56 Matching Annotations
  1. Jan 2026
  2. elifesciences.org elifesciences.org
    Neisseria gonorrhoeae LIN codes provide a robust, multi-resolution lineage nomenclature
    1
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    elifesciences.org/articles/107758
  3. Oct 2025
  4. www.sciencedirect.com www.sciencedirect.com
    The genomic footprints of wild Saccharum species trace domestication, diversification, and modern breeding of sugarcane
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    sciencedirect.com/science/article/pii/S0092867425010852
  5. Sep 2025
  6. www.sciencedirect.com www.sciencedirect.com
    An HIV fusion-inhibitory lipopeptide provides robust post-exposure prophylaxis and prevents viral reservoir seeding in macaques
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    sciencedirect.com/science/article/pii/S2211124725009994
  7. Jun 2025
  8. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Impact of toothpaste use on the subgingival microbiome: a pilot randomized clinical trial
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12125941/
  9. Apr 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Unveiling the structural and functional implications of uncharacterized NSPs and variations in the molecular toolkit across arteriviruses
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11983283/
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Complementary Ribo-seq approaches map the translatome and provide a small protein census in the foodborne pathogen Campylobacter jejuni
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11955535/
  12. Mar 2025
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Lineage-Specific Class-A GPCR Dynamics Reflect Diverse Chemosensory Adaptations in Lophotrochozoa
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    pmc.ncbi.nlm.nih.gov/articles/PMC11886862/
  14. Feb 2025
  15. aacrjournals.org aacrjournals.org
    Inflammation mediated by gut microbiome alterations promotes lung cancer development and an immunosuppressed tumor microenvironment
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    aacrjournals.org/cancerimmunolres/article/12/12/1736/750301/Inflammation-Mediated-by-Gut-Microbiome
  16. www.sciencedirect.com www.sciencedirect.com
    Pre-exposure to stress reduces loss of community and genetic diversity following severe environmental disturbance
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    sciencedirect.com/science/article/pii/S0960982225000673
  17. Jan 2025
  18. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A chromosome-scale genome assembly of the pioneer plant Stylosanthes angustifolia: insights into genome evolution and drought adaptation
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    pmc.ncbi.nlm.nih.gov/articles/PMC11758145/
  19. Dec 2024
  20. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome provides insights into the evolution of specialized centromere sequences in sandalwood
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11633456/
  21. Nov 2024
  22. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    CannSeek? Yes we Can! An open-source single nucleotide polymorphism database and analysis portal for Cannabis sativa
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11480739/
  23. Sep 2024
  24. www.sciencedirect.com www.sciencedirect.com
    Genomic surveillance as a scalable framework for precision phage therapy against antibiotic-resistant pathogens
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    sciencedirect.com/science/article/pii/S0092867424010274
  25. Aug 2024
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of 5 underutilized Papilionoideae crops provide insights into root nodulation and disease resistance
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11348429/
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Age-associated temporal decline in butyrate-producing bacteria plays a key pathogenic role in the onset and progression of neuropathology and memory deficits in 3×Tg-AD mice
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11346541/
  28. Jul 2024
  29. www.biorxiv.org www.biorxiv.org
    Evolutionary Dynamics of Lineage-Specific Class-A GPCR Subsets Reveal Widespread Chemosensory Roles and Adaptations in Lophotrochozoa
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    biorxiv.org/content/10.1101/2024.07.14.603414v1
  30. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Cellular-resolution gene expression mapping reveals organization in the head ganglia of the gastropod, Berghia stephanieae
    1
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    onlinelibrary.wiley.com/doi/10.1002/cne.25628
  31. www.biorxiv.org www.biorxiv.org
    PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
    1
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    biorxiv.org/content/10.1101/2024.06.26.600753v2
  32. Mar 2024
  33. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference genome of Commelinales provides insights into the commelinids evolution and global spread of water hyacinth (Pontederia crassipes)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10938897/
  34. Feb 2024
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gut microbiota non-convergence and adaptations in sympatric Tibetan and Przewalski's gazelles
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10879710/
  36. Oct 2023
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  38. Sep 2023
  39. www.sciencedirect.com www.sciencedirect.com
    Mechanism and evolutionary origins of alanine-tail C-degron recognition by E3 ligases Pirh2 and CRL2-KLHDC10
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    sciencedirect.com/science/article/pii/S2211124723011117
  40. Jul 2023
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An initial genomic blueprint of the healthy human oesophageal microbiome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10323806/
  42. Mar 2023
  43. academic.oup.com academic.oup.com
    New biochemistry in the Rhodanese-phosphatase superfamily: emerging roles in diverse metabolic processes, nucleic acid modifications, and biological conflicts
    1
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    academic.oup.com/nargab/article/5/1/lqad029/7084609
  44. Jan 2023
  45. www.nature.com www.nature.com
    A chromosome-level genome assembly of Plantago ovata
    1
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    nature.com/articles/s41598-022-25078-5
  46. Nov 2022
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Antibacterial T6SS effectors with a VRR-Nuc domain are structure-specific nucleases
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9635880/
  48. Aug 2022
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The evolution of a counter-defense mechanism in a virus constrains its host range
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9391042/
  50. Jul 2022
