779 Matching Annotations
  1. Dec 2020
  2. www.cell.com www.cell.com
    Lineage-Resolved Enhancer and Promoter Usage during a Time Course of Embryogenesis
    1
    1. scibot 10 Dec 2020
      RRID:SCR_015687

      DOI: 10.1016/j.devcel.2020.10.009

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    cell.com/developmental-cell/fulltext/S1534-5807(20)30799-1
  3. www.sciencedirect.com www.sciencedirect.com
    Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact
    1
    1. scibot 07 Dec 2020
      RRID:SCR_01568

      DOI: 10.1016/j.cell.2020.11.002

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    sciencedirect.com/science/article/pii/S0092867420314616
  4. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Turnip mosaic virus in oilseed rape activates networks of sRNA-mediated interactions between viral and host genomes
    1
    1. scibot 07 Dec 2020
      RRID:SCR_015687

      DOI: 10.1038/s42003-020-01425-y

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    pubmed.ncbi.nlm.nih.gov/33230160/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High neural activity accelerates the decline of cognitive plasticity with age in Caenorhabditis elegans
    1
    1. scibot 07 Dec 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.59711

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    ncbi.nlm.nih.gov/pmc/articles/PMC7685709/
  6. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    16p11.2 microdeletion imparts transcriptional alterations in human iPSC-derived models of early neural development
    1
    1. scibot 07 Dec 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.58178

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    ncbi.nlm.nih.gov/pmc/articles/PMC7695459/
  7. Nov 2020
  8. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Novel circular RNA 2960 contributes to secondary damage of spinal cord injury by sponging miRNA‐124
    1
    1. scibot 27 Nov 2020
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      DOI: 10.1002/cne.25030

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    onlinelibrary.wiley.com/doi/10.1002/cne.25030
  9. elifesciences.org elifesciences.org
    GTPBP1 resolves paused ribosomes to maintain neuronal homeostasis
    1
    1. scibot 21 Nov 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.62731

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    elifesciences.org/articles/62731
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Reprogramming of bone marrow myeloid progenitor cells in patients with severe coronary artery disease
    1
    1. scibot 21 Nov 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.60939

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    ncbi.nlm.nih.gov/pmc/articles/PMC7665893/
  11. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Three-Dimensional Human Alveolar Stem Cell Culture Models Reveal Infection Response to SARS-CoV-2
    1
    1. scibot 04 Nov 2020
      RRID:SCR_015687

      DOI: 10.1016/j.stem.2020.10.004

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    ncbi.nlm.nih.gov/pmc/articles/PMC7577700/
  12. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    A molecular map of lung neuroendocrine neoplasms
    1
    1. scibot 03 Nov 2020
      RRID:SCR_015687

      DOI: 10.1093/gigascience/giaa112

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    pubmed.ncbi.nlm.nih.gov/33124659/
  13. Oct 2020
  14. www.sciencedirect.com www.sciencedirect.com
    In Vitro Recapitulation of Murine Thymopoiesis from Single Hematopoietic Stem Cells
    1
    1. scibot 31 Oct 2020
      RRID:SCR_015687

      DOI: 10.1016/j.celrep.2020.108320

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    sciencedirect.com/science/article/pii/S2211124720313097
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Caenorhabditis elegans methionine/S-adenosylmethionine cycle activity is sensed and adjusted by a nuclear hormone receptor
    1
    1. scibot 24 Oct 2020
      RRID:SCR_01568

      DOI: 10.7554/eLife.60259

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    ncbi.nlm.nih.gov/pmc/articles/PMC7561351/
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Pluripotent Stem Cell-Derived Neural Cells and Brain Organoids Reveal SARS-CoV-2 Neurotropism Predominates in Choroid Plexus Epithelium
    1
    1. scibot 06 Oct 2020
      RRID:SCR_015687

      DOI: 10.1016/j.stem.2020.09.016

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    ncbi.nlm.nih.gov/pmc/articles/PMC7505550/
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ribosomal profiling during prion disease uncovers progressive translational derangement in glia but not in neurons
    1
    1. scibot 03 Oct 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.62911

