149 Matching Annotations
  1. Last 7 days
  2. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Immune involvement in neuropsychiatric disorders: Insights from single-cell transcriptomic studies
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    onlinelibrary.wiley.com/doi/full/10.1111/pcn.70018
  3. www.nature.com www.nature.com
    The new frontier in understanding human and mammalian brain development
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-025-09652-1
  4. www.nature.com www.nature.com
    The ANTsX ecosystem for mapping the mouse brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41467-025-66741-5
  5. www.nature.com www.nature.com
    Mapping human brain cell type origin and diseases through single-cell transcriptomics
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41398-025-03562-6
  6. Feb 2026
  7. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    CellScope: high-performance cell atlas workflow with tree-structured representation
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    pmc.ncbi.nlm.nih.gov/articles/PMC12855844/
  8. www.sciencedirect.com www.sciencedirect.com
    The Smarcal1-Usp37 locus modulates glycogen aggregation in astrocytes of the aged hippocampus
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2405471225003217
  9. Oct 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The xIV-LDDMM toolkit of image-varifold based technologies for mapping 3D images and spatial-omics across scales
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    pmc.ncbi.nlm.nih.gov/articles/PMC12484866/
  11. Aug 2025
  12. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A diverse landscape of FGFR alterations and co-mutations suggests potential therapeutic strategies in pediatric low-grade gliomas
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    pmc.ncbi.nlm.nih.gov/articles/PMC12314019/
  13. Jul 2025
  14. elifesciences.org elifesciences.org
    The BRAIN Initiative data-sharing ecosystem: Characteristics, challenges, benefits, and opportunities
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/94000
  15. www.frontiersin.org www.frontiersin.org
    A brief history of somatostatin interneuron taxonomy or: how many somatostatin subtypes are there, really?
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    frontiersin.org/journals/neural-circuits/articles/10.3389/fncir.2024.1436915/full
  16. journals.sagepub.com journals.sagepub.com
    Glial changes and gene expression in Alzheimer's disease from snRNA-Seq and spatial transcriptomics - Songren Wei, Chenyang Li, Wenxuan Li, Fumiao Yuan, Jingjing Kong, Xi Su, Peng Huang, Hongbo Guo, Jiangping Xu, Haitao Sun, 2025
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    journals.sagepub.com/doi/full/10.1177/13872877251330320
  17. ieeexplore.ieee.org ieeexplore.ieee.org
    Cytosplore EvoViewer: Visual Analytics of Conserved Evolutionary Patterns in multi-species single-cell sequencing data
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ieeexplore.ieee.org/abstract/document/11021027/
  18. ieeexplore.ieee.org ieeexplore.ieee.org
    AnVILMEDFORD: Documenting Cloud-Based Analysis Projects Using the MEDFORD Metadata Language
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ieeexplore.ieee.org/abstract/document/10825145/
  19. www.cjcnn.org www.cjcnn.org
    Progress on the application of supercomputer brain simulation technology | SUN | Chinese Journal of Contemporary Neurology and Neurosurgery
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    cjcnn.org/index.php/cjcnn/article/view/2988/2934
  20. www.science.org www.science.org
    SOAR elucidates biological insights and empowers drug discovery through spatial transcriptomics
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/sciadv.adt7450
  21. ieeexplore.ieee.org ieeexplore.ieee.org
    Cytosplore EvoViewer: Visual Analytics of Conserved Evolutionary Patterns in multi-species single-cell sequencing data
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ieeexplore.ieee.org/abstract/document/11021027/
  22. www.biorxiv.org www.biorxiv.org
    CellScope: High-Performance Cell Atlas Workflow with Tree-Structured Representation
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2025.02.15.638400v1
  23. www.tandfonline.com www.tandfonline.com
    Hif-1α ablation reduces the efficiency of NeuroD1 gene-based therapy and aggravates the brain damage following ischemic stroke
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    tandfonline.com/doi/full/10.1080/17425247.2024.2435458
  24. www.annualreviews.org www.annualreviews.org
    Cell Type–Specific Studies of Human Tissue for Investigation of the Molecular Cell Biology of Late-Onset Neurodegenerative Disease
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    annualreviews.org/content/journals/10.1146/annurev-neuro-112723-025516
  25. Jun 2025
  26. europepmc.org europepmc.org
    Open Frontiers in Neural Cell Type Investigations; Lessons From <i>Caenorhabditis elegans</i> and Beyond, Toward a Multimodal Integration.
