014731

      DOI: 10.1093/gigascience/giac085

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac085/6700067
  55. Aug 2022
  56. www.sciencedirect.com www.sciencedirect.com
    The sage genome provides insight into the evolutionary dynamics of diterpene biosynthesis gene cluster in plants
    1
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      DOI: 10.1016/j.celrep.2022.111236

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  57. Jul 2022
  58. academic.oup.com academic.oup.com
    Chromosome-Level Genome Assembly of the Butter Clam Saxidomus purpuratus
    1
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      DOI: 10.1093/gbe/evac106

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    academic.oup.com/gbe/article/14/7/evac106/6650251
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
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      DOI: 10.1093/gigascience/giac062

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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  60. 52.53.155.43 52.53.155.43
    A chromosome-scale genome assembly of the okapi (Okapia johnstoni)
    1
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      DOI: 10.1093/jhered/esac033

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  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly and annotation of the blue catfish Ictalurus furcatus, an aquaculture species for hybrid catfish reproduction, epigenetics, and heterosis studies
    1
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      DOI: 10.1093/gigascience/giac070

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    ncbi.nlm.nih.gov/pmc/articles/PMC9270728/
  62. Jun 2022
  63. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
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      DOI: 10.1093/gigascience/giac042

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac042/6608506
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction of a new chromosome-scale, long-read reference genome assembly for the Syrian hamster, Mesocricetus auratus
    1
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      DOI: 10.1093/gigascience/giac039

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    ncbi.nlm.nih.gov/pmc/articles/PMC9155146/
  65. May 2022
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The assembled and annotated genome of the masked palm civet (Paguma larvata)
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      DOI: 10.1093/gigascience/giac041

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    ncbi.nlm.nih.gov/pmc/articles/PMC9116208/
  67. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
    1
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      DOI: 10.46471/gigabyte.51

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  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
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  69. Apr 2022
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality assembly reveals genomic characteristics, phylogenetic status, and causal genes for leucism plumage of Indian peafowl
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    ncbi.nlm.nih.gov/pmc/articles/PMC8985102/
  71. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
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    sciencedirect.com/science/article/pii/S2211124722003904
  72. Mar 2022
  73. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
    1
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      DOI: 10.1093/gigascience/giac022

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
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  75. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-quality assembly of the reference genome for scarlet sage, Salvia splendens, an economically important ornamental plant
    1
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    ncbi.nlm.nih.gov/labs/pmc/articles/PMC6030905/
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Fully resolved assembly of Cryptosporidium parvum
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    ncbi.nlm.nih.gov/pmc/articles/PMC8848321/
  77. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome size evolution in the diverse insect order Trichoptera
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  78. Feb 2022
  79. www.sciencedirect.com www.sciencedirect.com
    Whole-genome sequence of the planarian Dugesia japonica combining Illumina and PacBio data
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      DOI: 10.1016/j.ygeno.2022.110293

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    sciencedirect.com/science/article/pii/S0888754322000386
  80. Jan 2022
  81. onlinelibrary.wiley.com onlinelibrary.wiley.com
    A high-quality chromosome-level genome of the endangered roughskin sculpin provides insights into its evolution and adaptation
    1
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      DOI: 10.1111/1755-0998.13582

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  82. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the shuttles hoppfish, Periophthalmus modestus
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      DOI: 10.1093/gigascience/giab089

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab089/6505119
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage map
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    1. scibot 15 Jan 2022
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      DOI: 10.1093/gigascience/giab097

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    ncbi.nlm.nih.gov/pmc/articles/PMC8756199/
  84. Dec 2021
  85. www.mdpi.com www.mdpi.com
    Chromosomal-Level Assembly of Antarctic Scaly Rockcod, Trematomus loennbergii Genome Using Long-Read Sequencing and Chromosome Conformation Capture (Hi-C) Technologies
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    1. scibot 21 Dec 2021
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      DOI: 10.3390/d13120668

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    mdpi.com/1424-2818/13/12/668
  86. Nov 2021
  87. academic.oup.com academic.oup.com
    De novo screening of disease-resistant genes from the chromosome-level genome of rare minnow using CRISPR-cas9 random mutation
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      DOI: 10.1093/gigascience/giab075

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    academic.oup.com/gigascience/article/10/11/giab075/6431779
  88. Oct 2021
  89. academic.oup.com academic.oup.com
    Chromosome-level genome assemblies of Channa argus and Channa maculata and comparative analysis of their temperature adaptability
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    academic.oup.com/gigascience/article/10/10/giab070/6407244
  90. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Genome assembly of the Chinese maize elite inbred line RP125 and its EMS mutant collection provide new resources for maize genetics research and crop improvement
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      DOI: 10.1111/tpj.15421

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  91. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants
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      DOI: 10.7554/eLife.68479

