59 Matching Annotations
  1. Sep 2026
  2. www.sciencedirect.com www.sciencedirect.com
    Giant transposable elements drive genetic diversification in Aspergillus oryzae, a domesticated fungus traditionally used in food fermentation
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    sciencedirect.com/science/article/pii/S2589004226027835
  3. www.sciencedirect.com www.sciencedirect.com
    Streptococcus pyogenes carriage is associated with distinct in vivo transcriptional states but not carrier-specific genotypes
    1
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    sciencedirect.com/science/article/pii/S221112472601003X
  4. May 2026
  5. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Sex Chromosome Turnover and Structural Genome Divergence Shapes Meiotic Outcomes in Hybridising Cobitis
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC13175044/
  6. Mar 2026
  7. www.sciencedirect.com www.sciencedirect.com
    Stepwise evolutionary transitions in Cladophorales plastid genomes reveal origins of hairpin chromosomes
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    sciencedirect.com/science/article/pii/S0960982226002253
  8. www.biorxiv.org www.biorxiv.org
    First draft genome of the decaploid species, Ludwigia grandiflora subsp. hexapetala, validated through gene expression
    1
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    biorxiv.org/content/10.64898/2026.03.09.710498v1
  9. Jan 2026
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    AI enhancing differential diagnosis of acute chronic obstructive pulmonary disease and acute heart failure
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12834109/
  11. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Re-sequencing of the complete chloroplast genome of Cinnamomum burmanni (Nees & T.Nees) Blume (Lauraceae) from Indonesia using MinION Oxford Nanopore Technologies
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12790596/
  12. Oct 2025
  13. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Comparative genomics and multiomics analyses reveal the evolution and physiological basis of rubber biosynthesis in Hevea species
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12512020/
  14. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The complete genome assembly of Astragalus membranaceus: enabling more accurate genetic research
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12486382/
  15. Jul 2025
  16. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Bacteriophage infection drives loss of β-lactam resistance in methicillin-resistant Staphylococcus aureus
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    pmc.ncbi.nlm.nih.gov/articles/PMC12245174/
  17. Jun 2025
  18. 52.53.155.43 52.53.155.43
    Chromosome-Level genome assembly and transcriptome analysis of the ural owl, Strix uralensis Pallas, 1771
    2
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    52.53.155.43/7dabfbbd9bff9fd118ed366d51d2c9d870afbb9e/PDF-html.html
  19. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assembly and methylome profile yield insights for the conservation of endangered loggerhead sea turtles
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12143204/
  20. May 2025
  21. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Efficiently constructing complete genomes with CycloneSEQ to fill gaps in bacterial draft assemblies
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12051259/
  22. Apr 2025
  23. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Control of pili synthesis and putrescine homeostasis in Escherichia coli
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    pmc.ncbi.nlm.nih.gov/articles/PMC11968103/
  24. 52.53.155.43 52.53.155.43
    PDF-html.html
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    52.53.155.43/55258fb7cbb5129b8f6a80aa9ec7947c8b76a265/PDF-html.html
  25. Mar 2025
  26. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Long-read metagenomic sequencing negates inferred loss of cytosine methylation in Myxosporea (Cnidaria: Myxozoa)
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11905887/
  27. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11891882/
  28. Jan 2025
  29. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The genome of the sapphire damselfish Chrysiptera cyanea: a new resource to support further investigation of the evolution of Pomacentrids
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11711634/
  30. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Polyploid genome assembly of Cardamine chenopodiifolia
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11693932/
  31. Dec 2024
  32. www.sciencedirect.com www.sciencedirect.com
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
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    sciencedirect.com/science/article/pii/S0092867424012728
  33. Sep 2024
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-speed whole-genome sequencing of a Whippet: Rapid chromosome-level assembly and annotation of an extremely fast dog’s genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11418881/
  35. Aug 2024
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome report: First reference genome of Vaccinium floribundum Kunth, an emblematic Andean species
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11304950/
  37. Jul 2024
  38. www.biorxiv.org www.biorxiv.org
    PathoGFAIR: a collection of FAIR and adaptable (meta)genomics workflows for (foodborne) pathogens detection and tracking
    1
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    biorxiv.org/content/10.1101/2024.06.26.600753v2
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  40. May 2024
  41. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo transcriptome assembly and genome annotation of the fat-tailed dunnart (Sminthopsis crassicaudata)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11091235/
  42. 52.53.155.43 52.53.155.43
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
    1
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    52.53.155.43/cd1f9c7be80d56e211920ba04afd056c82fa391f/2024.02.19.579948.full-html.html
  43. Apr 2024