  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  52. Mar 2022
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8917513/
  54. Feb 2022
  55. www.sciencedirect.com www.sciencedirect.com
    TreeTuner: A pipeline for minimizing redundancy and complexity in large phylogenetic datasets
    1
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    sciencedirect.com/science/article/pii/S2666166722000557
  56. Jan 2022
  57. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Highly diverged lineages of Saccharomyces paradoxus in temperate to subtropical climate zones in China
    1
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    onlinelibrary.wiley.com/doi/10.1002/yea.3688
  58. Aug 2021
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Untitled document
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    ncbi.nlm.nih.gov/pmc/articles/PMC6224481/
  60. Jul 2021
  61. elifesciences.org elifesciences.org
    Apicomplexan-like parasites are polyphyletic and widely but selectively dependent on cryptic plastid organelles
    1
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    elifesciences.org/articles/49662
  62. www.microbiologyresearch.org www.microbiologyresearch.org
    Detection and characterization of a novel bat-borne coronavirus in Singapore using multiple molecular approaches
    1
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    microbiologyresearch.org/content/journal/jgv/10.1099/jgv.0.001307
  63. Jun 2021
  64. elifesciences.org elifesciences.org
    Myoglobin primary structure reveals multiple convergent transitions to semi-aquatic life in the world's smallest mammalian divers
    1
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    elifesciences.org/articles/66797
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Bacterial death and TRADD-N domains help define novel apoptosis and immunity mechanisms shared by prokaryotes and metazoans
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    ncbi.nlm.nih.gov/pmc/articles/PMC8195603/
  66. May 2021
  67. jb.asm.org jb.asm.org
    Identification of uncharacterized components of prokaryotic immune systems and their diverse eukaryotic reformulations
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    jb.asm.org/content/202/24/e00365-20
  68. Mar 2021
  69. academic.oup.com academic.oup.com
    Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis)
    1
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    academic.oup.com/gigascience/article/10/3/giab013/6168810
  70. academic.oup.com academic.oup.com
    Comparative analysis of 7 short-read sequencing platforms using the Korean Reference Genome: MGI and Illumina sequencing benchmark for whole-genome sequencing
    1
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    academic.oup.com/gigascience/article/10/3/giab014/6168811
  71. Jan 2021
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Jumbo Phages: A Comparative Genomic Overview of Core Functions and Adaptions for Biological Conflicts
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC7824862/
  73. Sep 2020
  74. www.frontiersin.org www.frontiersin.org
    Functional Innovation in the Evolution of the Calcium-Dependent System of the Eukaryotic Endoplasmic Reticulum
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    frontiersin.org/articles/10.3389/fgene.2020.00034/full
  75. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Chromosomal Genome Assembly of Diospyros oleiferaCheng
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC6964648/
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Highly regulated, diversifying NTP-dependent biological conflict systems with implications for the emergence of multicellularity
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC7159879/
  77. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structures of Human Antibodies Bound to SARS-CoV-2 Spike Reveal Common Epitopes and Recurrent Features of Antibodies
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC7311918/
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Local frustration determines loop opening during the catalytic cycle of an oxidoreductase
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC7347389/
  79. Jan 2020
  80. academic.oup.com academic.oup.com
    Systematic processing of ribosomal RNA gene amplicon sequencing data
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    academic.oup.com/gigascience/article/8/12/giz146/5670612
  81. www.sciencedirect.com www.sciencedirect.com
    Rapid and Focused Maturation of a VRC01-Class HIV Broadly Neutralizing Antibody Lineage Involves Both Binding and Accommodation of the N276-Glycan
    1
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    sciencedirect.com/science/article/pii/S1074761319302493
  82. academic.oup.com academic.oup.com
    Draft genome sequence of Solanum aethiopicum provides insights into disease resistance, drought tolerance, and the evolution of the genome
    1
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    academic.oup.com/gigascience/article/8/10/giz115/5579996
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nitric oxide radicals are emitted by wasp eggs to kill mold fungi
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC6559793/
  84. Nov 2018
  85. www.sciencedirect.com www.sciencedirect.com
    Untitled document
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    sciencedirect.com/science/article/pii/S0960982218311254
  86. www.sciencedirect.com www.sciencedirect.com
    A Novel Eukaryotic Denitrification Pathway in Foraminifera
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    sciencedirect.com/science/article/pii/S0960982218308182
  87. elifesciences.org elifesciences.org
    Untitled document
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    elifesciences.org/articles/31529
  88. www.sciencedirect.com www.sciencedirect.com
    HIV Envelope Glycoform Heterogeneity and Localized Diversity Govern the Initiation and Maturation of a V2 Apex Broadly Neutralizing Antibody Lineage
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    sciencedirect.com/science/article/pii/S107476131730479X
  89. Nov 2017
  90. elifesciences.org elifesciences.org
    Genome-wide identification of lineage and locus specific variation associated with pneumococcal carriage duration
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    elifesciences.org/articles/26255
  91. www.sciencedirect.com www.sciencedirect.com
    Diabetes Enhances IL-17 Expression and Alters the Oral Microbiome to Increase Its Pathogenicity
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    sciencedirect.com/science/article/pii/S1931312817302548
  92. www.sciencedirect.com www.sciencedirect.com
    Novel Predators Reshape Holozoan Phylogeny and Reveal the Presence of a Two-Component Signaling System in the Ancestor of Animals
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    sciencedirect.com/science/article/pii/S0960982217307078