119 Matching Annotations
  1. Last 7 days
  2. www.sciencedirect.com www.sciencedirect.com
    Synaptic plasticity in human thalamocortical assembloids
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    1. scibot 17 Jul 2024
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      DOI: 10.1016/j.celrep.2024.114503

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    sciencedirect.com/science/article/pii/S2211124724008325
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    Mitochondrial perturbation in the intestine causes microbiota-dependent injury and gene signatures discriminative of inflammatory disease
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    1. scibot 16 Jul 2024
      RRID:SCR_017270

      DOI: 10.1016/j.chom.2024.06.013

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    sciencedirect.com/science/article/pii/S1931312824002312
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A prognostic matrix gene expression signature defines functional glioblastoma phenotypes and niches
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    1. scibot 14 Jul 2024
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      DOI: 10.21203/rs.3.rs-4541464/v1

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    ncbi.nlm.nih.gov/pmc/articles/PMC11213219/
  5. www.nature.com www.nature.com
    SLPI overexpression in hMSCs could be implicated in the HSC gene expression profile in AML
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    1. scibot 12 Jul 2024
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      DOI: 10.1038/s41598-024-66400-7

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    2. scibot 12 Jul 2024
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      DOI: 10.1038/s41598-024-66400-7

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    nature.com/articles/s41598-024-66400-7
  6. Jun 2024
  7. www.sciencedirect.com www.sciencedirect.com
    Nicotinamide metabolism face-off between macrophages and fibroblasts manipulates the microenvironment in gastric cancer
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    1. scibot 21 Jun 2024
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      DOI: 10.1016/j.cmet.2024.05.013

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    sciencedirect.com/science/article/pii/S155041312400189X
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    Individual longitudinal changes in DNA-methylome identify signatures of early-life adversity and correlate with later outcome.
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    1. scibot 04 Jun 2024
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      DOI: 10.1016/j.ynstr.2024.100652

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    sciencedirect.com/science/article/pii/S2352289524000481
  9. May 2024
  10. www.sciencedirect.com www.sciencedirect.com
    Reciprocal conversion between annual and polycarpic perennial flowering behavior in the Brassicaceae
    3
    1. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    2. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    3. scibot 30 May 2024
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      DOI: 10.1016/j.cell.2024.04.047

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    sciencedirect.com/science/article/pii/S0092867424004732
  11. aacrjournals.org aacrjournals.org
    Cytogenetic and molecular associations with outcomes in HR-MDS treated with hypomethylating agents plus venetoclax
    1
    1. scibot 23 May 2024
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      DOI: 10.1158/1078-0432.CCR-23-2860

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    aacrjournals.org/clincancerres/article/30/7/1319/741827/Cytogenetic-and-Molecular-Associations-with
  12. 52.53.155.43 52.53.155.43
    ccr-23-2907-html.html
    1
    1. scibot 23 May 2024
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    52.53.155.43/41d915353208947e46d88a61eb38beca559a2aaa/ccr-23-2907-html.html
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Oncogenic drivers and therapeutic vulnerabilities in KRAS wild-type pancreatic cancer
    1
    1. scibot 15 May 2024
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      DOI: 10.1158/1078-0432.CCR-22-3930

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    ncbi.nlm.nih.gov/pmc/articles/PMC10795103/
  14. Apr 2024
  15. www.sciencedirect.com www.sciencedirect.com
    Identification of hypoxic macrophages in glioblastoma with therapeutic potential for vasculature normalization
    1
    1. scibot 20 Apr 2024
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      DOI: 10.1016/j.ccell.2024.03.013

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    sciencedirect.com/science/article/pii/S1535610824001193
  16. aacrjournals.org aacrjournals.org
    Spatial and temporal mapping of breast cancer lung metastases identify TREM2 macrophages as regulators of the metastatic boundary
    1
    1. scibot 19 Apr 2024
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      DOI: 10.1158/2159-8290.CD-23-0299

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    aacrjournals.org/cancerdiscovery/article/13/12/2610/731625/Spatial-and-Temporal-Mapping-of-Breast-Cancer-Lung
  17. Mar 2024
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Inflammatory, metabolic and sex-dependent gene-regulatory dynamics of microglia and macrophages in neonatal hippocampus after hypoxia-ischemia
    2
    1. scibot 22 Mar 2024
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      DOI: 10.1016/j.isci.2024.109346

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    2. scibot 22 Mar 2024
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      DOI: 10.1016/j.isci.2024.109346

