46 Matching Annotations
  1. Dec 2024
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome provides insights into the evolution of specialized centromere sequences in sandalwood
    1
    1. scibot 13 Dec 2024
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giae096

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    pmc.ncbi.nlm.nih.gov/articles/PMC11633456/
  3. Nov 2024
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    CannSeek? Yes we Can! An open-source single nucleotide polymorphism database and analysis portal for Cannabis sativa
    1
    1. scibot 07 Nov 2024
      RRID:SCR_015501

      DOI: 10.46471/gigabyte.135

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    pmc.ncbi.nlm.nih.gov/articles/PMC11480739/
  5. Sep 2024
  6. www.sciencedirect.com www.sciencedirect.com
    Genomic surveillance as a scalable framework for precision phage therapy against antibiotic-resistant pathogens
    1
    1. scibot 27 Sep 2024
      RRID:SCR_015501

      DOI: 10.1016/j.cell.2024.09.009

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    sciencedirect.com/science/article/pii/S0092867424010274
  7. Aug 2024
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of 5 underutilized Papilionoideae crops provide insights into root nodulation and disease resistance
    1
    1. scibot 29 Aug 2024
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giae063

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    ncbi.nlm.nih.gov/pmc/articles/PMC11348429/
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Age-associated temporal decline in butyrate-producing bacteria plays a key pathogenic role in the onset and progression of neuropathology and memory deficits in 3×Tg-AD mice
    1
    1. scibot 28 Aug 2024
      RRID:SCR_015501

      DOI: 10.1080/19490976.2024.2389319

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    ncbi.nlm.nih.gov/pmc/articles/PMC11346541/
  10. Jul 2024
  11. www.biorxiv.org www.biorxiv.org
    Evolutionary Dynamics of Lineage-Specific Class-A GPCR Subsets Reveal Widespread Chemosensory Roles and Adaptations in Lophotrochozoa
    1
    1. scibot 23 Jul 2024
      RRID:SCR_015501

      DOI: 10.1101/2024.07.14.603414

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    biorxiv.org/content/10.1101/2024.07.14.603414v1
  12. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Cellular-resolution gene expression mapping reveals organization in the head ganglia of the gastropod, Berghia stephanieae
    1
    1. scibot 18 Jul 2024
      RRID:SCR_015501

      DOI: 10.1002/cne.25628

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    onlinelibrary.wiley.com/doi/10.1002/cne.25628
  13. www.biorxiv.org www.biorxiv.org
    PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
    1
    1. scibot 16 Jul 2024
      RRID:SCR_015501

      DOI: 10.1101/2024.06.26.600753

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    biorxiv.org/content/10.1101/2024.06.26.600753v1
  14. Mar 2024
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome of Commelinales provides insights into the commelinids evolution and global spread of water hyacinth (Pontederia crassipes)
    1
    1. scibot 16 Mar 2024
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giae006

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    ncbi.nlm.nih.gov/pmc/articles/PMC10938897/
  16. Feb 2024
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gut microbiota non-convergence and adaptations in sympatric Tibetan and Przewalski's gazelles
    1
    1. scibot 28 Feb 2024
      RRID:SCR_015501

      DOI: 10.1016/j.isci.2024.109117

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    ncbi.nlm.nih.gov/pmc/articles/PMC10879710/
  18. Oct 2023
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
    1
    1. scibot 28 Oct 2023
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giad090

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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  20. Sep 2023
  21. www.sciencedirect.com www.sciencedirect.com
    Mechanism and evolutionary origins of alanine-tail C-degron recognition by E3 ligases Pirh2 and CRL2-KLHDC10
    1
    1. scibot 08 Sep 2023
      SCR_015501

      DOI: 10.1016/j.celrep.2023.113100

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    sciencedirect.com/science/article/pii/S2211124723011117
  22. Jul 2023
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An initial genomic blueprint of the healthy human oesophageal microbiome
    1
    1. scibot 08 Jul 2023
      RRID:SCR_015501

      DOI: 10.1099/acmi.0.000558.v3

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    ncbi.nlm.nih.gov/pmc/articles/PMC10323806/
  24. Mar 2023
  25. academic.oup.com academic.oup.com
    New biochemistry in the Rhodanese-phosphatase superfamily: emerging roles in diverse metabolic processes, nucleic acid modifications, and biological conflicts
    1
    1. scibot 29 Mar 2023
      RRID:SCR_015501

      DOI: 10.1093/nargab/lqad029

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    academic.oup.com/nargab/article/5/1/lqad029/7084609
  26. Jan 2023
  27. www.nature.com www.nature.com
    A chromosome-level genome assembly of Plantago ovata
    1
    1. scibot 31 Jan 2023
      RRID:SCR_015501

