128 Matching Annotations
  1. Mar 2024
  2. www.sciencedirect.com www.sciencedirect.com
    Acetyl-CoA carboxylase obstructs CD8+ T cell lipid utilization in the tumor microenvironment
    2
    1. scibot 15 Mar 2024
      RRID:SCR_015753

      DOI: 10.1016/j.cmet.2024.02.009

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    2. scibot 15 Mar 2024
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      DOI: 10.1016/j.cmet.2024.02.009

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    sciencedirect.com/science/article/pii/S155041312400055X
  3. www.biorxiv.org www.biorxiv.org
    Metabolic and age-associated epigenetic barriers during direct reprogramming of mouse fibroblasts into induced cardiomyocytes
    1
    1. scibot 09 Mar 2024
      RRID:SCR_015753

      DOI: 10.1101/2024.02.28.582570

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    biorxiv.org/content/10.1101/2024.02.28.582570v1
  4. Feb 2024
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Parkinson’s VPS35[D620N] mutation induces LRRK2-mediated lysosomal association of RILPL1 and TMEM55B
    1
    1. scibot 10 Feb 2024
      RRID:SCR_015753

      DOI: 10.1126/sciadv.adj1205

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    ncbi.nlm.nih.gov/pmc/articles/PMC10848721/
  6. www.nature.com www.nature.com
    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
    1
    1. scibot 08 Feb 2024
      RRID:SCR_015753

      DOI: 10.1038/s41467-024-45067-8

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    nature.com/articles/s41467-024-45067-8
  7. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Targeting N-linked Glycosylation for the Therapy of Aggressive Lymphomas
    1
    1. scibot 06 Feb 2024
      RRID:SCR_015753

      DOI: 10.1158/2159-8290.CD-22-1401

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    ncbi.nlm.nih.gov/pmc/articles/PMC10524254/
  8. Jan 2024
  9. www.science.org www.science.org
    Temporal landscape of mitochondrial proteostasis governed by the UPRmt
    1
    1. scibot 12 Jan 2024
      RRID: SCR_015753

      DOI: 10.1126/sciadv.adh8228

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    science.org/doi/10.1126/sciadv.adh8228
  10. www.science.org www.science.org
    Parkinson’s VPS35[D620N] mutation induces LRRK2-mediated lysosomal association of RILPL1 and TMEM55B
    1
    1. scibot 12 Jan 2024
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      DOI: 10.1126/sciadv.adj1205

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    science.org/doi/10.1126/sciadv.adj1205
  11. www.sciencedirect.com www.sciencedirect.com
    Response to Bruton’s tyrosine kinase inhibitors in aggressive lymphomas linked to chronic selective autophagy
    1
    1. scibot 12 Jan 2024
      RRID:SCR_015753

      DOI: 10.1016/j.ccell.2023.12.019

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    sciencedirect.com/science/article/pii/S1535610823004476
  12. www.sciencedirect.com www.sciencedirect.com
    TDP-43-stratified single-cell proteomics of postmortem human spinal motor neurons reveals protein dynamics in amyotrophic lateral sclerosis
    1
    1. scibot 10 Jan 2024
      RRID:SCR_015753

      DOI: 10.1016/j.celrep.2023.113636

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    sciencedirect.com/science/article/pii/S2211124723016479
  13. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Metal dyshomeostasis in the substantia nigra of patients with Parkinson's disease or multiple sclerosis
    1
    1. scibot 09 Jan 2024
      RRID:SCR_015753

      DOI: 10.1111/jnc.16040

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    onlinelibrary.wiley.com/doi/10.1111/jnc.16040
  14. Dec 2023
  15. www.sciencedirect.com www.sciencedirect.com
    RAF-like protein kinases mediate a deeply conserved, rapid auxin response
    1
    1. scibot 22 Dec 2023
      RRID:SCR_015753

      DOI: 10.1016/j.cell.2023.11.021

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    sciencedirect.com/science/article/pii/S0092867423012758
  16. www.sciencedirect.com www.sciencedirect.com
    A proteomic insight reveals the role of food-associated Lactiplantibacillus plantarum C9O4 in reverting intestinal inflammation
    1
    1. scibot 02 Dec 2023
      RRID:SCR_015753

