65 Matching Annotations
  1. Last 7 days
  2. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proteogenomic and V(D)J Analysis of Human Decidual T cells Highlights Unique Transcriptional Programming and Clonal Distribution
    1
    1. scibot 03 Jul 2024
      RRID:SCR_017759

      DOI: 10.4049/jimmunol.2200061

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    ncbi.nlm.nih.gov/pmc/articles/PMC10330249/
  3. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Diminished Immune Cell Adhesion in Hypoimmune ICAM-1 Knockout Pluripotent Stem Cells
    1
    1. scibot 27 Jun 2024
      RRID:SCR_017759

      DOI: 10.1101/2024.06.07.597791

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    ncbi.nlm.nih.gov/pmc/articles/PMC11185752/
  4. Jun 2024
  5. www.biorxiv.org www.biorxiv.org
    Dietary isoleucine content defines the metabolic and molecular response to a Western diet
    1
    1. scibot 07 Jun 2024
      SCR_017759

      DOI: 10.1101/2024.05.30.596340

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    biorxiv.org/content/10.1101/2024.05.30.596340v1
  6. www.biorxiv.org www.biorxiv.org
    The 9p21.3 coronary artery disease risk locus drives vascular smooth muscle cells to osteo-chondrogenic state
    1
    1. scibot 06 Jun 2024
      RRID:SCR_017759

      DOI: 10.1101/2024.05.25.595888

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    biorxiv.org/content/10.1101/2024.05.25.595888v1
  7. May 2024
  8. www.biorxiv.org www.biorxiv.org
    Seed endophytes of malting barley from different locations are shaped differently and are associated with malt quality traits
    1
    1. scibot 17 May 2024
      RRID:SCR_017759

      DOI: 10.1101/2024.05.12.593598

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    biorxiv.org/content/10.1101/2024.05.12.593598v1
  9. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell transcriptomic profiling of the neonatal oviduct and uterus reveals new insights into upper Müllerian duct regionalization
    1
    1. scibot 17 May 2024
      RRID:SCR_017759

      DOI: 10.1096/fj.202400303R

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    ncbi.nlm.nih.gov/pmc/articles/PMC11095678/
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Unveiling the co-phylogeny signal between plunderfish Harpagifer spp. and their gut microbiomes across the Southern Ocean
    1
    1. scibot 15 May 2024
      RRID:SCR_017759

      DOI: 10.1128/spectrum.03830-23

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10986581/
  11. www.science.org www.science.org
    Genomic factors shape carbon and nitrogen metabolic niche breadth across Saccharomycotina yeasts
    1
    1. scibot 03 May 2024
      RRID:SCR_017759

      DOI: 10.1126/science.adj4503

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    science.org/doi/10.1126/science.adj4503
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    CUT&Tag Applied to Zebrafish Adult Tail Fins Reveals a Return of Embryonic H3K4me3 Patterns During Regeneration
    1
    1. scibot 01 May 2024
      RRID:SCR_017759

      DOI: 10.21203/rs.3.rs-4189493/v1

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    ncbi.nlm.nih.gov/pmc/articles/PMC11030498/
  13. Apr 2024
  14. www.biorxiv.org www.biorxiv.org
    Single-cell transcriptional landscape of temporal neutrophil response to burn wound in larval zebrafish
    1
    1. scibot 12 Apr 2024
      RRID:SCR_017759

      DOI: 10.1101/2024.04.01.587641

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    biorxiv.org/content/10.1101/2024.04.01.587641v1
  15. Mar 2024
  16. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Refinement of the “Candidatus Accumulibacter” genus based on metagenomic analysis of biological nutrient removal (BNR) pilot-scale plants operated with reduced aeration
    1
    1. scibot 22 Mar 2024
      RRID:SCR_017759

      DOI: 10.1128/msystems.01188-23

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10949500/
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A High-Quality Blue Whale Genome, Segmental Duplications, and Historical Demography
    1
    1. scibot 09 Mar 2024
      RRID:SCR_017759