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    ncbi.nlm.nih.gov/pmc/articles/PMC8478411/
  92. Sep 2021
  93. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Uniparental nuclear inheritance following bisexual mating in fungi
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      DOI: 10.7554/eLife.66234

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    ncbi.nlm.nih.gov/pmc/articles/PMC8412948/
  94. Aug 2021
  95. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genome assembly and annotation of yellowhorn (Xanthoceras sorbifolium Bunge)
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      DOI: 10.1093/gigascience/giz071

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    ncbi.nlm.nih.gov/pmc/articles/PMC6593362/
  96. academic.oup.com academic.oup.com
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    academic.oup.com/gigascience/article/8/4/giz023/5429687
  97. academic.oup.com academic.oup.com
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  98. academic.oup.com academic.oup.com
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  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  100. academic.oup.com academic.oup.com
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  101. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  102. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level assembly of Southern catfish (Silurus meridionalis) provides insights into visual adaptation to the nocturnal and benthic lifestyles
    1
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      DOI: 10.1111/1755-0998.13338

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  103. academic.oup.com academic.oup.com
    Chromosome-level genome assembly reveals the unique genome evolution of the swimming crab ( Portunus trituberculatus )
    1
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      DOI: 10.1093/gigascience/giz161

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  104. Jul 2021
  105. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the razor clam Sinonovacula constricta (Lamarck, 1818)
    1
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      DOI: 10.1111/1755-0998.13086

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  106. academic.oup.com academic.oup.com
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  107. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  108. onlinelibrary.wiley.com onlinelibrary.wiley.com
    De Novo Assembly of a Chromosome‐Level Reference Genome of Red Spotted Grouper (Epinephelus akaara) Using Nanopore Sequencing and Hi‐C
    1
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      DOI: 10.1111/1755-0998.13064

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  109. www.mdpi.com www.mdpi.com
    Genome of the Southern Giant Petrel Assembled Using Third-Generation DNA Sequencing and Linked Reads Reveals Evolutionary Traits of Southern Avian
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    1. scibot 16 Jul 2021
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  110. www.authorea.com www.authorea.com
    Chromosome-level genome assembly of the sweet potato weevil, Cylas formicarius (Fabricius) (Coleoptera: Brentidae) and functional characteristics of CforOBP4-6
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  111. Jun 2021
  112. academic.oup.com academic.oup.com
    A hybrid de novo assembly of the sea pansy (Renilla muelleri) genome
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      DOI: 10.1093/gigascience/giz026

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  113. May 2021
  114. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of the Arctic fox (Vulpes lagopus) using PacBio sequencing and Hi‐C technology
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    1. scibot 11 May 2021
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  115. Apr 2021
  116. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the hard-shelled mussel Mytilus coruscus, a widely distributed species from the temperate areas of East Asia
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  117. academic.oup.com academic.oup.com
    A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch
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  118. gigabytejournal.com gigabytejournal.com
    The genome of Tripterygium wilfordii and characterization of the celastrol biosynthesis pathway
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      DOI: 10.46471/gigabyte.14

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  119. academic.oup.com academic.oup.com
    A chromosome-level genome assembly for the Pacific oyster Crassostrea gigas
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  120. Mar 2021
  121. academic.oup.com academic.oup.com
    Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis
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  122. academic.oup.com academic.oup.com
    Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis)
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  123. Feb 2021
  124. academic.oup.com academic.oup.com
    The draft genome sequence of the grove snail Cepaea nemoralis
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      DOI: 10.1093/g3journal/jkaa071

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  125. www.g3journal.org www.g3journal.org
    Construction of Pseudomolecules for the Chinese Chestnut (Castanea mollissima) Genome
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    g3journal.org/content/10/10/3565
  126. Jan 2021
  127. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of the oriental river prawn, Macrobrachium nipponense
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      DOI: 10.1093/gigascience/giaa160

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  128. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals
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      DOI: 10.1093/gigascience/giaa142

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  129. academic.oup.com academic.oup.com
    Chromosome-level reference genome of the European wasp spider Argiope bruennichi: a resource for studies on range expansion and evolutionary adaptation
    1
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  130. academic.oup.com academic.oup.com
    Comparison of long-read methods for sequencing and assembly of a plant genome
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  131. Dec 2020
  132. academic.oup.com academic.oup.com
    Long-read assembly of the Brassica napus reference genome Darmor-bzh
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      DOI: 10.1093/gigascience/giaa137

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  133. academic.oup.com academic.oup.com
    High-quality chromosome-level genome assembly and full-length transcriptome analysis of the pharaoh ant Monomorium pharaonis
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  134. academic.oup.com academic.oup.com
    Genome sequencing of deep-sea hydrothermal vent snails reveals adaptions to extreme environments
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      DOI: 10.1093/gigascience/giaa139

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  135. academic.oup.com academic.oup.com
    Chromosome-level draft genome of a diploid plum (Prunus salicina)
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  136. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Accurate assembly of the olive baboon (Papio anubis) genome using long-read and Hi-C data
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      DOI: 10.1093/gigascience/giaa134