      DOI: 10.1016/j.isci.2023.108481

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    sciencedirect.com/science/article/pii/S2589004223025580
  17. Nov 2023
  18. www.sciencedirect.com www.sciencedirect.com
    Locus-specific proteome decoding reveals Fpt1 as a chromatin-associated negative regulator of RNA polymerase III assembly
    1
    1. scibot 28 Nov 2023
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      DOI: 10.1016/j.molcel.2023.10.037

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    sciencedirect.com/science/article/pii/S1097276523009085
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Analysis of CDPK1 targets identifies a trafficking adaptor complex that regulates microneme exocytosis in Toxoplasma
    2
    1. scibot 11 Nov 2023
      RRID:SCR_015753

      DOI: 10.7554/eLife.85654

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    2. scibot 11 Nov 2023
      RRID:SCR_015753

      DOI: 10.7554/eLife.85654

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    ncbi.nlm.nih.gov/pmc/articles/PMC10629828/
  20. Oct 2023
  21. www.cell.com www.cell.com
    Heterogeneity of perivascular astrocyte endfeet depending on vascular regions in the mouse brain
    1
    1. scibot 07 Oct 2023
      RRID:SCR_015753

      DOI: 10.1016/j.isci.2023.108010

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    cell.com/iscience/abstract/S2589-0042(23)02087-4
  22. Sep 2023
  23. www.science.org www.science.org
    Temporal landscape of mitochondrial proteostasis governed by the UPRmt
    1
    1. scibot 27 Sep 2023
      RRID:SCR_015753

      DOI: 10.1126/sciadv.adh8228

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    science.org/doi/10.1126/sciadv.adh8228
  24. www.sciencedirect.com www.sciencedirect.com
    Direct recruitment of Mis18 to interphase spindle pole bodies promotes CENP-A chromatin assembly
    1
    1. scibot 16 Sep 2023
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      DOI: 10.1016/j.cub.2023.08.063

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    sciencedirect.com/science/article/pii/S0960982223011430
  25. Aug 2023
  26. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Glomerular proteomic profiling reveals early differences between preexisting and de novo type 2 diabetes in human renal allografts
    1
    1. scibot 31 Aug 2023
      RRID:SCR_015753

      DOI: 10.1186/s12882-023-03294-z

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    ncbi.nlm.nih.gov/pmc/articles/PMC10464146/
  27. Jul 2023
  28. www.sciencedirect.com www.sciencedirect.com
    Mechanism of orphan subunit recognition during assembly quality control
    1
    1. scibot 22 Jul 2023
      RRID:SCR_015753

      DOI: 10.1016/j.cell.2023.06.016

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    sciencedirect.com/science/article/pii/S0092867423006943
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Whole proteome copy number dataset in primary mouse cortical neurons
    1
    1. scibot 18 Jul 2023
      RRID:SCR_015753

      DOI: 10.1016/j.dib.2023.109336

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    ncbi.nlm.nih.gov/pmc/articles/PMC10344827/
  30. www.biorxiv.org www.biorxiv.org
    Parkinson’s VP535[D620N] mutation induces LRRK2 mediated lysosomal association of RILPL1 and TMEM55B
    1
    1. scibot 01 Jul 2023
      RRID:SCR_015753

      DOI: 10.1101/2023.06.07.544051

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    biorxiv.org/content/10.1101/2023.06.07.544051v1
  31. Jun 2023
  32. www.embopress.org www.embopress.org
    PARK15/FBXO7 is dispensable for PINK1/Parkin mitophagy in iNeurons and HeLa cell systems
    1
    1. scibot 23 Jun 2023
      RRID:SCR_015753

      DOI: 10.15252/embr.202256399

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    embopress.org/doi/full/10.15252/embr.202256399
  33. aacrjournals.org aacrjournals.org
    ROS Induction Targets Persister Cancer Cells with Low Metabolic Activity in NRAS-Mutated Melanoma
    1
    1. scibot 03 Jun 2023
      RRID:SCR_015753

      DOI: 10.1158/0008-5472.CAN-22-1826

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    aacrjournals.org/cancerres/article/83/7/1128/718992/ROS-Induction-Targets-Persister-Cancer-Cells-with
  34. www.science.org www.science.org
    An abundance of free regulatory (19S) proteasome particles regulates neuronal synapses
    1
    1. scibot 01 Jun 2023
      RRID:SCR_015753