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    ncbi.nlm.nih.gov/pmc/articles/PMC10945260/
  19. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Deciphering the spatiotemporal transcriptional and chromatin accessibility of human retinal organoid development at the single-cell level
    1
    1. scibot 22 Mar 2024
      RRID:SCR_017270

      DOI: 10.1016/j.isci.2024.109397

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    ncbi.nlm.nih.gov/pmc/articles/PMC10952046/
  20. 52.53.155.43 52.53.155.43
    HIV-2 MEDIATED EFFECTS ON TARGET AND BYSTANDER CELLS INDUCE PLASMA PROTEOME REMODELLING
    2
    1. scibot 12 Mar 2024
      RRID:SCR_0172

      DOI: 10.1016/j.isci.2024.109344

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    2. scibot 12 Mar 2024
      RRID:SCR_0172

      DOI: 10.1016/j.isci.2024.109344

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    52.53.155.43/da786418a5084198f16fc997d2c488ca198df32d/1-s2.0-S2589004224005650-main-html.html
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Systems immunology of transcriptional responses to viral infection identifies conserved antiviral pathways across macaques and humans
    1
    1. scibot 10 Mar 2024
      RRID:SCR_017270

      DOI: 10.1016/j.celrep.2024.113706

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    ncbi.nlm.nih.gov/pmc/articles/PMC10915397/
  22. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Patient derived tumoroids of high grade neuroendocrine neoplasms for more personalized therapies
    1
    1. scibot 06 Mar 2024
      RRID:SCR_017270

      DOI: 10.1038/s41698-024-00549-2

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    ncbi.nlm.nih.gov/pmc/articles/PMC10907580/
  23. Feb 2024
  24. link.springer.com link.springer.com
    A transient protein folding response targets aggregation in the early phase of TDP-43-mediated neurodegeneration
    1
    1. scibot 22 Feb 2024
      RRID:SCR_017270

      DOI: 10.1038/s41467-024-45646-9

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    link.springer.com/article/10.1038/s41467-024-45646-9
  25. www.sciencedirect.com www.sciencedirect.com
    Spatio-molecular profiles shape the human cerebellar hierarchy along the sensorimotor-association axis
    1
    1. scibot 18 Feb 2024
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      DOI: 10.1016/j.celrep.2024.113770

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    sciencedirect.com/science/article/pii/S2211124724000986
  26. www.biorxiv.org www.biorxiv.org
    Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome
    1
    1. scibot 15 Feb 2024
      RRID:SCR_017270

      DOI: 10.1101/2023.12.16.571594

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    biorxiv.org/content/10.1101/2023.12.16.571594v1
  27. www.nature.com www.nature.com
    A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1
    2
    1. scibot 08 Feb 2024
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      DOI: 10.1038/s41467-024-45067-8

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    2. scibot 08 Feb 2024
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      DOI: 10.1038/s41467-024-45067-8

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    nature.com/articles/s41467-024-45067-8
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative transcriptomic analysis of bovine mesenchymal stromal cells reveals tissue-source and species-specific differences
    1
    1. scibot 08 Feb 2024
      RRID:SCR_017270

      DOI: 10.1016/j.isci.2024.108886

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    ncbi.nlm.nih.gov/pmc/articles/PMC10838956/
  29. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Immunogenomic Landscape of Neuroendocrine Prostate Cancer
    1
    1. scibot 02 Feb 2024
      RRID:SCR_017270

      DOI: 10.1158/1078-0432.CCR-22-3743

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    ncbi.nlm.nih.gov/pmc/articles/PMC10524949/
  30. Jan 2024
  31. link.springer.com link.springer.com
    Molecular characteristics and improved survival prediction in a cohort of 2023 ependymomas
    1
    1. scibot 25 Jan 2024
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      DOI: 10.1007/s00401-023-02674-x

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    link.springer.com/article/10.1007/s00401-023-02674-x
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    TRIB3, as a robust prognostic biomarker for HNSC, is associated with poor immune infiltration and cancer cell immune evasion
    1
    1. scibot 19 Jan 2024
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      DOI: 10.3389/fimmu.2023.1290839

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    ncbi.nlm.nih.gov/pmc/articles/PMC10791810/
  33. www.sciencedirect.com www.sciencedirect.com
    Response to Bruton’s tyrosine kinase inhibitors in aggressive lymphomas linked to chronic selective autophagy
    1
    1. scibot 12 Jan 2024
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      DOI: 10.1016/j.ccell.2023.12.019

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    sciencedirect.com/science/article/pii/S1535610823004476
  34. www.biorxiv.org www.biorxiv.org
    Within-subject changes in methylome profile identify individual signatures of early-life adversity, with a potential to predict neuropsychiatric outcome
    1
    1. scibot 12 Jan 2024
      RRID:SCR_017270

