48 Matching Annotations
  1. Last 7 days
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere genome assembly of koi carp (Cyprinus carpio) using long reads and Hi-C technology
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12395963/
  3. Jul 2025
  4. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    A telomere-to-telomere gapless genome reveals SlPRR1 control of circadian rhythm and photoperiodic flowering in tomato
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12218202/
  5. May 2025
  6. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-level genome assemblies of five Sinocyclocheilus species
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    pmc.ncbi.nlm.nih.gov/articles/PMC12089701/
  7. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Chromosome-scale assemblies of three Ormosia species: repetitive sequences distribution and structural rearrangement
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC12083454/
  8. dx.doi.org dx.doi.org
    Telomere-to-telomere genome of common bean (Phaseolus vulgaris L., YP4)
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    dx.doi.org/10.1093/gigascience/giaf001
  9. Mar 2025
  10. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The assembly and annotation of two teinturier grapevine varieties, Dakapo and Rubired
    1
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    pmc.ncbi.nlm.nih.gov/articles/PMC11891882/
  11. Feb 2025
  12. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    The telomere-to-telomere genome of flowering cherry (Prunus campanulata) reveals genomic evolution of the subgenus Cerasus
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    pmc.ncbi.nlm.nih.gov/articles/PMC11843098/
  13. Dec 2024
  14. www.sciencedirect.com www.sciencedirect.com
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
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    sciencedirect.com/science/article/pii/S0092867424012728
  15. Sep 2024
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    High-speed whole-genome sequencing of a Whippet: Rapid chromosome-level assembly and annotation of an extremely fast dog’s genome
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    ncbi.nlm.nih.gov/pmc/articles/PMC11418881/
  17. Aug 2024
  18. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  19. Jul 2024
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The reference genome sequence of Artemisia argyi provides insights into secondary metabolism biosynthesis
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC11239399/
  21. May 2024
  22. 52.53.155.43 52.53.155.43
    Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems
    1
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    52.53.155.43/cd1f9c7be80d56e211920ba04afd056c82fa391f/2024.02.19.579948.full-html.html
  23. Apr 2024
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Snakemake workflows for long-read bacterial genome assembly and evaluation
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    ncbi.nlm.nih.gov/pmc/articles/PMC11000499/
  25. Sep 2023
  26. www.sciencedirect.com www.sciencedirect.com
    Characterization of the male-specific region containing the candidate sex-determining gene in Amur catfish (Silurus asotus) using third-generation- and pool-sequencing data
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    sciencedirect.com/science/article/pii/S0141813023028039
  27. Aug 2023
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-scale assembly of the yellow mealworm genome
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    ncbi.nlm.nih.gov/pmc/articles/PMC10445852/
  29. Jul 2023
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The Australasian dingo archetype: de novo chromosome-length genome assembly, DNA methylome, and cranial morphology
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10353722/
  31. Apr 2023
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Molecular mechanisms underlying hematophagia revealed by comparative analyses of leech genomes
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    ncbi.nlm.nih.gov/pmc/articles/PMC10087013/
  33. Mar 2023
  34. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of the roundjaw bonefish (Albula glossodonta), a vulnerable circumtropical sportfish
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10038134/
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Nanopore-based enrichment of antimicrobial resistance genes – a case-based study
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    ncbi.nlm.nih.gov/pmc/articles/PMC10027057/
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A highly contiguous, scaffold-level nuclear genome assembly for the fever tree (Cinchona pubescens Vahl) as a novel resource for Rubiaceae research
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC10027117/
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of a benthic associated Syngnathiformes species: the common dragonet, Callionymus lyra
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9631949/
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  39. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Long-read assemblies reveal structural diversity in genomes of organelles – an example with Acacia pycnantha
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9650277/
  40. 52.53.155.43 52.53.155.43
    A chromosome-scale reference genome assembly of the great sand eel, Hyperoplus lanceolatus
    1
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    52.53.155.43/c66fa9b2ea7c129831e4f3a5d878c6edc0d7a347/esad003-html.html
  41. Feb 2023
  42. www.biorxiv.org www.biorxiv.org