      DOI: 10.1038/s41598-022-25078-5

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    nature.com/articles/s41598-022-25078-5
  28. Nov 2022
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Antibacterial T6SS effectors with a VRR-Nuc domain are structure-specific nucleases
    1
    1. scibot 09 Nov 2022
      RRID:SCR_015501

      DOI: 10.7554/eLife.82437

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    ncbi.nlm.nih.gov/pmc/articles/PMC9635880/
  30. Aug 2022
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The evolution of a counter-defense mechanism in a virus constrains its host range
    1
    1. scibot 26 Aug 2022
      RRID:SCR_015501

      DOI: 10.7554/eLife.79549

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    ncbi.nlm.nih.gov/pmc/articles/PMC9391042/
  32. Jul 2022
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
    1. scibot 27 Jul 2022
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giac062

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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  34. Mar 2022
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
    1
    1. scibot 18 Mar 2022
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giac021

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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  36. Feb 2022
  37. www.sciencedirect.com www.sciencedirect.com
    TreeTuner: A pipeline for minimizing redundancy and complexity in large phylogenetic datasets
    1
    1. scibot 16 Feb 2022
      SCR_015501

      DOI: 10.1016/j.xpro.2022.101175

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    sciencedirect.com/science/article/pii/S2666166722000557
  38. Jan 2022
  39. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
    1
    1. scibot 12 Jan 2022
      RRID:SCR_015501

      DOI: 10.1002/yea.3688

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    onlinelibrary.wiley.com/doi/10.1002/yea.3688
  40. Aug 2021
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    1. scibot 02 Aug 2021
      RRID:SCR_015501

      DOI: 10.1016/j.cub.2018.08.041

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    ncbi.nlm.nih.gov/pmc/articles/PMC6224481/
  42. Jul 2021
  43. elifesciences.org elifesciences.org
    Apicomplexan-like parasites are polyphyletic and widely but selectively dependent on cryptic plastid organelles
    1
    1. scibot 30 Jul 2021
      Fasttree

      DOI: 10.7554/eLife.49662

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    elifesciences.org/articles/49662
  44. www.microbiologyresearch.org www.microbiologyresearch.org
    Detection and characterization of a novel bat-borne coronavirus in Singapore using multiple molecular approaches
    1
    1. scibot 29 Jul 2021
      FastTree

      DOI: 10.1099/jgv.0.001307

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    microbiologyresearch.org/content/journal/jgv/10.1099/jgv.0.001307
  45. Jun 2021
  46. elifesciences.org elifesciences.org
    Myoglobin primary structure reveals multiple convergent transitions to semi-aquatic life in the world's smallest mammalian divers
    1
    1. scibot 18 Jun 2021
      RRID:SCR_015501

      DOI: 10.7554/eLife.66797

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    elifesciences.org/articles/66797
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Bacterial death and TRADD-N domains help define novel apoptosis and immunity mechanisms shared by prokaryotes and metazoans
    1
    1. scibot 17 Jun 2021
      RRID:SCR_015501

      DOI: 10.7554/eLife.70394

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    ncbi.nlm.nih.gov/pmc/articles/PMC8195603/
  48. May 2021
  49. jb.asm.org jb.asm.org
    Identification of uncharacterized components of prokaryotic immune systems and their diverse eukaryotic reformulations
    1
    1. scibot 10 May 2021
      RRID:SCR_015501

      DOI: 10.1128/JB.00365-20

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    jb.asm.org/content/202/24/e00365-20
  50. Mar 2021
  51. academic.oup.com academic.oup.com
    Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis)
    1
    1. scibot 18 Mar 2021
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giab013

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    academic.oup.com/gigascience/article/10/3/giab013/6168810
  52. academic.oup.com academic.oup.com
    Comparative analysis of 7 short-read sequencing platforms using the Korean Reference Genome: MGI and Illumina sequencing benchmark for whole-genome sequencing
    1
    1. scibot 18 Mar 2021
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giab014

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    academic.oup.com/gigascience/article/10/3/giab014/6168811
  53. Jan 2021
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Jumbo Phages: A Comparative Genomic Overview of Core Functions and Adaptions for Biological Conflicts
    1
    1. scibot 26 Jan 2021
      RRID:SCR_015501

      DOI: 10.3390/v13010063

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    ncbi.nlm.nih.gov/pmc/articles/PMC7824862/
  55. Sep 2020
  56. www.frontiersin.org www.frontiersin.org
    Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum
    1
    1. scibot 25 Sep 2020
      RRID:SCR_015501

      DOI: 10.3389/fgene.2020.00034

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    frontiersin.org/articles/10.3389/fgene.2020.00034/full
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng
    1
    1. scibot 17 Sep 2020
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giz164