      DOI: 10.1101/2023.12.16.571594

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    biorxiv.org/content/10.1101/2023.12.16.571594v1
  35. Dec 2023
  36. www.mdpi.com www.mdpi.com
    High Expression of THY1 in Intestinal Gastric Cancer as a Key Factor in Tumor Biology: A Poor Prognosis-Independent Marker Related to the Epithelial–Mesenchymal Transition Profile
    1
    1. scibot 29 Dec 2023
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      DOI: 10.3390/genes15010028

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    mdpi.com/2073-4425/15/1/28
  37. www.sciencedirect.com www.sciencedirect.com
    Integrated multi-omics profiling to dissect the spatiotemporal evolution of metastatic hepatocellular carcinoma
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    1. scibot 16 Dec 2023
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      DOI: 10.1016/j.ccell.2023.11.010

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    sciencedirect.com/science/article/pii/S1535610823004014
  38. 52.53.155.43 52.53.155.43
    cd-23-0299-html.html
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      DOI: 10.1158/2159-8290.cd-23-0299

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    52.53.155.43/2b6c279d82b7a0e0d491057f5790a1189e93077e/cd-23-0299-html.html
  39. Nov 2023
  40. www.sciencedirect.com www.sciencedirect.com
    Structured wound angiogenesis instructs mesenchymal barrier compartments in the regenerating nerve
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      DOI: 10.1016/j.neuron.2023.10.025

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    sciencedirect.com/science/article/pii/S0896627323008061
  41. 52.53.155.43 52.53.155.43
    schall-latham-2023-predictive-modeling-of-oocyte-maternal-mrna-features-of-five-mammalian-species-reveals-potential (1)-html.html
    1
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      DOI: 10.6084/m9.figshare.22674448.v1

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    52.53.155.43/b38c22d2b0c9591d1f12b114a1f97bc735ea3c68/schall-latham-2023-predictive-modeling-of-oocyte-maternal-mrna-features-of-five-mammalian-species-reveals-potential (1)-html.html
  42. Oct 2023
  43. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Evaluation of risdiplam efficacy in 5q spinal muscular atrophy: A systematic comparison of electrophysiologic with clinical outcome measures
    1
    1. scibot 20 Oct 2023
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      DOI: 10.1111/ene.16099

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    onlinelibrary.wiley.com/doi/10.1111/ene.16099
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A prognostic matrix code defines functional glioblastoma phenotypes and niches
    1
    1. scibot 12 Oct 2023
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      DOI: 10.21203/rs.3.rs-3285842/v1

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    ncbi.nlm.nih.gov/pmc/articles/PMC10543369/
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Targeting MALAT1 Augments Sensitivity to PARP Inhibition by Impairing Homologous Recombination in Prostate Cancer
    1
    1. scibot 12 Oct 2023
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      DOI: 10.1158/2767-9764.CRC-23-0089

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    ncbi.nlm.nih.gov/pmc/articles/PMC10561629/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Colorectal Cancer Organoid–Stroma Biobank Allows Subtype-Specific Assessment of Individualized Therapy Responses
    1
    1. scibot 07 Oct 2023
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      DOI: 10.1158/2159-8290.CD-23-0050

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    ncbi.nlm.nih.gov/pmc/articles/PMC10551667/
  47. 52.53.155.43 52.53.155.43
    ccr-23-0513-html.html
    1
    1. scibot 07 Oct 2023
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      DOI: 10.1158/1078-0432.ccr-23-0513