      DOI: 10.1093/molbev/msae036

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10919930/
  18. Feb 2024
  19. www.biorxiv.org www.biorxiv.org
    Complex Hybridization in a Clade of Polytypic Salamanders (Plethodontidae: Desmognathus) Uncovered by Estimating Higher-Level Phylogenetic Networks
    1
    1. scibot 17 Feb 2024
      RRID:SCR_017759

      DOI: 10.1101/2024.01.29.577868

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    biorxiv.org/content/10.1101/2024.01.29.577868v1
  20. www.biorxiv.org www.biorxiv.org
    Harnessing the regenerative potential of interleukin11 to enhance heart repair
    1
    1. scibot 17 Feb 2024
      RRID:SCR_017759

      DOI: 10.1101/2024.01.29.577788

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    biorxiv.org/content/10.1101/2024.01.29.577788v1
  21. www.biorxiv.org www.biorxiv.org
    Single-cell transcriptomic profiling of the neonatal oviduct and uterus reveals new insights into upper Müllerian duct regionalization
    1
    1. scibot 15 Feb 2024
      RRID:SCR_017759

      DOI: 10.1101/2023.12.20.572607

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    biorxiv.org/content/10.1101/2023.12.20.572607v2
  22. www.biorxiv.org www.biorxiv.org
    Complete genomic assembly of Mauritian cynomolgus macaque killer immunoglobulin-like receptor and natural killer group 2 haplotypes
    1
    1. scibot 09 Feb 2024
      RRID:SCR_017759

      DOI: 10.1101/2023.12.10.570943

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    biorxiv.org/content/10.1101/2023.12.10.570943v1
  23. Jan 2024
  24. nph.onlinelibrary.wiley.com nph.onlinelibrary.wiley.com
    Death caps (Amanita phalloides) frequently establish from sexual spores, but individuals can grow large and live for more than a decade in invaded forests
    2
    1. scibot 07 Jan 2024
      RRID:SCR_017759

      DOI: 10.1111/nph.19483

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    2. scibot 07 Jan 2024
      RRID:SCR_017759

      DOI: 10.1111/nph.19483

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    nph.onlinelibrary.wiley.com/doi/10.1111/nph.19483
  25. Dec 2023
  26. www.sciencedirect.com www.sciencedirect.com
    Earthworm co-invasion by Amynthas tokioensis and Amynthas agrestis affects soil microaggregate bacterial communities
    1
    1. scibot 14 Dec 2023
      RRID:SCR_017759

      DOI: 10.1016/j.apsoil.2023.105224

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    sciencedirect.com/science/article/pii/S0929139323004225
  27. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial genome diversity across the subphylum Saccharomycotina
    1
    1. scibot 10 Dec 2023
      RRID:SCR_017759

      DOI: 10.3389/fmicb.2023.1268944

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10701893/
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Metagenomic sequencing detects human respiratory and enteric viruses in air samples collected from congregate settings
    1
    1. scibot 07 Dec 2023
      RRID:SCR_017759

      DOI: 10.1038/s41598-023-48352-6

      Resource: Wisconsin-Madison University Biotechnology Center DNA Sequencing Core Facility (RRID:SCR_017759)

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    ncbi.nlm.nih.gov/pmc/articles/PMC10696062/
  29. www.biorxiv.org www.biorxiv.org
    Refinement of the “Candidatus Accumulibacter” Genus Based on a Metagenomic Analysis of Biological Nutrient Removal (BNR) Pilot-Scale Plants Operated with Reduced Aeration
    1
    1. scibot 01 Dec 2023
      RRID:SCR_017759

      DOI: 10.1101/2023.11.20.567894

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    biorxiv.org/content/10.1101/2023.11.20.567894v1
  30. Nov 2023
  31. journals.asm.org journals.asm.org
    Ectopic expression of murine CD163 enables cell-culture isolation of lactate dehydrogenase-elevating virus 63 years after its discovery
    3
    1. scibot 18 Nov 2023
      RRID:SCR_017759

      DOI: 10.1128/jvi.00930-23

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    2. scibot 04 Nov 2023
      RRID:SCR_017759

