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44 Matching Annotations

Feb 2026
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia

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1. scibot 04 Feb 2026
  
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  DOI: 10.1158/2159-8290.CD-25-0556
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12861042/
Jan 2026
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Spatial transcriptomics reveals altered communities and drivers of aberrant epithelia and pro-fibrotic fibroblasts in interstitial lung diseases

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1. scibot 23 Jan 2026
  
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  DOI: 10.1016/j.xgen.2025.101066
  
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sciencedirect.com/science/article/pii/S2666979X25003222
Nov 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

White and brown adipose tissue share a convergent fibro-adipogenic progenitor population

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1. scibot 26 Nov 2025
  
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  DOI: 10.1038/s44319-025-00591-6
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12635263/
Oct 2025
54.241.53.176 54.241.53.176

1-s2.0-S258900422502053X-main-html.html

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1. scibot 18 Oct 2025
  
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54.241.53.176/90c51c90613310994f9d7257cbe7ee563ff19804/1-s2.0-S258900422502053X-main-html.html
54.241.53.176 54.241.53.176

2025.09.26.678859v1.full-html.html

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1. scibot 04 Oct 2025
  
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  DOI: 10.1101/2025.09.26.678859
  
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54.241.53.176/6799670a7f30b57e9f6325ef120ecd132ee74343/2025.09.26.678859v1.full-html.html
Aug 2025
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Gut commensal microbiota drive tailored macrophage responses

1
1. scibot 19 Aug 2025
  
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  DOI: 10.1016/j.celrep.2025.116157
  
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sciencedirect.com/science/article/pii/S2211124725009283
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Depletion of Effector Regulatory T Cells Associates with Major Response to Induction Dual Immune Checkpoint Blockade

1
1. scibot 06 Aug 2025
  
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  DOI: 10.1158/2159-8290.CD-24-1390
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12319410/
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Characteristics of a CCL21 gene-modified dendritic cell vaccine utilized for a clinical trial in non-small cell lung cancer

1
1. scibot 05 Aug 2025
  
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  DOI: 10.1158/1535-7163.MCT-24-0435
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11813162/
Jul 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

SeuratExtend: streamlining single-cell RNA-seq analysis through an integrated and intuitive framework

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1. scibot 10 Jul 2025
  
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  DOI: 10.1093/gigascience/giaf076
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12236070/
Jun 2025
rupress.org rupress.org

Gut dysbiosis from high-salt diet promotes glioma via propionate-mediated TGF-β activation

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1. scibot 25 Jun 2025
  
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  DOI: 10.1084/jem.20241135
  
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rupress.org/jem/article/222/8/e20241135/277968/Gut-dysbiosis-from-high-salt-diet-promotes-glioma
Apr 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Ontogeny Dictates Oncogenic Potential, Lineage Hierarchy, and Therapy Response in Pediatric Leukemia

1
1. scibot 18 Apr 2025
  
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  DOI: 10.1101/2025.03.19.643917
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11957141/
Mar 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

Comparative Single-Cell Transcriptomics of Human Neuroblastoma and Preclinical Models Reveals Conservation of an Adrenergic Cell State

1
1. scibot 20 Mar 2025
  
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  DOI: 10.1158/0008-5472.CAN-24-1507
  
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pmc.ncbi.nlm.nih.gov/articles/PMC11907193/
Feb 2025
www.sciencedirect.com www.sciencedirect.com

The endogenous antigen-specific CD8+ T cell repertoire is composed of unbiased and biased clonotypes with differential fate commitments

1
1. scibot 28 Feb 2025
  
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  DOI: 10.1016/j.immuni.2025.02.001
  
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sciencedirect.com/science/article/pii/S1074761325000688
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Individualized patient tumor organoids faithfully preserve human brain tumor ecosystems and predict patient response to therapy

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1. scibot 13 Feb 2025
  
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  DOI: 10.1016/j.stem.2025.01.002
  