      DOI: 10.1126/science.adf2018

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    science.org/doi/10.1126/science.adf2018
  35. Apr 2023
  36. www.sciencedirect.com www.sciencedirect.com
    Vascular cells improve functionality of human cardiac organoids
    1
    1. scibot 27 Apr 2023
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      DOI: 10.1016/j.celrep.2023.112322

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    sciencedirect.com/science/article/pii/S2211124723003339
  37. europepmc.org europepmc.org
    A Novel Method for Visualizing In-Vivo Rates of Protein Degradation Provides Insight into how TRIM28 Regulates Muscle Size
    1
    1. scibot 20 Apr 2023
      RRID:SCR_015753

      DOI: 10.1016/j.isci.2023.106526

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    europepmc.org/article/pmc/pmc10105291
  38. www.sciencedirect.com www.sciencedirect.com
    TIAR and FMRP shape pro-survival nascent proteome of leukemia cells in the bone marrow microenvironment
    1
    1. scibot 13 Apr 2023
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      DOI: 10.1016/j.isci.2023.106543

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    sciencedirect.com/science/article/pii/S258900422300620X
  39. Mar 2023
  40. link.springer.com link.springer.com
    Proteome of airway surface liquid and mucus in newborn wildtype and cystic fibrosis piglets
    1
    1. scibot 17 Mar 2023
      RRID:SCR_015753

      DOI: 10.1186/s12931-023-02381-x

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    link.springer.com/article/10.1186/s12931-023-02381-x
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteomics profiling of vitreous humor reveals complement and coagulation components, adhesion factors, and neurodegeneration markers as discriminatory biomarkers of vitreoretinal eye diseases
    1
    1. scibot 04 Mar 2023
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      DOI: 10.3389/fimmu.2023.1107295

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    ncbi.nlm.nih.gov/pmc/articles/PMC9978817/
  42. www.sciencedirect.com www.sciencedirect.com
    Ricca’s factors as mobile proteinaceous effectors of electrical signaling
    1
    1. scibot 04 Mar 2023
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      DOI: 10.1016/j.cell.2023.02.006

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    sciencedirect.com/science/article/pii/S0092867423001083
  43. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Ceruloplasmin deficient mice show changes in PTM profiles of proteins involved in messenger RNA processing and neuronal projections and synaptic processes
    1
    1. scibot 03 Mar 2023
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      DOI: 10.1111/jnc.15754

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    onlinelibrary.wiley.com/doi/10.1111/jnc.15754
  44. Feb 2023
  45. www.nature.com www.nature.com
    The AAA+ chaperone VCP disaggregates Tau fibrils and generates aggregate seeds in a cellular system
    1
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      DOI: 10.1038/s41467-023-36058-2

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    nature.com/articles/s41467-023-36058-2
  46. Jan 2023
  47. royalsocietypublishing.org royalsocietypublishing.org
    A mitochondrion-free eukaryote contains proteins capable of import into an exogenous mitochondrion-related organelle
    1
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      DOI: 10.1098/rsob.220238

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    royalsocietypublishing.org/doi/10.1098/rsob.220238
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human Papillomavirus 42 Drives Digital Papillary Adenocarcinoma and Elicits a Germ Cell–like Program Conserved in HPV-Positive Cancers
    1
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      DOI: 10.1158/2159-8290.CD-22-0489

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    ncbi.nlm.nih.gov/pmc/articles/PMC9827110/
  49. Dec 2022
  50. www.sciencedirect.com www.sciencedirect.com
    Hippo-released WWC1 facilitates AMPA receptor regulatory complexes for hippocampal learning
    1
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      DOI: 10.1016/j.celrep.2022.111766

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    sciencedirect.com/science/article/pii/S2211124722016497
  51. Nov 2022
  52. www.nature.com www.nature.com
    Protein aggregation and calcium dysregulation are hallmarks of familial Parkinson’s disease in midbrain dopaminergic neurons
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      DOI: 10.1038/s41531-022-00423-7

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    nature.com/articles/s41531-022-00423-7
  53. www.sciencedirect.com www.sciencedirect.com
    Global profiling of the proteomic changes associated with the post-testicular maturation of mouse spermatozoa
    1
    1. scibot 16 Nov 2022
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      DOI: 10.1016/j.celrep.2022.111655

