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Aug 2025
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The elucidation of the dual role of Beclin-1 in ischemic stroke through systems biology modeling

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Feeding-induced olfactory cortex suppression reduces satiation

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sciencedirect.com/science/article/pii/S0896627325005471
Jul 2025
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Multisensory integration for active mechanosensation in Drosophila flight

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Human intelligence relates to neural measures of cognitive map formation

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cell.com/cell-reports/abstract/S2211-1247(25)00804-6
Apr 2025
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Functional characterization of all CDKN2A missense variants and comparison to in silico models of pathogenicity

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Peri-operative anti-inflammatory drug use and seizure recurrence after resective epilepsy surgery: Target trials emulation

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Spatial mapping of gene signatures in H&E-stained images: a proof of concept for interpretable predictions using additive multiple instance learning

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Synaptic deregulation of cholinergic projection neurons causes olfactory dysfunction across five fly Parkinsonism models

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pmc.ncbi.nlm.nih.gov/articles/PMC11968104/
Feb 2025
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Platinum-based chemotherapy induces opposing effects on immunotherapy response-related spatial and stromal biomarkers in the bladder cancer microenvironment

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aacrjournals.org/clincancerres/article/30/18/4227/747456/Platinum-Based-Chemotherapy-Induces-Opposing
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The innate immune landscape of dMMR/MSI cancers predicts outcome of nivolumab treatment: results from the Drug Rediscovery Protocol

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aacrjournals.org/clincancerres/article/30/19/4339/748545/The-Innate-Immune-Landscape-of-dMMR-MSI-Cancers
Jan 2025
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Time-resolved hemispheric lateralization of audiomotor functional connectivity during covert speech production

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sciencedirect.com/science/article/pii/S2211124724014888
Sep 2024
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Circulating Tumor DNA Assessment for Treatment Monitoring Adds Value to PSA in Metastatic Castration Resistant Prostate Cancer

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ncbi.nlm.nih.gov/pmc/articles/PMC11393539/
Jun 2024
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Measurement of ctDNA Tumor Fraction Identifies Informative Negative Liquid Biopsy Results and Informs Value of Tissue Confirmation

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ncbi.nlm.nih.gov/pmc/articles/PMC11145175/
Mar 2024
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Sugar transporters spatially organize microbiota colonization along the longitudinal root axis of Arabidopsis

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sciencedirect.com/science/article/pii/S193131282400057X
Feb 2024
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Overview of methods and available tools used in complex brain disorders

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  DOI: 10.12688/openreseurope.16244.1
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10882203/
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Adolescents’ Pain-Related Ontogeny Shares a Neural Basis with Adults’ Chronic Pain in Basothalamo-Cortical Organisation

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ncbi.nlm.nih.gov/pmc/articles/PMC10845062/
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PUF partner interactions at a conserved interface shape the RNA-binding landscape and cell fate in Caenorhabditis elegans

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ncbi.nlm.nih.gov/pmc/articles/PMC11253550/
Oct 2023
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MEG frequency tagging reveals a grid-like code during attentional movements

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1. scibot 13 Oct 2023
  
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sciencedirect.com/science/article/pii/S2211124723012214
Sep 2023
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Increasing Familiarity With the Heartbeat Counting Task Does Not Affect Performance

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Mitochondrial network adaptations of microglia reveal sex-specific stress response after injury and UCP2 knockout

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ncbi.nlm.nih.gov/pmc/articles/PMC10507162/
Jun 2023
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Metabolic response of microglia to amyloid deposition during Alzheimer’s disease progression in a mouse model

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ncbi.nlm.nih.gov/pmc/articles/PMC10197659/
Mar 2023
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PreprintMatch: A tool for preprint to publication detection shows global inequities in scientific publication

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ER proteostasis regulators cell-non-autonomously control sleep

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europepmc.org/article/med/36924492
Feb 2023
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Transposable elements are associated with genome-specific gene expression in bread wheat

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ncbi.nlm.nih.gov/pmc/articles/PMC9878150/
Dec 2022
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bioRxiv: the preprint server for biology

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2. scibot 03 Dec 2022
  
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  DOI: 10.48550/arXiv.2210.01933
  
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52.53.155.43/8d735b43f3057975b1555f2929ea2e329c4a3939/2210.01933 (1)-html.html
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heart-visual_manuscript_preprint_v1 (1)-html.html

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52.53.155.43/c1903e8ed65cbde32141f286ca06aad9489b0f17/heart-visual_manuscript_preprint_v1 (2)-html.html
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Tract-based white matter hyperintensity patterns in patients with systemic lupus erythematosus using an unsupervised machine learning approach

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  DOI: 10.1038/s41598-022-25990-w
  
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nature.com/articles/s41598-022-25990-w
Oct 2022
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A cis-regulatory lexicon of DNA motif combinations mediating cell-type-specific gene regulation

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Sep 2022
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Ultrastructural analysis of wild-type and RIM1α knockout active zones in a large cortical synapse

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Experimental reproducibility limits the correlation between mRNA and protein abundances in tumor proteomic profiles

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  DOI: 10.1016/j.crmeth.2022.100288
  
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sciencedirect.com/science/article/pii/S2667237522001709
Jul 2022
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Tract-based white matter hyperintensity patterns in patients with Systemic Lupus Erythematosus using an unsupervised machine learning approach

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1. scibot 15 Jul 2022
  
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  DOI: 10.1101/2022.03.04.22271909
  
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medrxiv.org/content/10.1101/2022.03.04.22271909v1
Jun 2022
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A systematic characterization of microglia-like cell occurrence during retinal organoid differentiation.