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    europepmc.org/article/pmc/pmc8934944
  27. Apr 2025
  28. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Integrated analysis of molecular atlases unveils modules driving developmental cell subtype specification in the human cortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    pmc.ncbi.nlm.nih.gov/articles/PMC12081304/
  29. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Developing a multiscale neural connectivity knowledgebase of the autonomic nervous system
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    pmc.ncbi.nlm.nih.gov/articles/PMC11949889/
  30. Feb 2025
  31. www.sciencedirect.com www.sciencedirect.com
    Molecular signature of primate astrocytes reveals pathways and regulatory changes contributing to human brain evolution
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1934590924004582
  32. Jan 2025
  33. www.nature.com www.nature.com
    Depth-corrected multi-factor dissection of chromatin accessibility for scATAC-seq data with PACS
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41467-024-55580-5
  34. Dec 2024
  35. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    xIV-LDDMM Toolkit: A Suite of Image-Varifold Based Technologies for Representing and Mapping 3D Imaging and Spatial-omics Data Simultaneously Across Scales
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    pmc.ncbi.nlm.nih.gov/articles/PMC11580965/
  36. Sep 2024
  37. www.sciencedirect.com www.sciencedirect.com
    A Global Transcriptional Atlas of the Effect of Acute Sleep Deprivation in the Mouse Frontal Cortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S2589004224019771
  38. Aug 2024
  39. www.nature.com www.nature.com
    Cellular anatomy of the mouse primary motor cortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-021-03970-w
  40. www.frontiersin.org www.frontiersin.org
    The Spatial and Cell-Type Distribution of SARS-CoV-2 Receptor ACE2 in the Human and Mouse Brains
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    frontiersin.org/articles/10.3389/fneur.2020.573095/full
  41. elifesciences.org elifesciences.org
    Scaled, high fidelity electrophysiological, morphological, and transcriptomic cell characterization
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/65482
  42. Jul 2024
  43. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Genoarchitectural Definition of the Adult Mouse Mesocortical Ring: A Contribution to Cortical Ring Theory
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    onlinelibrary.wiley.com/doi/10.1002/cne.25647
  44. Jun 2024
  45. www.nature.com www.nature.com
    AtOM, an ontology model to standardize use of brain atlases in tools, workflows, and data infrastructures
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41597-023-02389-4
  46. link.springer.com link.springer.com
    OME-Zarr: a cloud-optimized bioimaging file format with international community support
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1007/s00418-023-02209-1
  47. www.sciencedirect.com www.sciencedirect.com
    Harnessing computational spatial omics to explore the spatial biology intricacies
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1044579X23000974
  48. academic.oup.com academic.oup.com
    Learning single-cell chromatin accessibility profiles using meta-analytic marker genes
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    academic.oup.com/bib/article/24/1/bbac541/6957249
  49. www.nature.com www.nature.com
    Mapping human tissues with highly multiplexed RNA in situ hybridization
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41467-024-46437-y
  50. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Single-cell and spatial alterations of neural cells and circuits in clinical and translational medicine
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    onlinelibrary.wiley.com/doi/full/10.1002/ctm2.1696
  51. www.science.org www.science.org
    Integrated platform for multiscale molecular imaging and phenotyping of the human brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adh9979
  52. May 2024
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improving replicability in single-cell RNA-Seq cell type discovery with Dune
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC11127396/
  54. Apr 2024
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Cross-modality mapping using image varifolds to align tissue-scale atlases to molecular-scale measures with application to 2D brain sections
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC11045777/
  56. Jan 2024
  57. www.biorxiv.org www.biorxiv.org
    The Brain Image Library: A Community-Contributed Microscopy Resource for Neuroscientists
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.12.22.573024v2
  58. www.nature.com www.nature.com
    Molecularly defined and spatially resolved cell atlas of the whole mouse brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-023-06808-9
  59. www.science.org www.science.org
    A cellular resolution atlas of Broca’s area
    3
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/sciadv.adg3844
  60. www.science.org www.science.org
    A quest into the human brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adl0913
  61. www.science.org www.science.org
    A family portrait of human brain cells
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adk4857
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Diversity of primate brain cells unraveled
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10569699/
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Multi-omic profiling of the developing human cerebral cortex at the single-cell level
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10569714/
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Structural and functional specializations of human fast-spiking neurons support fast cortical signaling
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10569701/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Human voltage-gated Na+ and K+ channel properties underlie sustained fast AP signaling