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    sciencedirect.com/science/article/pii/S2211124722015261
  54. www.sciencedirect.com www.sciencedirect.com
    Long non-coding RNA PCAT19 safeguards DNA in quiescent endothelial cells by preventing uncontrolled phosphorylation of RPA2
    1
    1. scibot 16 Nov 2022
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      DOI: 10.1016/j.celrep.2022.111670

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    sciencedirect.com/science/article/pii/S2211124722015443
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Generation of cell-type-specific proteomes of neurodevelopment from human cerebral organoids
    1
    1. scibot 03 Nov 2022
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      DOI: 10.1016/j.xpro.2022.101774

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    ncbi.nlm.nih.gov/pmc/articles/PMC9597183/
  56. Sep 2022
  57. www.sciencedirect.com www.sciencedirect.com
    The molecular network of the proteasome machinery inhibition response is orchestrated by HSP70, revealing vulnerabilities in cancer cells
    1
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      DOI: 10.1016/j.celrep.2022.111428

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    NCOA4-mediated ferritinophagy is a pancreatic cancer dependency via maintenance of iron bioavailability for iron-sulfur cluster proteins
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    Comparative maternal protein profiling of mouse biparental and uniparental embryos
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    Convergent cerebrospinal fluid proteomes and metabolic ontologies in humans and animal models of Rett syndrome
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    Regionally defined proteomic profiles of human cerebral tissue and organoids reveal conserved molecular modules of neurodevelopment
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    Proteomic-Based Machine Learning Analysis Reveals PYGB as a Novel Immunohistochemical Biomarker to Distinguish Inverted Urothelial Papilloma From Low-Grade Papillary Urothelial Carcinoma With Inverted Growth
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    LGL1 binds to Integrin β1 and inhibits downstream signaling to promote epithelial branching in the mammary gland
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    Dynamic bi-directional phosphorylation events associated with the reciprocal regulation of synapses during homeostatic up- and down-scaling
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    The Neuroprotective Role of the GM1 Oligosaccharide, II<Superscript>3</Superscript>Neu5Ac-Gg<Subscript>4</Subscript>, in Neuroblastoma Cells
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    Diagnostic Biomarkers from Proteomic Characterization of Cerebrospinal Fluid in Patients with Brain Malignancies
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    ATG4 family proteins drive phagophore growth independently of the LC3/GABARAP lipidation system
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    A Cell-Autonomous Signature of Dysregulated Protein Phosphorylation Underlies Muscle Insulin Resistance in Type 2 Diabetes
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    Triplexed Affinity Reagents to Sample the Mammalian Inositol Pyrophosphate Interactome
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    Proteomic profile of urinary extracellular vesicles identifies AGP1 as a potential biomarker of primary aldosteronism
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  114. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    BET Inhibition Blocks Inflammation-Induced Cardiac Dysfunction and SARS-CoV-2 Infection
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  115. Mar 2021
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    Proteogenomics of glioblastoma associates molecular patterns with survival
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    Mapping of the contraction-induced phosphoproteome identifies TRIM28 as a significant regulator of skeletal muscle size and function
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  118. Feb 2021
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    Identification of host proteins differentially associated with HIV-1 RNA splice variants
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  120. www.cell.com www.cell.com
    Fatal Perinatal Mitochondrial Cardiac Failure Caused by Recurrent De Novo Duplications in the ATAD3 Locus
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    The glucocorticoid receptor recruits the COMPASS complex to regulate inflammatory transcription at macrophage enhancers
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  122. Jan 2021
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    Homogentisic acid induces cytoskeleton and extracellular matrix alteration in alkaptonuric cartilage
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  125. Dec 2020
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    Circadian VIPergic Neurons of the Suprachiasmatic Nuclei Sculpt the Sleep-Wake Cycle
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    The malaria parasite sheddase SUB2 governs host red blood cell membrane sealing at invasion
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    RNF41 regulates the damage recognition receptor Clec9A and antigen cross-presentation in mouse dendritic cells
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    Comprehensive Multi-omics Analysis Reveals Mitochondrial Stress as a Central Biological Hub for Spaceflight Impact
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  130. Nov 2020
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    CRISPR-Mediated Induction of Neuron-Enriched Mitochondrial Proteins Boosts Direct Glia-to-Neuron Conversion
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  132. Oct 2020
  133. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An optimized quantitative proteomics method establishes the cell type‐resolved mouse brain secretome
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  134. www.cell.com www.cell.com
    Fatal Perinatal Mitochondrial Cardiac Failure Caused by Recurrent De Novo Duplications in the ATAD3 Locus
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    Ordered dephosphorylation initiated by the selective proteolysis of cyclin B drives mitotic exit
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  136. Sep 2020
  137. aem.asm.org aem.asm.org
    Identification of genes required for glucan exopolysaccharide production in Lactobacillus johnsonii suggests a novel mechanism of biosynthesis
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  138. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Profiling of myristoylation in Toxoplasma gondii reveals an N-myristoylated protein important for host cell penetration
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  139. elifesciences.org elifesciences.org
    EDF1 coordinates cellular responses to ribosome collisions
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  140. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Differential accumulation of storage bodies with aging defines discrete subsets of microglia in the healthy brain
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  141. onlinelibrary.wiley.com onlinelibrary.wiley.com
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    Dissecting the Roles of Mitochondrial Complex I Intermediate Assembly Complex Factors in the Biogenesis of Complex I
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    Metabolic reprogramming of fibro/adipogenic progenitors facilitates muscle regeneration
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  144. Jan 2020
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    Mesothelial Cell HIF1α Expression Is Metabolically Downregulated by Metformin to Prevent Oncogenic Tumor-Stromal Crosstalk
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  146. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Increased expression of heme-binding protein 1 early in Alzheimer's disease is linked to neurotoxicity
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    Functional Analysis of the Replication Fork Proteome Identifies BET Proteins as PCNA Regulators
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    Protein quality control in the nucleolus safeguards recovery of epigenetic regulators after heat shock
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    In vivo identification of GTPase interactors by mitochondrial relocalization and proximity biotinylation
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    Functional Translatome Proteomics Reveal Converging and Dose-Dependent Regulation by mTORC1 and eIF2α
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    Noncanonical Modulation of the eIF2 Pathway Controls an Increase in Local Translation during Neural Wiring
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  152. www.sciencedirect.com www.sciencedirect.com
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      DOI: 10.1016/j.immuni.2018.09.004