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    ncbi.nlm.nih.gov/pmc/articles/PMC6964648/
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Highly regulated, diversifying NTP-dependent biological conflict systems with implications for the emergence of multicellularity
    1
    1. scibot 14 Sep 2020
      RRID:SCR_015501

      DOI: 10.7554/eLife.52696

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    ncbi.nlm.nih.gov/pmc/articles/PMC7159879/
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structures of Human Antibodies Bound to SARS-CoV-2 Spike Reveal Common Epitopes and Recurrent Features of Antibodies
    1
    1. scibot 10 Sep 2020
      RRID:SCR_015501

      DOI: 10.1016/j.cell.2020.06.025

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    ncbi.nlm.nih.gov/pmc/articles/PMC7311918/
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Local frustration determines loop opening during the catalytic cycle of an oxidoreductase
    1
    1. scibot 07 Sep 2020
      RRID:SCR_015501

      DOI: 10.7554/eLife.54661

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    ncbi.nlm.nih.gov/pmc/articles/PMC7347389/
  61. Jan 2020
  62. academic.oup.com academic.oup.com
    Systematic processing of ribosomal RNA gene amplicon sequencing data
    1
    1. scibot 13 Jan 2020
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giz146

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    academic.oup.com/gigascience/article/8/12/giz146/5670612
  63. www.sciencedirect.com www.sciencedirect.com
    Rapid and Focused Maturation of a VRC01-Class HIV Broadly Neutralizing Antibody Lineage Involves Both Binding and Accommodation of the N276-Glycan
    1
    1. scibot 13 Jan 2020
      RRID:SCR_015501

      DOI: 10.1016/j.immuni.2019.06.004

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      Curator: @ethanbadger

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    sciencedirect.com/science/article/pii/S1074761319302493
  64. academic.oup.com academic.oup.com
    Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome
    1
    1. scibot 13 Jan 2020
      RRID:SCR_015501

      DOI: 10.1093/gigascience/giz115

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    academic.oup.com/gigascience/article/8/10/giz115/5579996
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nitric oxide radicals are emitted by wasp eggs to kill mold fungi
    1
    1. scibot 13 Jan 2020
      RRID:SCR_015501

      DOI: 10.7554/eLife.43718

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    ncbi.nlm.nih.gov/pmc/articles/PMC6559793/
  66. Nov 2018
  67. www.sciencedirect.com www.sciencedirect.com
    Untitled document
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    1. scibot 05 Nov 2018
      RRID:SCR_015501

      Curator: @Jmenke

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      RRID:SCR_015501 RRIDCUR:Validated
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    sciencedirect.com/science/article/pii/S0960982218311254
  68. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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    1. scibot 05 Nov 2018
      RRID:SCR_015501

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      RRID:SCR_015501
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    sciencedirect.com/science/article/pii/S0960982218308182
  69. elifesciences.org elifesciences.org
    Untitled document
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    1. scibot 05 Nov 2018
      RRID:SCR_015501

      Curator: @evieth

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      RRID:SCR_015501 RRIDCUR:Validated
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    elifesciences.org/articles/31529
  70. www.sciencedirect.com www.sciencedirect.com
    HIV Envelope Glycoform Heterogeneity and Localized Diversity Govern the Initiation and Maturation of a V2 Apex Broadly Neutralizing Antibody Lineage
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    1. scibot 05 Nov 2018
      RRID:SCR_015501

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    sciencedirect.com/science/article/pii/S107476131730479X
  71. Nov 2017
  72. elifesciences.org elifesciences.org
    Genome-wide identification of lineage and locus specific variation associated with pneumococcal carriage duration
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    1. scibot 08 Nov 2017
      RRID:SCR_015501

      Curator: @kaitlinsung

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      RRID:SCR_015501 RRIDCUR:Validated
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    elifesciences.org/articles/26255
  73. www.sciencedirect.com www.sciencedirect.com
    Diabetes Enhances IL-17 Expression and Alters the Oral Microbiome to Increase Its Pathogenicity
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    1. scibot 08 Nov 2017
      FastTree

      Curator: @chewbeccax

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      RRID:SCR_015501 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S1931312817302548
  74. www.sciencedirect.com www.sciencedirect.com
    Novel Predators Reshape Holozoan Phylogeny and Reveal the Presence of a Two-Component Signaling System in the Ancestor of Animals
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    1. scibot 08 Nov 2017
      FastTree

      Curator: @chewbeccax

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      (FastTree, RRID:SCR_015501)

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      RRID:SCR_015501 RRIDCUR:Missing
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    sciencedirect.com/science/article/pii/S0960982217307078