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    ncbi.nlm.nih.gov/pmc/articles/PMC7527237/
  18. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Coding transcriptome analyses reveal altered functions underlying immunotolerance of PEG-fused rat sciatic nerve allografts
    1
    1. scibot 03 Oct 2020
      RRID:SCR_015687

      DOI: 10.1186/s12974-020-01953-8

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    pubmed.ncbi.nlm.nih.gov/33008419/
  19. Sep 2020
  20. elifesciences.org elifesciences.org
    EDF1 coordinates cellular responses to ribosome collisions
    1
    1. scibot 26 Sep 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.58828

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    elifesciences.org/articles/58828
  21. elifesciences.org elifesciences.org
    Transposase-assisted tagmentation of RNA/DNA hybrid duplexes
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.54919

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    elifesciences.org/articles/54919
  22. www.sciencedirect.com www.sciencedirect.com
    BCG Vaccination in Humans Elicits Trained Immunity via the Hematopoietic Progenitor Compartment
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.1016/j.chom.2020.05.014

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    sciencedirect.com/science/article/pii/S1931312820302961
  23. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Fetal HLA-G mediated immune tolerance and interferon response in preeclampsia
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.1016/j.ebiom.2020.102872

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    pubmed.ncbi.nlm.nih.gov/32680723/
  24. www.sciencedirect.com www.sciencedirect.com
    Senescence-Induced Vascular Remodeling Creates Therapeutic Vulnerabilities in Pancreas Cancer
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.1016/j.cell.2020.03.008

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    sciencedirect.com/science/article/pii/S0092867420302701
  25. www.sciencedirect.com www.sciencedirect.com
    Skeletal Muscle Transcriptomic Comparison between Long-Term Trained and Untrained Men and Women
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.1016/j.celrep.2020.107808

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    sciencedirect.com/science/article/pii/S2211124720307890
  26. www.sciencedirect.com www.sciencedirect.com
    Regulatory Dynamics of Tet1 and Oct4 Resolve Stages of Global DNA Demethylation and Transcriptomic Changes in Reprogramming
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.1016/j.celrep.2020.01.065

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    sciencedirect.com/science/article/pii/S2211124720300905
  27. www.mdpi.com www.mdpi.com
    Silencing Core Spliceosome Sm Gene Expression Induces a Cytotoxic Splicing Switch in the Proteasome Subunit Beta 3 mRNA in Non-Small Cell Lung Cancer Cells
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.3390/ijms21124192

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    mdpi.com/1422-0067/21/12/4192
  28. www.sciencedirect.com www.sciencedirect.com
    C/EBPα and GATA-2 Mutations Induce Bilineage Acute Erythroid Leukemia through Transformation of a Neomorphic Neutrophil-Erythroid Progenitor
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.1016/j.ccell.2020.03.022

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    sciencedirect.com/science/article/pii/S1535610820301628
  29. www.sciencedirect.com www.sciencedirect.com
    PRL3-DDX21 Transcriptional Control of Endolysosomal Genes Restricts Melanocyte Stem Cell Differentiation
    1
    1. scibot 23 Sep 2020
      RRID:SCR_015687

      DOI: 10.1016/j.devcel.2020.06.013

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    sciencedirect.com/science/article/pii/S1534580720304639
  30. www.sciencedirect.com www.sciencedirect.com
    Interleukin-33 Signaling Controls the Development of Iron-Recycling Macrophages
    1
    1. scibot 23 Sep 2020
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      DOI: 10.1016/j.immuni.2020.03.006

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    sciencedirect.com/science/article/pii/S1074761320301199
  31. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Endogenous itaconate is not required for particulate matter-induced NRF2 expression or inflammatory response
    1
    1. scibot 23 Sep 2020
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      DOI: 10.7554/eLife.54877

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    ncbi.nlm.nih.gov/pmc/articles/PMC7185992/
  32. www.sciencedirect.com www.sciencedirect.com
    Maturational Changes in Mouse Cutaneous Touch and Piezo2-Mediated Mechanotransduction
    1
    1. scibot 23 Sep 2020
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      DOI: 10.1016/j.celrep.2020.107912