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10569700/
  66. www.science.org www.science.org
    A comparative atlas of single-cell chromatin accessibility in the human brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf7044
  67. www.science.org www.science.org
    Signature morphoelectric properties of diverse GABAergic interneurons in the human neocortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf6484
  68. www.science.org www.science.org
    Molecular programs of regional specification and neural stem cell fate progression in macaque telencephalon
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf3786
  69. www.science.org www.science.org
    Comprehensive cell atlas of the first-trimester developing human brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf1226
  70. www.science.org www.science.org
    Single-cell analysis of prenatal and postnatal human cortical development
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf0834
  71. www.science.org www.science.org
    Morphoelectric and transcriptomic divergence of the layer 1 interneuron repertoire in human versus mouse neocortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf0805
  72. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative transcriptomics reveals human-specific cortical features
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10659116/
  73. www.science.org www.science.org
    Transcriptomic diversity of cell types across the adult human brain
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.add7046
  74. www.science.org www.science.org
    A single-cell genomic atlas for maturation of the human cerebellum during early childhood
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/scitranslmed.ade1283
  75. www.science.org www.science.org
    Transcriptomic cytoarchitecture reveals principles of human neocortex organization
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf6812
  76. www.biorxiv.org www.biorxiv.org
    Transcriptomic cytoarchitecture reveals principles of human neocortex organization
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.11.06.515349v1
  77. Dec 2023
  78. www.nature.com www.nature.com
    Cellular atlases of the entire mouse brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/d41586-023-03781-1
  79. www.nature.com www.nature.com
    Why mega brain project teams need to be talking to each other
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/d41586-023-03954-y
  80. www.nature.com www.nature.com
    A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-023-06812-z
  81. www.nature.com www.nature.com
    BigNeuron: a resource to benchmark and predict performance of algorithms for automated tracing of neurons in light microscopy datasets
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41592-023-01848-5
  82. www.sciencedirect.com www.sciencedirect.com
    Spatial transcriptomics
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/B9780323918107000194
  83. www.biorxiv.org www.biorxiv.org
    AtOM, an ontology model for standardizing use of brain atlases in tools, workflows, and data infrastructures
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.01.22.525049v1
  84. journals.plos.org journals.plos.org
    Spatial registration of serial microscopic brain images to three-dimensional reference atlases with the QuickNII tool
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    journals.plos.org/plosone/article
  85. www.biorxiv.org www.biorxiv.org
    OME-Zarr: a cloud-optimized bioimaging file format with international community support
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.02.17.528834v4
  86. www.biorxiv.org www.biorxiv.org
    Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.03.31.016972v2
  87. www.biorxiv.org www.biorxiv.org
    BigNeuron: A resource to benchmark and predict best-performing algorithms for automated reconstruction of neuronal morphology
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.05.10.491406v1
  88. www.biorxiv.org www.biorxiv.org
    Compressed sensing for imaging transcriptomics
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/743039v2
  89. www.science.org www.science.org
    Transcriptomic cytoarchitecture reveals principles of human neocortex organization
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf6812
  90. www.biorxiv.org www.biorxiv.org
    Improving replicability in single-cell RNA-Seq cell type discovery with Dune
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.03.03.974220v2
  91. www.biorxiv.org www.biorxiv.org
    Epigenomic complexity of the human brain revealed by single-cell DNA methylomes and 3D genome structures
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.11.30.518285v1
  92. www.science.org www.science.org
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/sciadv.adh1914
  93. www.science.org www.science.org
    Single-cell genomics reveals region-specific developmental trajectories underlying neuronal diversity in the human hypothalamus
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/sciadv.adf6251
  94. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Brain proteome profiling implicates the complement and coagulation cascade in multiple system atrophy brain pathology
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9164190/
  95. www.biorxiv.org www.biorxiv.org
    A marmoset brain cell census reveals influence of developmental origin and functional class on neuronal identity
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.10.18.512442v2
  96. www.nature.com www.nature.com
    HypoMap—a unified single-cell gene expression atlas of the murine hypothalamus
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s42255-022-00657-y
  97. journals.plos.org journals.plos.org
    A comparison of anatomic and cellular transcriptome structures across 40 human brain diseases
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    journals.plos.org/plosbiology/article
  98. www.nature.com www.nature.com
    Compressed sensing for highly efficient imaging transcriptomics