      DOI: 10.1128/jvi.00930-23

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    3. scibot 04 Nov 2023
      RRID:SCR_017759

      DOI: 10.1128/jvi.00930-23

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    journals.asm.org/doi/10.1128/jvi.00930-23
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A tessellated lymphoid network provides whole-body T cell surveillance in zebrafish
    1
    1. scibot 11 Nov 2023
      RRID:SCR_017759

      DOI: 10.1073/pnas.2301137120

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    ncbi.nlm.nih.gov/pmc/articles/PMC10193988/
  33. Oct 2023
  34. www.nature.com www.nature.com
    Invasive Californian death caps develop mushrooms unisexually and bisexually
    1
    1. scibot 27 Oct 2023
      RRID:SCR_017759

      DOI: 10.1038/s41467-023-42317-z

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    nature.com/articles/s41467-023-42317-z
  35. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Single-cell RNA sequencing of neurofibromas reveals a tumor microenvironment favorable for neural regeneration and immune suppression in a neurofibromatosis type 1 porcine model
    1
    1. scibot 12 Oct 2023
      SCR_017759

      DOI: 10.3389/fonc.2023.1253659

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    ncbi.nlm.nih.gov/pmc/articles/PMC10561395/
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    CD8+ cells and small viral reservoirs facilitate post-ART control of SIV replication in M3+ Mauritian cynomolgus macaques initiated on ART two weeks post-infection
    1
    1. scibot 07 Oct 2023
      RRID:SCR_017759

      DOI: 10.1371/journal.ppat.1011676

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    ncbi.nlm.nih.gov/pmc/articles/PMC10553806/
  37. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Liver and Muscle Transcriptomes Differ in Mid-Lactation Cows Divergent in Feed Efficiency in the Presence or Absence of Supplemental Rumen-Protected Choline
    1
    1. scibot 05 Oct 2023
      RRID:SCR_017759

      DOI: 10.3390/metabo13091023

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    ncbi.nlm.nih.gov/pmc/articles/PMC10536747/
  38. Sep 2023
  39. www.biorxiv.org www.biorxiv.org
    Discovering chromatin dysregulation induced by protein-coding perturbations at scale
    1
    1. scibot 30 Sep 2023
      RRID:SCR_017759

      DOI: 10.1101/2023.09.20.555752

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    biorxiv.org/content/10.1101/2023.09.20.555752v1
  40. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Complete sequencing of a cynomolgus macaque major histocompatibility complex haplotype
    1
    1. scibot 07 Sep 2023
      RRID:SCR_017759

      DOI: 10.1101/gr.277429.122

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    ncbi.nlm.nih.gov/pmc/articles/PMC10078292/
  41. Aug 2023
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Mitochondrial Genome Diversity across the Subphylum Saccharomycotina
    1
    1. scibot 26 Aug 2023
      RRID:SCR_017759

      DOI: 10.1101/2023.07.28.551029

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    ncbi.nlm.nih.gov/pmc/articles/PMC10418067/
  43. Jul 2023
  44. www.nature.com www.nature.com
    LRRC10 regulates mammalian cardiomyocyte cell cycle during heart regeneration
    1
    1. scibot 29 Jul 2023
      RRID:SCR_017759

      DOI: 10.1038/s41536-023-00316-0

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    nature.com/articles/s41536-023-00316-0
  45. link.springer.com link.springer.com
    Genomic and population characterization of a diversity panel of dwarf and tall coconut accessions from the International Coconut Genebank for Latin America and Caribbean
    1
    1. scibot 08 Jul 2023
      RRID:SCR_017759

      DOI: 10.1007/s10722-023-01652-2

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    link.springer.com/article/10.1007/s10722-023-01652-2
  46. Jun 2023
  47. www.biorxiv.org www.biorxiv.org
    Genomic and ecological factors shaping specialism and generalism across an entire subphylum
    1
    1. scibot 27 Jun 2023
      RRID:SCR_017759