    The Australasian dingo archetype: De novo chromosome-length genome assembly, DNA methylome, and cranial morphology
    1
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    biorxiv.org/content/10.1101/2023.01.26.525801v1
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of Musa beccarii shows extensive chromosomal rearrangements and genome expansion during evolution of Musaceae genomes
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9941839/
  44. Dec 2022
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
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    ncbi.nlm.nih.gov/pmc/articles/PMC9795480/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  47. Jul 2022
  48. 52.53.155.43 52.53.155.43
    A chromosome-scale genome assembly of the okapi (Okapia johnstoni)
    1
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    52.53.155.43/ca38f07792210b0253061a6791db53fa681aee2f/esac033-html.html
  49. academic.oup.com academic.oup.com
    A chromosome-level genome assembly and intestinal transcriptome of Trypoxylus dichotomus (Coleoptera: Scarabaeidae) to understand its lignocellulose digestion ability
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac059/6619297
  50. Jun 2022
  51. academic.oup.com academic.oup.com
    A chromosome-level genome assembly of Artocarpus nanchuanensis (Moraceae), an extremely endangered fruit tree
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac042/6608506
  52. May 2022
  53. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
    1
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    gigabytejournal.com/articles/51
  54. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level reference genome of Ensete glaucum gives insight into diversity and chromosomal and repetitive sequence evolution in the Musaceae
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC9055855/
  55. Apr 2022
  56. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching
    1
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    sciencedirect.com/science/article/pii/S2211124722003904
  57. Mar 2022
  58. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/
  59. Jan 2022
  60. academic.oup.com academic.oup.com
    Chromosome-level genome assembly of the shuttles hoppfish, Periophthalmus modestus
    1
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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giab089/6505119
  61. Oct 2021
  62. academic.oup.com academic.oup.com
    Chromosome-level genome assemblies of Channa argus and Channa maculata and comparative analysis of their temperature adaptability
    1
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    academic.oup.com/gigascience/article/10/10/giab070/6407244
  63. May 2021
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Two high-quality de novo genomes from single ethanol-preserved specimens of tiny metazoans (Collembola)
    1
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    ncbi.nlm.nih.gov/pmc/articles/PMC8138834/
  65. Apr 2021
  66. academic.oup.com academic.oup.com
    A chromosome-level reference genome of the hazelnut, Corylus heterophylla Fisch
    1
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    academic.oup.com/gigascience/article/10/4/giab027/6237163
  67. Mar 2021
  68. academic.oup.com academic.oup.com
    Genome sequence and genetic diversity analysis of an under-domesticated orphan crop, white fonio (Digitaria exilis)
    1
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    academic.oup.com/gigascience/article/10/3/giab013/6168810
  69. Jan 2021
  70. academic.oup.com academic.oup.com
    Comparison of long-read methods for sequencing and assembly of a plant genome
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    academic.oup.com/gigascience/article/9/12/giaa146/6042729
  71. Dec 2020
  72. academic.oup.com academic.oup.com
    Long-read assembly of the Brassica napus reference genome Darmor-bzh
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    academic.oup.com/gigascience/article/9/12/giaa137/6034787
  73. academic.oup.com academic.oup.com
    Comparison of the two up-to-date sequencing technologies for genome assembly: HiFi reads of Pacific Biosciences Sequel II system and ultralong reads of Oxford Nanopore
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    academic.oup.com/gigascience/article/9/12/giaa123/6034784
  74. Sep 2020
  75. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Construction of a chromosome-scale long-read reference genome assembly for potato
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    pubmed.ncbi.nlm.nih.gov/32964225/
  76. pubmed.ncbi.nlm.nih.gov pubmed.ncbi.nlm.nih.gov
    Long-read only assembly of Drechmeria coniospora genomes reveals widespread chromosome plasticity and illustrates the limitations of current nanopore methods
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    pubmed.ncbi.nlm.nih.gov/32947622/
  77. academic.oup.com academic.oup.com
    TGS-GapCloser: A fast and accurate gap closer for large genomes with low coverage of error-prone long reads
    1
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    academic.oup.com/gigascience/article/9/9/giaa094/5902284
  78. academic.oup.com academic.oup.com
    Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C
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    academic.oup.com/gigascience/article/9/4/giaa027/5813919
  79. academic.oup.com academic.oup.com
    Chromosome-level genome assembly and annotation of the loquat ( Eriobotrya japonica ) genome
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    academic.oup.com/gigascience/article/9/3/giaa015/5788433