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sciencedirect.com/science/article/pii/S1934590925000025
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Myofibroblasts emerge during alveolar regeneration following influenza-virus-induced lung injury

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1. scibot 04 Feb 2025
  
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  DOI: 10.1016/j.celrep.2025.115248
  
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sciencedirect.com/science/article/pii/S2211124725000191
Jun 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Uncovering strain- and age-dependent innate immune responses to SARS-CoV-2 infection in air-liquid-interface cultured nasal epithelia

1
1. scibot 14 Jun 2024
  
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  DOI: 10.1016/j.isci.2024.110009
  
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ncbi.nlm.nih.gov/pmc/articles/PMC11166695/
Apr 2024
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Generation of human cerebral organoids with a structured outer subventricular zone

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1. scibot 09 Apr 2024
  
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  RRID:SCR_018168
  
  DOI: 10.1016/j.celrep.2024.114031
  
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sciencedirect.com/science/article/pii/S2211124724003590
Mar 2024
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Villus myofibroblasts are developmental and adult progenitors of mammalian gut lymphatic musculature

2
1. scibot 28 Mar 2024
  
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  RRID:SCR_018168
  
  DOI: 10.1016/j.devcel.2024.03.005
  
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2. scibot 28 Mar 2024
  
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  RRID:SCR_018168
  
  DOI: 10.1016/j.devcel.2024.03.005
  
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sciencedirect.com/science/article/pii/S1534580724001461
Feb 2024
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An iron rheostat controls hematopoietic stem cell fate

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1. scibot 23 Feb 2024
  
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  DOI: 10.1016/j.stem.2024.01.011
  
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sciencedirect.com/science/article/pii/S1934590924000419
www.biorxiv.org www.biorxiv.org

A Mutation-driven oncofetal regression fuels phenotypic plasticity in colorectal cancer

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1. scibot 09 Feb 2024
  
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  DOI: 10.1101/2023.12.10.570854
  
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biorxiv.org/content/10.1101/2023.12.10.570854v1
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A clinically applicable connectivity signature for glioblastoma includes the tumor network driver CHI3L1

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1. scibot 08 Feb 2024
  
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  DOI: 10.1038/s41467-024-45067-8
  
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nature.com/articles/s41467-024-45067-8
Jan 2024
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Establishing a 3D culture system for early organogenesis of monkey embryos ex vivo and single-cell transcriptome analysis of cultured embryos

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1. scibot 20 Jan 2024
  
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  DOI: 10.1016/j.xpro.2023.102835
  
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sciencedirect.com/science/article/pii/S266616672300802X
www.sciencedirect.com:5037 www.sciencedirect.com:5037

An exhausted-like microglial population accumulates in aged and APOE4 genotype Alzheimer’s brains

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1. scibot 06 Jan 2024
  
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  DOI: 10.1016/j.immuni.2023.12.001
  
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sciencedirect.com:5037/science/article/pii/S1074761323005320
Dec 2023
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Multipotent progenitors instruct ontogeny of the superior colliculus

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1. scibot 16 Dec 2023
  
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  DOI: 10.1016/j.neuron.2023.11.009
  
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sciencedirect.com/science/article/pii/S0896627323008838
Nov 2023
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Structured wound angiogenesis instructs mesenchymal barrier compartments in the regenerating nerve

1
1. scibot 18 Nov 2023
  
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  DOI: 10.1016/j.neuron.2023.10.025
  
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sciencedirect.com/science/article/pii/S0896627323008061
Oct 2023
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Alpha-1 adrenergic signaling drives cardiac regeneration via extracellular matrix remodeling transcriptional program in zebrafish macrophages

1
1. scibot 28 Oct 2023
  
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  DOI: 10.1016/j.devcel.2023.09.011
  
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sciencedirect.com/science/article/pii/S1534580723005130
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Cerebral organoids derived from patients with Alzheimer’s disease with PSEN1/2 mutations have defective tissue patterning and altered development