      DOI: 10.1101/2023.06.19.545611

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    biorxiv.org/content/10.1101/2023.06.19.545611v1
  48. www.medrxiv.org www.medrxiv.org
    Metagenomic sequencing detects human respiratory and enteric viruses in air samples collected from congregate settings
    1
    1. scibot 08 Jun 2023
      RRID:SCR_017759

      DOI: 10.1101/2023.05.28.23290648

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    medrxiv.org/content/10.1101/2023.05.28.23290648v1
  49. May 2023
  50. www.biorxiv.org www.biorxiv.org
    Soil microaggregate bacterial communities following Amynthas tokioensis and Amynthas agrestis earthworm co-invasion
    1
    1. scibot 25 May 2023
      RRID:SCR_017759

      DOI: 10.1101/2023.05.19.541528

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    biorxiv.org/content/10.1101/2023.05.19.541528v1
  51. www.nature.com www.nature.com
    Pangenomics of the death cap mushroom Amanita phalloides, and of Agaricales, reveals dynamic evolution of toxin genes in an invasive range
    1
    1. scibot 25 May 2023
      RRID:SCR_017759

      DOI: 10.1038/s41396-023-01432-x

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    nature.com/articles/s41396-023-01432-x
  52. Apr 2023
  53. www.sciencedirect.com www.sciencedirect.com
    Glycomacropeptide impacts amylin-mediated satiety, postprandial markers of glucose homeostasis and the fecal microbiome in obese postmenopausal women
    1
    1. scibot 29 Apr 2023
      RRID:SCR_017759

      DOI: 10.1016/j.tjnut.2023.03.014

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  54. www.biorxiv.org www.biorxiv.org
    Unveiling the co-phylogeny signal between plunderfish Harpagifer spp. and their gut microbiomes across the Southern Ocean
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    1. scibot 27 Apr 2023
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      DOI: 10.1101/2023.04.18.537398

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  55. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genetic mapping and prediction of flowering time and plant height in a maize Stiff Stalk MAGIC population
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    1. scibot 27 Apr 2023
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      DOI: 10.1093/genetics/iyac063

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    ncbi.nlm.nih.gov/pmc/articles/PMC9157087/
  56. www.mdpi.com www.mdpi.com
    Uniparental Inheritance and Recombination as Strategies to Avoid Competition and Combat Muller’s Ratchet among Mitochondria in Natural Populations of the Fungus Amanita phalloides
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      RRID:SCR_017759

      DOI: 10.3390/jof9040476

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  57. Mar 2023
  58. rupress.org rupress.org
    cMyBP-C ablation in human engineered cardiac tissue causes progressive Ca2+-handling abnormalities
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      DOI: 10.1085/jgp.202213204

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    rupress.org/jgp/article/155/4/e202213204/213929/cMyBP-C-ablation-in-human-engineered-cardiac
  59. www.biorxiv.org www.biorxiv.org
    Tillage homogenizes soil bacterial communities in microaggregate fractions by facilitating dispersal
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      DOI: 10.1101/2023.03.08.531801

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  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Interaction with the carboxy-terminal tip of SSB is critical for RecG function in E. coli
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      DOI: 10.1093/nar/gkad162

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  61. www.biorxiv.org www.biorxiv.org
    CD8+ cells and small viral reservoirs facilitate post-ART control of SIV in Mauritian cynomolgus macaques
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      DOI: 10.1101/2023.03.01.530655

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  62. Feb 2023
  63. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Modulation of Schwann cell homeostasis by the BAP1 deubiquitinase
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    1. scibot 23 Feb 2023
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      DOI: 10.1002/glia.24351

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    onlinelibrary.wiley.com/doi/10.1002/glia.24351
  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A role for ion homeostasis in yeast ionic liquid tolerance
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    1. scibot 23 Feb 2023
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      DOI: 10.17912/micropub.biology.000718

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  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Rhinovirus increases Moraxella catarrhalis adhesion to the respiratory epithelium
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      DOI: 10.3389/fcimb.2022.1060748

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  66. Jan 2023
  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Voltage-gated sodium channel scn8a is required for innervation and regeneration of amputated adult zebrafish fins
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      DOI: 10.1073/pnas.2200342119