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    sciencedirect.com/science/article/pii/S2211124720308937
  33. elifesciences.org elifesciences.org
    Hair follicle dermal condensation forms via Fgf20 primed cell cycle exit, cell motility, and aggregation
    1
    1. scibot 17 Sep 2020
      RRID:SCR_015687

      DOI: 10.7554/eLife.36468

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    elifesciences.org/articles/36468
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single cell analysis reveals human cytomegalovirus drives latently infected cells towards an anergic-like monocyte state
    1
    1. scibot 17 Sep 2020
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      DOI: 10.7554/eLife.52168

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    ncbi.nlm.nih.gov/pmc/articles/PMC7039680/
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    Genetic Variation in Type 1 Diabetes Reconfigures the 3D Chromatin Organization of T Cells and Alters Gene Expression
    1
    1. scibot 17 Sep 2020
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      DOI: 10.1016/j.immuni.2020.01.003

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    sciencedirect.com/science/article/pii/S1074761320300303
  36. elifesciences.org elifesciences.org
    Amplification of a broad transcriptional program by a common factor triggers the meiotic cell cycle in mice
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    1. scibot 17 Sep 2020
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      DOI: 10.7554/eLife.43738

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    elifesciences.org/articles/43738
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Srsf10 and the minor spliceosome control tissue-specific and dynamic SR protein expression
    1
    1. scibot 16 Sep 2020
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      DOI: 10.7554/eLife.56075

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    ncbi.nlm.nih.gov/pmc/articles/PMC7244321/
  38. elifesciences.org elifesciences.org
    The histone modification reader ZCWPW1 links histone methylation to PRDM9-induced double-strand break repair
    1
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      DOI: 10.7554/eLife.53459

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    Heterochromatin-Driven Nuclear Softening Protects the Genome against Mechanical Stress-Induced Damage
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      DOI: 10.1016/j.cell.2020.03.052

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    sciencedirect.com/science/article/pii/S0092867420303457
  40. elifesciences.org elifesciences.org
    Renal medullary carcinomas depend upon SMARCB1 loss and are sensitive to proteasome inhibition
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      DOI: 10.7554/eLife.44161

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    elifesciences.org/articles/44161
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    Gut-Liver Physiomimetics Reveal Paradoxical Modulation of IBD-Related Inflammation by Short-Chain Fatty Acids
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      DOI: 10.1016/j.cels.2020.02.008

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    sciencedirect.com/science/article/pii/S2405471220300788
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    Sialyl-LewisX Glycoantigen Is Enriched on Cells with Persistent HIV Transcription during Therapy
    1
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      DOI: 10.1016/j.celrep.2020.107991

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    sciencedirect.com/science/article/pii/S2211124720309761
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    Pathogenic Tau Causes a Toxic Depletion of Nuclear Calcium
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      DOI: 10.1016/j.celrep.2020.107900

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    sciencedirect.com/science/article/pii/S2211124720308810
  44. elifesciences.org elifesciences.org
    The ESRP1-GPR137 axis contributes to intestinal pathogenesis
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      DOI: 10.7554/eLife.28366

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    elifesciences.org/articles/28366
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    Genomic Rewiring of SOX2 Chromatin Interaction Network during Differentiation of ESCs to Postmitotic Neurons
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      DOI: 10.1016/j.cels.2020.05.003