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41587-021-00883-x
  99. elifesciences.org elifesciences.org
    Common cell type nomenclature for the mammalian brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    elifesciences.org/articles/59928
  100. link.springer.com link.springer.com
    Turning the Tide of Data Sharing
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1007/s12021-019-09437-8
  101. journals.plos.org journals.plos.org
    A guide to the BRAIN Initiative Cell Census Network data ecosystem
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    journals.plos.org/plosbiology/article
  102. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-resolution transcriptomic and spatial atlas of cell types in the whole mouse brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10081189/
  103. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative transcriptomics reveals human-specific cortical features
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10659116/
  104. Nov 2023
  105. www.science.org www.science.org
    Interindividual variation in human cortical cell type abundance and expression
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf2359
  106. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell genomics reveals region-specific developmental trajectories underlying neuronal diversity in the human hypothalamus
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10631741/
  107. 52.53.155.43 52.53.155.43
    Extending and using anatomical vocabularies in the Stimulating Peripheral Activity to Relieve Conditions (SPARC) program
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/d4240805a0a9a6a581fb5d53d6f07042a213e027/2021.11.15.467961.full-html.html
  108. Oct 2023
  109. www.science.org www.science.org
    A marmoset brain cell census reveals regional specialization of cellular identities
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/sciadv.adk3986
  110. www.science.org www.science.org
    Single Cell DNA Methylation and 3D Genome Architecture in the Human Brain
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.adf5357
  111. www.science.org www.science.org
    Comparative transcriptomics reveals human-specific cortical features
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/doi/10.1126/science.ade9516
  112. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10569716/
  113. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A marmoset brain cell census reveals regional specialization of cellular identities
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10569717/
  114. Sep 2023
  115. www.sciencedirect.com www.sciencedirect.com
    Harnessing computational spatial omics to explore the spatial biology intricacies
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1044579X23000974
  116. www.nature.com www.nature.com
    Anatomical and molecular characterization of parvalbumin-cholecystokinin co-expressing inhibitory interneurons: implications for neuropsychiatric conditions
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41380-023-02153-5
  117. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Droplet-based single-cell joint profiling of histone modifications and transcriptomes
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10584685/
  118. www.biorxiv.org www.biorxiv.org
    A Meta-Atlas of the Developing Human Cortex Identifies Modules Driving Cell Subtype Specification
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.09.12.557406v1
  119. www.biorxiv.org www.biorxiv.org
    Spatiotemporal molecular dynamics of the developing human thalamus
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.08.21.554174v1
  120. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative single-cell transcriptomic analysis of primate brains highlights human-specific regulatory evolution
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10627823/
  121. www.biorxiv.org www.biorxiv.org
    Brain-wide Correspondence Between Neuronal Epigenomics and Long-Distance Projections
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.05.01.538832v1
  122. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10402258/
  123. Aug 2023
  124. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Model-based compound hypothesis testing for snATAC-seq data with PACS
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC10418058/
  125. Apr 2023
  126. www.biorxiv.org www.biorxiv.org
    A Universal Method for Crossing Molecular and Atlas Modalities using Simplex-Based Image Varifolds and Quadratic Programming
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2023.03.28.534622v1
  127. Dec 2022
  128. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Spatial-ID: a cell typing method for spatially resolved transcriptomics via transfer learning and spatial embedding
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9741613/
  129. Sep 2022
  130. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Extending and using anatomical vocabularies in the stimulating peripheral activity to relieve conditions project
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9449460/
  131. Jul 2022
  132. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Evolutionary innovations of human cerebral cortex viewed through the lens of high-throughput sequencing
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    onlinelibrary.wiley.com/doi/10.1002/dneu.22893
  133. Jun 2022
  134. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Brain proteome profiling implicates the complement and coagulation cascade in multiple system atrophy brain pathology
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC9164190/
  135. May 2022
  136. direct.mit.edu direct.mit.edu
    Neuronal classification from network connectivity via adjacency spectral embedding
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    direct.mit.edu/netn/article/5/3/689/99842/Neuronal-classification-from-network-connectivity
  137. www.biorxiv.org www.biorxiv.org
    Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/675280v3
  138. www.biorxiv.org www.biorxiv.org