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  48. Sep 2023
  49. www.sciencedirect.com www.sciencedirect.com
    Single-cell atlas reveals correlates of high cognitive function, dementia, and resilience to Alzheimer’s disease pathology
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  50. 52.53.155.43 52.53.155.43
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  51. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Metabolic signature and proteasome activity controls synovial migration of CDC42hi CD14+ cells in rheumatoid arthritis
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  52. Aug 2023
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    Transplantation elicits a clonally diverse CD8+ T cell response that is comprised of potent CD43+ effectors
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  54. 52.53.155.43 52.53.155.43
    AmpSeqR: an R package for amplicon deep sequencing data analysis
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  55. 52.53.155.43 52.53.155.43
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  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Down Syndrome is Associated with Altered Frequency and Functioning of Tracheal Multiciliated Cells, and Response to Influenza Virus Infection
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    Tomatidine targets ATF4-dependent signaling and induces ferroptosis to limit pancreatic cancer progression
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    A comparison of the impact on neuronal transcriptome and cognition of rAAV5 transduction with three different doses in the mouse hippocampus
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  59. Jul 2023
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    The stability of the myelinating oligodendrocyte transcriptome is regulated by the nuclear lamina
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    Premature aging and reduced cancer incidence associated with near-complete body-wide Myc inactivation
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    Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition
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    Immunological modifications following chemotherapy are associated with delayed recurrence of ovarian cancer
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    Inter- and intra-tumor heterogeneity of genetic and immune profiles in inherited renal cell carcinoma
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    Controlling genetic heterogeneity in gene-edited hematopoietic stem cells by single-cell expansion
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  66. Jun 2023
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    Autism-linked UBE3A gain-of-function mutation causes interneuron and behavioral phenotypes when inherited maternally or paternally in mice
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    Extracellular vesicle-associated IGF2BP3 tunes Ewing sarcoma cell migration and affects PI3K/Akt pathway in neighboring cells
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    Microsatellite instability states serve as predictive biomarkers for tumors chemotherapy sensitivity
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    Transcriptomic landscape of early hair follicle and epidermal development
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    The maturation and aging trajectory of Marchantia polymorpha at single-cell resolution
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    Metabolic signature and proteasome activity controls synovial migration of CDC42hiCD14+ cells in rheumatoid arthritis
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    A prognostic matrix code defines functional glioblastoma phenotypes and niches
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    ROS Induction Targets Persister Cancer Cells with Low Metabolic Activity in NRAS-Mutated Melanoma
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  75. May 2023
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Developmental dynamics of chromatin accessibility during post-implantation development of monkey embryos
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    Genome assembly of an Australian native grass species reveals a recent whole-genome duplication and biased gene retention of genes involved in stress response
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    Atypical Neurofibromas reveal distinct epigenetic features with proximity to benign peripheral nerve sheath tumor entities
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    Ultra High-plex Spatial Proteogenomic Investigation of Giant Cell Glioblastoma Multiforme Immune Infiltrates Reveals Distinct Protein and RNA Expression Profiles
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  80. Mar 2023
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    Expression of down-regulated ERV LTR elements associates with immune activation in human small-cell lung cancers
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  82. Feb 2023
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    Single-cell RNA-seq analysis reveals dual sensing of HIV-1 in blood Axl+ dendritic cells
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  84. Jan 2023
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    Cancer stem cells, not bulk tumor cells, determine mechanisms of resistance to SMO inhibitors
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    Intratumoral Heterogeneity and Immune Modulation in Lung Adenocarcinoma in Female Smokers and Never Smokers
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    Integrated Molecular Characterization of Patient-Derived Models Reveals Therapeutic Strategies for Treating CIC-DUX4 Sarcoma
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    Microbial glutamate metabolism predicts intravenous cocaine self-administration in diversity outbred mice
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  89. Dec 2022
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    Persistent depression in pregnant refugee and migrant women living along the Thai-Myanmar Border: a secondary qualitative analysis.
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    Deciphering Transcriptional Networks during Human Cardiac Development
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    Quantitative Spatial Profiling of Immune Populations in Pancreatic Ductal Adenocarcinoma Reveals Tumor Microenvironment Heterogeneity and Prognostic Biomarkers
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  93. Nov 2022
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    Systematic single-cell pathway analysis to characterize early T cell activation
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    Lipid metabolic reprogramming extends beyond histological tumor demarcations in operable human pancreatic cancer
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  96. Oct 2022
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  98. Sep 2022
  99. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Biological misinterpretation of transcriptional signatures in tumor samples can unknowingly undermine mechanistic understanding and faithful alignment with preclinical data
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  100. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Tumor Cell Extrinsic Synaptogyrin 3 Expression as a Diagnostic and Prognostic Biomarker in Head and Neck Cancer
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    Human gut microbiota stimulate defined innate immune responses that vary from phylum to strain
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  102. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Interrogation of T Cell-Enriched Tumors Reveals Prognostic and Immunotherapeutic Implications of Polyamine Metabolism
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  103. Aug 2022
  104. 52.53.155.43 52.53.155.43
    Comparative phosphoproteomic profiling in the prefrontal cortex of prenatally stressed male offspring rats
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  105. 52.53.155.43 52.53.155.43
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  106. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Antibiotic resistance genes are differentially mobilized according to resistance mechanism
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  107. Jul 2022
  108. 52.53.155.43 52.53.155.43
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  109. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Neoadjuvant chemotherapy induces genomic and transcriptomic changes in ovarian cancer
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  110. Jun 2022
  111. aacrjournals.org aacrjournals.org
    Cancer Stem Cells, not Bulk Tumor Cells, Determine Mechanisms of Resistance to SMO Inhibitors
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  112. www.sciencedirect.com www.sciencedirect.com
    Absence of microglia promotes diverse pathologies and early lethality in Alzheimer’s disease mice
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    The Mutational Signature Comprehensive Analysis Toolkit (musicatk) for the discovery, prediction, and exploration of mutational signatures
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  114. May 2022
  115. academic.oup.com academic.oup.com
    Comprehensive profiling of myxopapillary ependymomas identifies a distinct molecular subtype with relapsing disease
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  116. f1000research.com f1000research.com
    F1000Research Article: The third international hackathon for applying insights into large-scale genomic composition to use cases in a wide range of organisms.
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    A cytotoxic-skewed immune set point predicts low neutralizing antibody levels after Zika virus infection
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  118. Mar 2022
  119. www.sciencedirect.com www.sciencedirect.com
    PRMT7 ablation stimulates anti-tumor immunity and sensitizes melanoma to immune checkpoint blockade
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    sciencedirect.com/science/article/pii/S2211124722003266
  120. www.sciencedirect.com www.sciencedirect.com
    Pathogen size alters C-type lectin receptor signaling in dendritic cells to influence CD4 Th9 cell differentiation
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  121. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative analysis of common alignment tools for single-cell RNA sequencing
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  122. Feb 2022
  123. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell analysis of human glioma and immune cells identifies S100A4 as an immunotherapy target
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  124. Jan 2022
  125. www.sciencedirect.com www.sciencedirect.com
    Dynamic chromatin state profiling reveals regulatory roles of auxin and cytokinin in shoot regeneration
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    sciencedirect.com/science/article/pii/S153458072101039X
  126. Nov 2021
  127. 52.53.155.43 52.53.155.43
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  128. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Integrated Genomic Profiling and Drug Screening of Patient-Derived Cultures Identifies Individualized Copy Number-Dependent Susceptibilities Involving PI3K Pathway and 17q Genes in Neuroblastoma
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  129. Aug 2021
  130. elifesciences.org elifesciences.org
    HOXA9 promotes MYC-mediated leukemogenesis by maintaining gene expression for multiple anti-apoptotic pathways
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      DOI: 10.7554/eLife.64148