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Snakemake workflows for long-read bacterial genome assembly and evaluation
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11000499/
  45. www.sciencedirect.com www.sciencedirect.com
    Identification and characterisation of moderately thermostable diisobutyl phthalate degrading esterase from a Great Artesian Basin Bacillus velezensis NP05
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    sciencedirect.com/science/article/pii/S2215017X24000134
  46. Mar 2024
  47. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  48. Jan 2024
  49. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near chromosome-level and highly repetitive genome assembly of the snake pipefish Entelurus aequoreus (Syngnathiformes: Syngnathidae)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10795108/
  50. Sep 2023
  51. 52.53.155.43 52.53.155.43
    jkad203-html.html
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    52.53.155.43/213eef494e744243d5c25ee25ef9fbca7c526326/jkad203-html.html
  52. Aug 2023
  53. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale assembly of the yellow mealworm genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10445852/
  54. Apr 2023
  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10087013/
  56. academic.oup.com academic.oup.com
    GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
  57. academic.oup.com academic.oup.com
    A chromosome-scale high-contiguity genome assembly of the cheetah (Acinonyx jubatus)
    1
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    academic.oup.com/jhered/advance-article/doi/10.1093/jhered/esad015/7069302
  58. Mar 2023
  59. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the deep-sea coral Lophelia pertusa
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10022433/
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nanopore-based enrichment of antimicrobial resistance genes – a case-based study
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10027057/
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    SMARTdenovo: a de novo assembler using long noisy reads
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9632051/
  62. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements in the sequencing and assembly of plant genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631998/
  63. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read assemblies reveal structural diversity in genomes of organelles – an example with Acacia pycnantha
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650277/
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A high-quality draft genome for Melaleuca alternifolia (tea tree): a new platform for evolutionary genomics of myrtaceous terpene-rich species
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650293/
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly and annotation of the tambaqui (Colossoma macropomum): an emblematic fish of the Amazon River Basin
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650303/
  66. Feb 2023
  67. academic.oup.com academic.oup.com
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad005/7049363
  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An updated version of the Madagascar periwinkle genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9902796/
  69. Dec 2022
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  71. Jul 2022
  72. academic.oup.com academic.oup.com
    Chromosome-Level Genome Assembly of the Butter Clam Saxidomus purpuratus
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    academic.oup.com/gbe/article/14/7/evac106/6650251
  73. Jun 2022
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Construction of a new chromosome-scale, long-read reference genome assembly for the Syrian hamster, Mesocricetus auratus
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9155146/
  75. May 2022
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read and chromosome-scale assembly of the hexaploid wheat genome achieves high resolution for research and breeding
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9049114/
  77. Mar 2022
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/
  79. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Fully resolved assembly of Cryptosporidium parvum
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    ncbi.nlm.nih.gov/pmc/articles/PMC8848321/
  80. Jul 2021
  81. academic.oup.com academic.oup.com
    The draft nuclear genome assembly of Eucalyptus pauciflora: a pipeline for comparing de novo assemblies
    1
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    academic.oup.com/gigascience/article/9/1/giz160/5694103
  82. May 2021
  83. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8138834/
  84. Mar 2021
  85. academic.oup.com academic.oup.com
    A chromosome‐level genome of the spider Trichonephila antipodiana reveals the genetic basis of its polyphagy and evidence of an ancient whole-genome duplication event
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    academic.oup.com/gigascience/article/10/3/giab016/6178709
  86. academic.oup.com academic.oup.com
    Chromosome-level genome assemblies of the malaria vectors Anopheles coluzzii and Anopheles arabiensis
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    academic.oup.com/gigascience/article/10/3/giab017/6170950
  87. Feb 2021
  88. academic.oup.com academic.oup.com
    The draft genome sequence of the grove snail Cepaea nemoralis
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    academic.oup.com/g3journal/article-abstract/11/2/jkaa071/6080775
  89. Dec 2020
  90. academic.oup.com academic.oup.com
    Long-read assembly of the Brassica napus reference genome Darmor-bzh
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    academic.oup.com/gigascience/article/9/12/giaa137/6034787
  91. Sep 2020
  92. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
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    pubmed.ncbi.nlm.nih.gov/32947622/
  93. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Construction of a chromosome-scale long-read reference genome assembly for potato
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    pubmed.ncbi.nlm.nih.gov/32964225/