37 Matching Annotations
  1. Jan 2026
  2. elifesciences.org elifesciences.org
    Neisseria gonorrhoeae LIN codes provide a robust, multi-resolution lineage nomenclature
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    elifesciences.org/articles/107758
  3. Nov 2025
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Metabolomics and metagenomics in mice reveal the role of the gut microbiota in tryptophan metabolism
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    pmc.ncbi.nlm.nih.gov/articles/PMC12606010/
  5. Oct 2025
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Integrated multi-omics highlights alterations of gut microbiome functions in prodromal and idiopathic Parkinson’s disease
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    pmc.ncbi.nlm.nih.gov/articles/PMC12502400/
  7. Aug 2025
  8. www.sciencedirect.com www.sciencedirect.com
    Bronze Age Yersinia pestis genome from sheep sheds light on hosts and evolution of a prehistoric plague lineage
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    sciencedirect.com/science/article/pii/S0092867425008517
  9. Jul 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Identifying genetic variations in emm89 Streptococcus pyogenes associated with severe invasive infections
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    pmc.ncbi.nlm.nih.gov/articles/PMC12289306/
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Human gut microbiome gene co-expression network reveals a loss in taxonomic and functional diversity in Parkinson’s disease
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    pmc.ncbi.nlm.nih.gov/articles/PMC12289924/
  12. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Distinct adaptation and epidemiological success of different genotypes within Salmonella enterica serovar Dublin
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    pmc.ncbi.nlm.nih.gov/articles/PMC12194135/
  13. May 2025
  14. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Efficiently constructing complete genomes with CycloneSEQ to fill gaps in bacterial draft assemblies
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    pmc.ncbi.nlm.nih.gov/articles/PMC12051259/
  15. Apr 2025
  16. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Control of pili synthesis and putrescine homeostasis in Escherichia coli
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    pmc.ncbi.nlm.nih.gov/articles/PMC11968103/
  17. Feb 2025
  18. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The nisin O cluster: species dissemination, candidate leader peptide proteases and the role of regulatory systems
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    pmc.ncbi.nlm.nih.gov/articles/PMC11811420/
  19. Jan 2025
  20. f1000research.com f1000research.com
    F1000Research Article: Isolation and complete genome sequence of <i>Citrobacter </i>bacteriophage Ursula.
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    f1000research.com/articles/14-86
  21. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Diaci v3.0: chromosome-level assembly, de novo transcriptome, and manual annotation of Diaphorina citri, insect vector of Huanglongbing
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    pmc.ncbi.nlm.nih.gov/articles/PMC11659978/
  22. Sep 2024
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Isolation and complete genome sequence of Aeromonas bacteriophage Gekk3-15
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    ncbi.nlm.nih.gov/pmc/articles/PMC11372344/
  24. Aug 2024
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    MOBFinder: a tool for mobilization typing of plasmid metagenomic fragments based on a language model
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299106/
  26. Jul 2023
  27. www.sciencedirect.com www.sciencedirect.com
    Bacterial clade-specific analysis identifies distinct epithelial responses in inflammatory bowel disease
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    sciencedirect.com/science/article/pii/S2666379123002525
  28. Feb 2023
  29. www.sciencedirect.com www.sciencedirect.com
    A reversible mutation in a genomic hotspot saves bacterial swarms from extinction
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    sciencedirect.com/science/article/pii/S2589004223001207
  30. Jan 2023
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera
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    ncbi.nlm.nih.gov/pmc/articles/PMC9868349/
  32. Sep 2022
  33. www.sciencedirect.com www.sciencedirect.com
    Human gut microbiota stimulate defined innate immune responses that vary from phylum to strain
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    sciencedirect.com/science/article/pii/S1931312822004085
  34. Aug 2022
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Antibiotic resistance genes are differentially mobilized according to resistance mechanism
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    ncbi.nlm.nih.gov/pmc/articles/PMC9338424/
  36. May 2022
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Global Phylogeny of Mycobacterium avium and Identification of Mutation Hotspots During Niche Adaptation
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    ncbi.nlm.nih.gov/pmc/articles/PMC9121174/
  38. Jan 2022
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Pan-genome analysis identifies intersecting roles for Pseudomonas specialized metabolites in potato pathogen inhibition
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    ncbi.nlm.nih.gov/pmc/articles/PMC8719888/
  40. Aug 2021
  41. 52.53.155.43 52.53.155.43
    94172714-ec33-4f50-8b23-1d03da9cfcd8_54402_-_jamsari_jamsari-html.html
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    52.53.155.43/661e8aeddc364c3b13e5dbe6d1443ea062c269c5/94172714-ec33-4f50-8b23-1d03da9cfcd8_54402_-_jamsari_jamsari-html.html
  42. academic.oup.com academic.oup.com
    Untitled document
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    academic.oup.com/gigascience/article/8/4/giz033/5429686
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6175580/
  44. Jul 2021
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A molecular portrait of maternal sepsis from Byzantine Troy
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    ncbi.nlm.nih.gov/pmc/articles/PMC5224923/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy
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    ncbi.nlm.nih.gov/pmc/articles/PMC8241443/
  47. May 2021
  48. www.sciencedirect.com www.sciencedirect.com
    Gut vascular barrier impairment leads to intestinal bacteria dissemination and colorectal cancer metastasis to liver
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    sciencedirect.com/science/article/pii/S1535610821001628
  49. Mar 2021
  50. www.frontiersin.org www.frontiersin.org
    Comparative Genomics of Mycobacterium avium Subspecies Paratuberculosis Sheep Strains
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    frontiersin.org/article/10.3389/fvets.2021.637637/full
  51. www.frontiersin.org www.frontiersin.org
    Phylogenetic Revision of the Genus Aliivibrio: Intra- and Inter-Species Variance Among Clusters Suggest a Wider Diversity of Species
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    frontiersin.org/article/10.3389/fmicb.2021.626759/full
  52. Nov 2020
  53. www.frontiersin.org www.frontiersin.org
    Employing MIC Data for Mink Pathogens to Propose Tentative Epidemiological Cut-Off Values: A Step Toward Rationalizing Antimicrobial Use in Mink
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    frontiersin.org/article/10.3389/fvets.2020.544594/full
  54. Sep 2020
  55. www.sciencedirect.com www.sciencedirect.com
    Acquisition and Adaptation of Ultra-small Parasitic Reduced Genome Bacteria to Mammalian Hosts
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    sciencedirect.com/science/article/pii/S2211124720309207
  56. www.sciencedirect.com www.sciencedirect.com
    Functional and Genomic Variation between Human-Derived Isolates of Lachnospiraceae Reveals Inter- and Intra-Species Diversity
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    sciencedirect.com/science/article/pii/S1931312820302870
  57. Jan 2020
  58. www.sciencedirect.com www.sciencedirect.com
    Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome
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    sciencedirect.com/science/article/pii/S009286741931164X
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6451198/