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  131. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The COVIDome Explorer researcher portal
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  132. Jul 2021
  133. www.sciencedirect.com www.sciencedirect.com
    Deletion of RBMX RGG/RG motif in Shashi-XLID syndrome leads to aberrant p53 activation and neuronal differentiation defects
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  134. Jun 2021
  135. www.sciencedirect.com www.sciencedirect.com
    The CTNNBIP1-CLSTN1 fusion transcript regulates human neocortical development
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    sciencedirect.com/science/article/pii/S2211124721006616
  136. May 2021
  137. www.sciencedirect.com www.sciencedirect.com
    Individuals at risk for rheumatoid arthritis harbor differential intestinal bacteriophage communities with distinct metabolic potential
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  138. www.sciencedirect.com www.sciencedirect.com
    A single-cell analysis of the Arabidopsis vegetative shoot apex
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    sciencedirect.com/science/article/pii/S1534580721001611
  139. www.sciencedirect.com www.sciencedirect.com
    Chromatin Accessibility Dynamics and a Hierarchical Transcriptional Regulatory Network Structure for Plant Somatic Embryogenesis
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  140. Mar 2021
  141. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Seroconversion stages COVID19 into distinct pathophysiological states
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      DOI: 10.7554/eLife.65508

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  142. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Microglial trogocytosis and the complement system regulate axonal pruning in vivo
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      DOI: 10.7554/eLife.62167

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  143. Jan 2021
  144. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Homogentisic acid induces cytoskeleton and extracellular matrix alteration in alkaptonuric cartilage
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      DOI: 10.1002/jcp.30284

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    onlinelibrary.wiley.com/doi/10.1002/jcp.30284
  145. www.sciencedirect.com www.sciencedirect.com
    QUAKING Regulates Microexon Alternative Splicing of the Rho GTPase Pathway and Controls Microglia Homeostasis
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  146. Sep 2020
  147. www.sciencedirect.com www.sciencedirect.com
    Imprinted Maternally Expressed microRNAs Antagonize Paternally Driven Gene Programs in Neurons
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  148. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Late-life restoration of mitochondrial function reverses cardiac dysfunction in old mice
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    ncbi.nlm.nih.gov/pmc/articles/PMC7377906/
  149. Jan 2020
  150. www.sciencedirect.com www.sciencedirect.com
    Generation of Blastocyst-like Structures from Mouse Embryonic and Adult Cell Cultures
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