    Exploiting marker genes for robust classification and characterization of single-cell chromatin accessibility
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.04.01.438068v1
  139. www.biorxiv.org www.biorxiv.org
    EM-LDDMM for 3D to 2D registration
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/604405v1
  140. www.biorxiv.org www.biorxiv.org
    SOAR: a spatial transcriptomics analysis resource to model spatial variability and cell type interactions
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2022.04.17.488596v1
  141. www.biorxiv.org www.biorxiv.org
    Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2021.10.25.465795v1
  142. www.biorxiv.org www.biorxiv.org
    An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    biorxiv.org/content/10.1101/2020.02.29.970558v2
  143. 52.53.155.43 52.53.155.43
    Extending and using anatomical vocabularies in the Stimulating Peripheral Activity to Relieve Conditions (SPARC) program
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    52.53.155.43/d4240805a0a9a6a581fb5d53d6f07042a213e027/2021.11.15.467961.full-html.html
  144. Apr 2022
  145. link.springer.com link.springer.com
    The Composition of Data Capital
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/chapter/10.1007/978-3-030-60192-8_4
  146. www.sciencedirect.com www.sciencedirect.com
    Transcriptomic taxonomy and neurogenic trajectories of adult human, macaque, and pig hippocampal and entorhinal cells
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0896627321008667
  147. www.nature.com www.nature.com
    Scalable dual-omics profiling with single-nucleus chromatin accessibility and mRNA expression sequencing 2 (SNARE-seq2)
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41596-021-00507-3
  148. www.nature.com www.nature.com
    A multimodal cell census and atlas of the mammalian primary motor cortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-021-03950-0
  149. www.cambridge.org www.cambridge.org
    Using MERSCOPE to Generate a Cell Atlas of the Mouse Brain that Includes Lowly Expressed Genes
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    cambridge.org/core/journals/microscopy-today/article/using-merscope-to-generate-a-cell-atlas-of-the-mouse-brain-that-includes-lowly-expressed-genes/FF4789D37BA08A55E41B4BD6C7D7658C
  150. link.springer.com link.springer.com
    Farewell, Neuroinformatics!
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1007/s12021-021-09552-5
  151. Nov 2021
  152. www.science.org www.science.org
    A ‘Rosetta Stone’ for neuroscience: new atlas helps define brain cell types
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    science.org/content/article/rosetta-stone-neuroscience-new-atlas-helps-define-brain-cell-types
  153. www.nature.com www.nature.com
    A census of cell types in the brain’s motor cortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/d41586-021-02493-8
  154. Oct 2021
  155. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Graded heterogeneity of metabotropic signaling underlies a continuum of cell-intrinsic temporal responses in unipolar brush cells
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8497507/
  156. www.nature.com www.nature.com
    Neurobiological functions of transcriptional enhancers
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41593-019-0538-5
  157. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Challenges of Processing and Analyzing Big Data in Mesoscopic Whole-brain Imaging
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC6943785/
  158. www.nature.com www.nature.com
    Innovations present in the primate interneuron repertoire
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-020-2781-z
  159. www.sciencedirect.com www.sciencedirect.com
    The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0092867420304025
  160. www.sciencedirect.com www.sciencedirect.com
    Computational Models of Interoception and Body Regulation
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S0166223620302204
  161. dl.acm.org dl.acm.org
    Cyberinfrastructure of a Multi-Petabyte Microscopy Resource for Neuroscience Research | Practice and Experience in Advanced Research Computing
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    dl.acm.org/doi/abs/10.1145/3311790.3396653
  162. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An atlas of cortical arealization identifies dynamic molecular signatures
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    ncbi.nlm.nih.gov/pmc/articles/PMC8494648/
  163. www.nature.com www.nature.com
    Comparative cellular analysis of motor cortex in human, marmoset and mouse
    2
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-021-03465-8
  164. www.nature.com www.nature.com
    A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41586-021-03500-8
  165. Sep 2021
  166. www.sciencedirect.com www.sciencedirect.com
    Human microglia states are conserved across experimental models and regulate neural stem cell responses in chimeric organoids
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    sciencedirect.com/science/article/pii/S1934590921003763
  167. Jul 2021
  168. www.nature.com www.nature.com
    Organization of the inputs and outputs of the mouse superior colliculus
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41467-021-24241-2
  169. May 2021
  170. www.nature.com www.nature.com
    A community-based transcriptomics classification and nomenclature of neocortical cell types
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41593-020-0685-8
  171. Apr 2021
  172. www.nature.com www.nature.com
    Single-cell atlas of early human brain development highlights heterogeneity of human neuroepithelial cells and early radial glia
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    nature.com/articles/s41593-020-00794-1
  173. Sep 2020
  174. link.springer.com link.springer.com
    Epigenetic modulation of AREL1 and increased HLA expression in brains of multiple system atrophy patients
    1
    Visit annotations in context

    Tags

    Annotators

    URL

    link.springer.com/article/10.1186/s40478-020-00908-7