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  137. academic.oup.com academic.oup.com
    Chromosomal genome of Triplophysa bleekeri provides insights into its evolution and environmental adaptation
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  138. Oct 2020
  139. academic.oup.com academic.oup.com
    Pacific Biosciences assembly with Hi-C mapping generates an improved, chromosome-level goose genome
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  140. Sep 2020
  141. academic.oup.com academic.oup.com
    Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
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  142. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng
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      DOI: 10.1093/gigascience/giz164

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  143. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Construction of a chromosome-scale long-read reference genome assembly for potato
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      DOI: 10.1093/gigascience/giaa100

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    pubmed.ncbi.nlm.nih.gov/32964225/
  144. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
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      DOI: 10.1093/gigascience/giaa099

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  145. academic.oup.com academic.oup.com
    The chromosome-level draft genome of Dalbergia odorifera
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    academic.oup.com/gigascience/article/9/8/giaa084/5893771
  146. academic.oup.com academic.oup.com
    CSA: A high-throughput c hromosome- s cale a ssembly pipeline for vertebrate genomes
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  147. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the female western mosquitofish ( Gambusia affinis )
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      DOI: 10.1093/gigascience/giaa092

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  148. academic.oup.com academic.oup.com
    Genomic consequences of dietary diversification and parallel evolution due to nectarivory in leaf-nosed bats
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  149. academic.oup.com academic.oup.com
    Generation of a chromosome-scale genome assembly of the insect-repellent terpenoid-producing Lamiaceae species, Callicarpa americana
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      DOI: 10.1093/gigascience/giaa093

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  150. academic.oup.com academic.oup.com
    Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C
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  151. academic.oup.com academic.oup.com
    De novo assembly of the cattle reference genome with single-molecule sequencing
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  152. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of Aldrichina grahami , a forensically important blowfly
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  153. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Draft Genome of the Asian Buffalo Leech Hirudinaria manillensis
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      DOI: 10.3389/fgene.2019.01321

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  154. academic.oup.com academic.oup.com
    TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads
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      DOI: 10.1093/gigascience/giaa094

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  155. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Chromosome‐level genome assembly of a cyprinid fish Onychostoma macrolepis by integration of Nanopore Sequencing, Bionano and Hi‐C technology
    1
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      DOI: 10.1111/1755-0998.13190

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  156. academic.oup.com academic.oup.com
    Genome sequence of the agarwood tree Aquilaria sinensis (Lour.) Spreng: the first chromosome-level draft genome in the Thymelaeceae family
    1
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      DOI: 10.1093/gigascience/giaa013

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    Chromosome-level genome assembly and annotation of the loquat ( Eriobotrya japonica ) genome
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    Genome sequence of the Chinese white wax scale insect Ericerus pela : the first draft genome for the Coccidae family of scale insects
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    Chromosome-scale assembly comparison of the Korean Reference Genome KOREF from PromethION and PacBio with Hi-C mapping information
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    The draft genome sequence of the spider Dysdera silvatica (Araneae, Dysderidae): A valuable resource for functional and evolutionary genomic studies in chelicerates
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    Genome and population sequencing of a chromosome-level genome assembly of the Chinese tapertail anchovy ( Coilia nasus ) provides novel insights into migratory adaptation
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    The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies
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    Pseudomolecule-level assembly of the Chinese oil tree yellowhorn (Xanthoceras sorbifolium) genome
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    A high-quality genome assembly for the endangered golden snub-nosed monkey (Rhinopithecus roxellana)
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    De novo genome assembly of the endangered Acer yangbiense , a plant species with extremely small populations endemic to Yunnan Province, China
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    Chromosomal-level reference genome of Chinese peacock butterfly ( Papilio bianor ) based on third-generation DNA sequencing and Hi-C analysis
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    Chromosomal-level assembly of the blood clam, Scapharca ( Anadara ) broughtonii , using long sequence reads and Hi-C
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    A chromosome-level draft genome of the grain aphid Sitobion miscanthi
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  170. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-scale genome assembly of cucumber (Cucumis sativus L.)
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    Common workflow language (CWL)-based software pipeline for de novo genome assembly from long- and short-read data
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    De novo genome assembly of the white-spotted flower chafer (Protaetia brevitarsis)
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  177. academic.oup.com academic.oup.com
    A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways
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  180. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale genome assembly of kiwifruit Actinidia eriantha with single-molecule sequencing and chromatin interaction mapping
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  181. Nov 2018
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  188. academic.oup.com academic.oup.com
    Improved de novo genome assembly and analysis of the Chinese cucurbit Siraitia grosvenorii, also known as monk fruit or luo-han-guo
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  193. Nov 2017
  194. elifesciences.org elifesciences.org
    A large gene family in fission yeast encodes spore killers that subvert Mendel’s law
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  195. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A molecular portrait of maternal sepsis from Byzantine Troy
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