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    Combinatorial action of NF–Y and TALE at embryonic enhancers defines distinct gene expression programs during zygotic genome activation in zebrafish
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    Postmortem Cortex Samples Identify Distinct Molecular Subtypes of ALS: Retrotransposon Activation, Oxidative Stress, and Activated Glia
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    Drug Screening in Human PSC-Cardiac Organoids Identifies Pro-proliferative Compounds Acting via the Mevalonate Pathway
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    Human Huntington’s Disease iPSC-Derived Cortical Neurons Display Altered Transcriptomics, Morphology, and Maturation
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    The Mouse Microbiome Is Required for Sex-Specific Diurnal Rhythms of Gene Expression and Metabolism
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    A Feedforward Mechanism Mediated by Mechanosensitive Ion Channel PIEZO1 and Tissue Mechanics Promotes Glioma Aggression
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    Mutational Landscape of Secondary Glioblastoma Guides MET-Targeted Trial in Brain Tumor
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    Protein Kinase C Epsilon Deletion in Adipose Tissue, but Not in Liver, Improves Glucose Tolerance
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    Muscle Satellite Cell Cross-Talk with a Vascular Niche Maintains Quiescence via VEGF and Notch Signaling
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    Genetic Modulation of RNA Splicing with a CRISPR-Guided Cytidine Deaminase
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    XBP1-KLF9 Axis Acts as a Molecular Rheostat to Control the Transition from Adaptive to Cytotoxic Unfolded Protein Response
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    HOXA9 Reprograms the Enhancer Landscape to Promote Leukemogenesis
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    ZFX Mediates Non-canonical Oncogenic Functions of the Androgen Receptor Splice Variant 7 in Castrate-Resistant Prostate Cancer
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    Dynamic Human Environmental Exposome Revealed by Longitudinal Personal Monitoring
    1
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    CD56 Expression Marks Human Group 2 Innate Lymphoid Cell Divergence from a Shared NK Cell and Group 3 Innate Lymphoid Cell Developmental Pathway
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    Phosphorylation of the Ribosomal Protein RPL12/uL11 Affects Translation during Mitosis
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    Transcription Factors Drive Tet2-Mediated Enhancer Demethylation to Reprogram Cell Fate
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    Single Cell and Open Chromatin Analysis Reveals Molecular Origin of Epidermal Cells of the Skin
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    Metabolic and Transcriptional Modules Independently Diversify Plasma Cell Lifespan and Function
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  138. www.nature.com www.nature.com
    RANKL/RANK control Brca1 mutation-driven mammary tumors
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    Antibodies Set Boundaries Limiting Microbial Metabolite Penetration and the Resultant Mammalian Host Response
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  140. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Transcriptional and epigenomic landscapes of CNS and non-CNS vascular endothelial cells
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  141. www.sciencedirect.com www.sciencedirect.com
    Neurons under T Cell Attack Coordinate Phagocyte-Mediated Synaptic Stripping
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    Light Affects Mood and Learning through Distinct Retina-Brain Pathways
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    A Map of Toll-like Receptor Expression in the Intestinal Epithelium Reveals Distinct Spatial, Cell Type-Specific, and Temporal Patterns
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    TBK1 Suppresses RIPK1-Driven Apoptosis and Inflammation during Development and in Aging
    1
    1. scibot 05 Nov 2018
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    Dppa2/4 Facilitate Epigenetic Remodeling during Reprogramming to Pluripotency
    1
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    The Evf2 Ultraconserved Enhancer lncRNA Functionally and Spatially Organizes Megabase Distant Genes in the Developing Forebrain
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    Transcription Elongation Can Affect Genome 3D Structure
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  148. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC6107334/
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    Systematic Characterization of Stress-Induced RNA Granulation
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    Dissecting the Functional Consequences of De Novo DNA Methylation Dynamics in Human Motor Neuron Differentiation and Physiology
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    A Family of Vertebrate-Specific Polycombs Encoded by the LCOR/LCORL Genes Balance PRC2 Subtype Activities
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    1. scibot 05 Nov 2018
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    Extracellular Matrix Components HAPLN1, Lumican, and Collagen I Cause Hyaluronic Acid-Dependent Folding of the Developing Human Neocortex
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    Endothelial Regeneration of Large Vessels Is a Biphasic Process Driven by Local Cells with Distinct Proliferative Capacities
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    The Mitochondrial-Encoded Peptide MOTS-c Translocates to the Nucleus to Regulate Nuclear Gene Expression in Response to Metabolic Stress
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    1. scibot 05 Nov 2018
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    Loss of PRMT5 Promotes PDGFRα Degradation during Oligodendrocyte Differentiation and Myelination
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    The Role of m6A/m-RNA Methylation in Stress Response Regulation
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    Biology and Clinical Implications of the 19q13 Aggressive Prostate Cancer Susceptibility Locus
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    Translational Control through Differential Ribosome Pausing during Amino Acid Limitation in Mammalian Cells
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    3D Culture Method for Alzheimer's Disease Modeling Reveals Interleukin-4 Rescues Aβ42-Induced Loss of Human Neural Stem Cell Plasticity
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  163. elifesciences.org elifesciences.org
    TALE factors use two distinct functional modes to control an essential zebrafish gene expression program
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    Defects in the Alternative Splicing-Dependent Regulation of REST Cause Deafness
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    A LINE1-Nucleolin Partnership Regulates Early Development and ESC Identity
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    A Central Extended Amygdala Circuit That Modulates Anxiety
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    EMT Subtype Influences Epithelial Plasticity and Mode of Cell Migration
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    A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain
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    cell.com/cell/abstract/S0092-8674(18)30720-7
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    Multiscale 3D Genome Rewiring during Mouse Neural Development
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    Transcriptome Engineering with RNA-Targeting Type VI-D CRISPR Effectors
    1
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    An Integrated Genome-wide CRISPRa Approach to Functionalize lncRNAs in Drug Resistance
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    Morphogenesis and Compartmentalization of the Intestinal Crypt
    1
    1. scibot 05 Nov 2018
      DESeq2