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  68. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Stress Keratin 17 expression in head and neck cancer contributes to immune evasion and resistance to immune checkpoint blockade
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      DOI: 10.1158/1078-0432.CCR-21-3039

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  69. Nov 2022
  70. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    IL-10 and TGF-β cytokines decrease immune activation during normothermic ex vivo machine perfusion of the rat liver
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      DOI: 10.1002/lt.26206

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  71. Oct 2022
  72. www.sciencedirect.com www.sciencedirect.com
    Rapid genomic changes by mineralotropic hormones and kinase SIK inhibition drive coordinated renal Cyp27b1 and Cyp24a1 expression via CREB modules
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      DOI: 10.1016/j.jbc.2022.102559

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    sciencedirect.com/science/article/pii/S0021925822010031
  73. Sep 2022
  74. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative chemical genomic profiling across plant-based hydrolysate toxins reveals widespread antagonism in fitness contributions
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      DOI: 10.1093/femsyr/foac036

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  75. Aug 2022
  76. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Association of CARD14 Single-Nucleotide Polymorphisms with Psoriasis
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      DOI: 10.3390/ijms23169336

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  77. Jul 2022
  78. link.springer.com link.springer.com
    S097: a single, peri-operative antibiotic can persistently alter the post-operative gut microbiome after Roux-en-Y gastric bypass
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      DOI: 10.1007/s00464-022-09387-4

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  79. Jun 2022
  80. www.sciencedirect.com www.sciencedirect.com
    Altered patterning of trisomy 21 interneuron progenitors
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      DOI: 10.1016/j.stemcr.2022.05.001

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    sciencedirect.com/science/article/pii/S2213671122002090
  81. May 2022
  82. www.sciencedirect.com www.sciencedirect.com
    Rapid diversification of the Variable Seedeater superspecies complex despite widespread gene flow
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      RRID:SCR_017759

      DOI: 10.1016/j.ympev.2022.107510

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    sciencedirect.com/science/article/pii/S1055790322001233
  83. Mar 2022
  84. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Single-cell RNA sequencing distinguishes dendritic cell subsets in the rat, allowing advanced characterization of the effects of FMS-like tyrosine kinase 3 ligand
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      DOI: 10.1111/sji.13159

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    onlinelibrary.wiley.com/doi/10.1111/sji.13159
  85. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Dual Transcriptomics To Determine Gamma Interferon-Independent Host Response to Intestinal Cryptosporidium parvum Infection
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      RRID:SCR_017759

      DOI: 10.1128/iai.00638-21

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    ncbi.nlm.nih.gov/pmc/articles/PMC8852703/
  86. journals.asm.org journals.asm.org
    Dual transcriptomics to determine interferon-gamma independent host response to intestinal Cryptosporidium parvum infection
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      RRID:SCR_017759

      DOI: 10.1128/iai.00638-21

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    journals.asm.org/doi/abs/10.1128/iai.00638-21
  87. Oct 2021
  88. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Assessment of Mosaicism and Detection of Cryptic Alleles in CRISPR/Cas9-Engineered Neurofibromatosis Type 1 and TP53 Mutant Porcine Models Reveals Overlooked Challenges in Precision Modeling of Human Diseases
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    1. scibot 09 Oct 2021
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      DOI: 10.3389/fgene.2021.721045

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    ncbi.nlm.nih.gov/pmc/articles/PMC8495252/
  89. www.sciencedirect.com www.sciencedirect.com
    Crabtree/Warburg-like aerobic xylose fermentation by engineered Saccharomyces cerevisiae
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      DOI: 10.1016/j.ymben.2021.09.008

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    sciencedirect.com/science/article/pii/S1096717621001488
  90. Aug 2021
  91. www.mdpi.com www.mdpi.com
    TCF19 Impacts a Network of Inflammatory and DNA Damage Response Genes in the Pancreatic β-Cell
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      RRID:SCR_017759

      DOI: 10.3390/metabo11080513

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    mdpi.com/2218-1989/11/8/513