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    Phosphoproteomics Reveals the GSK3-PDX1 Axis as a Key Pathogenic Signaling Node in Diabetic Islets
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  154. Nov 2018
  155. www.sciencedirect.com www.sciencedirect.com
    Novel RNA-Affinity Proteogenomics Dissects Tumor Heterogeneity for Revealing Personalized Markers in Precision Prognosis of Cancer
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    Organellar Proteomics and Phospho-Proteomics Reveal Subcellular Reorganization in Diet-Induced Hepatic Steatosis
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    Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation
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  158. www.sciencedirect.com www.sciencedirect.com
    Transcriptional and Translational Differences of Microglia from Male and Female Brains
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  159. www.sciencedirect.com www.sciencedirect.com
    Systems-wide Analysis of Serine ADP-Ribosylation Reveals Widespread Occurrence and Site-Specific Overlap with Phosphorylation
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  160. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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  161. www.sciencedirect.com www.sciencedirect.com
    Rapid Cue-Specific Remodeling of the Nascent Axonal Proteome
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    sciencedirect.com/science/article/pii/S0896627318304720
  162. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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      RRID:SCR_015753

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    ncbi.nlm.nih.gov/pmc/articles/PMC6008053/
  163. www.sciencedirect.com www.sciencedirect.com
    The H3K36me2 Methyltransferase Nsd1 Demarcates PRC2-Mediated H3K27me2 and H3K27me3 Domains in Embryonic Stem Cells
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    1. scibot 05 Nov 2018
      Perseus

      Curator: @Jmenke

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    sciencedirect.com/science/article/pii/S1097276518301722
  164. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
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    ncbi.nlm.nih.gov/pmc/articles/PMC5899830/
  165. www.sciencedirect.com www.sciencedirect.com
    Chromatin Accessibility-Based Characterization of the Gene Regulatory Network Underlying Plasmodium falciparum Blood-Stage Development
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    1. scibot 05 Nov 2018
      RRID:SCR_015753

      Curator: @evieth

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      (Perseus, RRID:SCR_015753)

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    sciencedirect.com/science/article/pii/S1931312818301367