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    sciencedirect.com/science/article/pii/S1534580718302442
  173. www.sciencedirect.com www.sciencedirect.com
    A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain
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      RRID: SCR_015687

      Curator: @evieth

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    sciencedirect.com/science/article/pii/S0092867418307207
  174. www.sciencedirect.com www.sciencedirect.com
    Natural Infection of C. elegans by an Oomycete Reveals a New Pathogen-Specific Immune Response
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    1. scibot 05 Nov 2018
      RRID: SCR_015687

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S0960982218300319
  175. www.sciencedirect.com www.sciencedirect.com
    PNPT1 Release from Mitochondria during Apoptosis Triggers Decay of Poly(A) RNAs
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      RRID:SCR_015687

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  176. www.sciencedirect.com www.sciencedirect.com
    Lineage-Determining Transcription Factor TCF-1 Initiates the Epigenetic Identity of T Cells
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      RRID:SCR_015687

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    sciencedirect.com/science/article/pii/S1074761318300335
  177. www.sciencedirect.com www.sciencedirect.com
    Dissecting the Causal Mechanism of X-Linked Dystonia-Parkinsonism by Integrating Genome and Transcriptome Assembly
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      RRID:SCR_015687

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    sciencedirect.com/science/article/pii/S0092867418301557
  178. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and plasticity
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    1. scibot 05 Nov 2018
      RRID:SCR_015687

      Curator: @evieth

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    ncbi.nlm.nih.gov/pmc/articles/PMC5906096/
  179. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      RRID:SCR_015687

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    ncbi.nlm.nih.gov/pmc/articles/PMC5898914/
  180. www.sciencedirect.com www.sciencedirect.com
    Insm1 Induces Neural Progenitor Delamination in Developing Neocortex via Downregulation of the Adherens Junction Belt-Specific Protein Plekha7
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    1. scibot 05 Nov 2018
      RRID:SCR_015687

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    sciencedirect.com/science/article/pii/S0896627318300771
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    The Dynamic Landscape of Open Chromatin during Human Cortical Neurogenesis
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    sciencedirect.com/science/article/pii/S0092867417314940
  182. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Microbiome Influences Prenatal and Adult Microglia in a Sex-Specific Manner
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    1. scibot 05 Nov 2018
      RRID:SCR_015687

      Curator: @evieth

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    ncbi.nlm.nih.gov/pmc/articles/PMC5786503/
  183. europepmc.org europepmc.org
    Untitled document
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    europepmc.org/articles/PMC5665647/
  184. Nov 2017
  185. www.sciencedirect.com www.sciencedirect.com
    Chemical Proteomics Identifies Druggable Vulnerabilities in a Genetically Defined Cancer
    1
    1. scibot 08 Nov 2017
      DESeq2

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S0092867417310474
  186. www.sciencedirect.com www.sciencedirect.com
    Hippo Reprograms the Transcriptional Response to Ras Signaling
    1
    1. scibot 08 Nov 2017
      DESeq2

      Curator: @Jmenke

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      (DESeq2, RRID:SCR_015687)

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    sciencedirect.com/science/article/pii/S1534580717306731