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52.53.155.43/e4d43df84a4c01101d4a56f054b21f9c50836051/1-s2.0-S2589004222008525-main-html.html
Nov 2021
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Reduced mitochondrial respiration in T cells of patients with major depressive disorder

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1. scibot 09 Nov 2021
  
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  DOI: 10.1016/j.isci.2021.103312
  
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sciencedirect.com/science/article/pii/S2589004221012815
Oct 2021
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Active zone compaction correlates with presynaptic homeostatic potentiation

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  DOI: 10.1016/j.celrep.2021.109770
  
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sciencedirect.com/science/article/pii/S2211124721012249
Sep 2021
elifesciences.org elifesciences.org

Non-linear dimensionality reduction on extracellular waveforms reveals cell type diversity in premotor cortex

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1. scibot 25 Sep 2021
  
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  DOI: 10.7554/eLife.67490
  
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Comprehensive prediction of robust synthetic lethality between paralog pairs in cancer cell lines

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1. scibot 16 Sep 2021
  
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  DOI: 10.1016/j.cels.2021.08.006
  
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sciencedirect.com/science/article/pii/S240547122100329X
Aug 2021
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Evidence and urgency related EEG signals during dynamic decision-making in humans

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1. scibot 07 Aug 2021
  
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  RRID:SCR_016074
  
  DOI: 10.1523/JNEUROSCI.2551-20.2021
  
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jneurosci.org/content/41/26/5711
Jul 2021
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Electrophysiological and molecular characterisation of the parasubiculum

1
1. scibot 31 Jul 2021
  
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  statsmodels
  
  DOI: 10.1523/JNEUROSCI.0796-19.2019
  
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Identification of Neuronal Lineages in the Drosophila Peripheral Nervous System with a “Digital” Multi-spectral Lineage Tracing System

1
1. scibot 29 Jul 2021
  
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  RRID:SCR_016074
  
  DOI: 10.1016/j.celrep.2019.10.124
  
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Close Homolog of L1 Regulates Dendritic Spine Density in the Mouse Cerebral Cortex through Semaphorin 3B

1
1. scibot 29 Jul 2021
  
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  statsmodels
  
  DOI: 10.1523/JNEUROSCI.2984-18.2019
  
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jneurosci.org/content/39/32/6233
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Sox2 and FGF20 interact to regulate organ of Corti hair cell and supporting cell development in a spatially-graded manner

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1. scibot 29 Jul 2021
  
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  DOI: 10.1371/journal.pgen.1008254
  
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Cerebellar disruption impairs working memory during evidence accumulation

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1. scibot 29 Jul 2021
  
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  Statsmodels
  
  DOI: 10.1038/s41467-019-11050-x
  
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Jun 2021
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Integrative transcriptomic analysis of tissue-specific metabolic crosstalk after myocardial infarction

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1. scibot 18 Jun 2021
  
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  DOI: 10.7554/eLife.66921
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8186902/
Apr 2021
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Self-Reporting Transposons Enable Simultaneous Readout of Gene Expression and Transcription Factor Binding in Single Cells

1
1. scibot 24 Apr 2021
  
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  RRID:SCR_016074
  
  DOI: 10.1016/j.cell.2020.06.037
  
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Feb 2021
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Regional, Layer, and Cell-Type-Specific Connectivity of the Mouse Default Mode Network

1
1. scibot 25 Feb 2021
  
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  DOI: 10.1016/j.neuron.2020.11.011
  
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cell.com/neuron/fulltext/S0896-6273(20)30889-8
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Interhemispheric transfer of working memories

1
1. scibot 09 Feb 2021
  
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  DOI: 10.1016/j.neuron.2021.01.016
  
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Nov 2020
onlinelibrary.wiley.com onlinelibrary.wiley.com

Conformational stability of the bacterial adhesin, FimH, with an inactivating mutation

1
1. scibot 20 Nov 2020
  
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  DOI: 10.1002/prot.26013
  
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Oct 2020
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VIP interneurons in mouse primary visual cortex selectively enhance responses to weak but specific stimuli

1
1. scibot 31 Oct 2020
  
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  DOI: 10.7554/eLife.55130
  
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Sep 2020
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Integrative analysis of large-scale loss-of-function screens identifies robust cancer-associated genetic interactions

1
1. scibot 14 Sep 2020
  
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  DOI: 10.7554/eLife.58925
  
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Jan 2020
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Tricalbin-Mediated Contact Sites Control ER Curvature to Maintain Plasma Membrane Integrity

1
1. scibot 13 Jan 2020
  
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  DOI: 10.1016/j.devcel.2019.10.018
  
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sciencedirect.com/science/article/pii/S1534580719308652
Nov 2018
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FGF20-Expressing, Wnt-Responsive Olfactory Epithelial Progenitors Regulate Underlying Turbinate Growth to Optimize Surface Area

1
1. scibot 05 Nov 2018
  
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Hypoexcitability precedes denervation in the large fast-contracting motor units in two unrelated mouse models of ALS

1
1. scibot 05 Nov 2018
  
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A practical tool for maximal information coefficient analysis

1
1. scibot 05 Nov 2018
  
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  Statsmodels
  
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ncbi.nlm.nih.gov/pmc/articles/PMC5893960/