1
1. scibot 27 Oct 2023
  
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  DOI: 10.1016/j.celrep.2023.113310
  
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sciencedirect.com/science/article/pii/S2211124723013220
Aug 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Novel human pluripotent stem cell-derived hypothalamus organoids demonstrate cellular diversity

1
1. scibot 31 Aug 2023
  
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  DOI: 10.1016/j.isci.2023.107525
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10460991/
May 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Loss of transcriptional heterogeneity in aged human muscle stem cells

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1. scibot 18 May 2023
  
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  DOI: 10.1371/journal.pone.0285018
  
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ncbi.nlm.nih.gov/pmc/articles/PMC10187936/
Nov 2022
www.nature.com www.nature.com

Protein aggregation and calcium dysregulation are hallmarks of familial Parkinson’s disease in midbrain dopaminergic neurons

1
1. scibot 29 Nov 2022
  
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  DOI: 10.1038/s41531-022-00423-7
  
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nature.com/articles/s41531-022-00423-7
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Alternative splicing downstream of EMT enhances phenotypic plasticity and malignant behavior in colon cancer

1
1. scibot 22 Nov 2022
  
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  DOI: 10.7554/eLife.82006
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9674345/
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CD8+ T cell metabolic rewiring defined by scRNA-seq identifies a critical role of ASNS expression dynamics in T cell differentiation

1
1. scibot 16 Nov 2022
  
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  DOI: 10.1016/j.celrep.2022.111639
  
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sciencedirect.com/science/article/pii/S2211124722015108
Oct 2022
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Human PSCs determine the competency of cerebral organoid differentiation via FGF signaling and epigenetic mechanisms

1
1. scibot 04 Oct 2022
  
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  DOI: 10.1016/j.isci.2022.105140
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9523398/
Jul 2022
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Molecular signatures and cellular diversity during mouse habenula development

1
1. scibot 06 Jul 2022
  
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  DOI: 10.1016/j.celrep.2022.111029
  
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sciencedirect.com/science/article/pii/S2211124722008233
Dec 2021
elifesciences.org elifesciences.org

Coronary blood vessels from distinct origins converge to equivalent states during mouse and human development

1
1. scibot 21 Dec 2021
  
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  RRID:SCR_018168
  
  DOI: 10.7554/eLife.70246
  
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elifesciences.org/articles/70246
Nov 2021
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

singlecellVR: Interactive Visualization of Single-Cell Data in Virtual Reality

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1. scibot 15 Nov 2021
  
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  RRID:SCR_018168
  
  DOI: 10.3389/fgene.2021.764170
  
  Resource: scVelo (RRID:SCR_018168)
  
  Curator: @scibot
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8582280/
Sep 2021
www.sciencedirect.com www.sciencedirect.com

Follicular dendritic cells restrict interleukin-4 availability in germinal centers and foster memory B cell generation

1
1. scibot 23 Sep 2021
  
  in Public
  
  RRID:SCR_018168
  
  DOI: 10.1016/j.immuni.2021.08.028
  
  Resource: scVelo (RRID:SCR_018168)
  
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sciencedirect.com/science/article/pii/S1074761321003629
elifesciences.org elifesciences.org

Single-cell analysis of the ventricular-subventricular zone reveals signatures of dorsal and ventral adult neurogenesis

1
1. scibot 22 Sep 2021
  
  in Public
  
  RRID:SCR_018168
  
  DOI: 10.7554/eLife.67436
  
  Resource: scVelo (RRID:SCR_018168)
  
  Curator: @scibot
  
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elifesciences.org/articles/67436
Aug 2021
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Murine muscle stem cell response to perturbations of the neuromuscular junction are attenuated with aging

1
1. scibot 19 Aug 2021
  
  in Public
  
  RRID:SCR_018168
  
  DOI: 10.7554/eLife.66749
  
  Resource: scVelo (RRID:SCR_018168)
  
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ncbi.nlm.nih.gov/pmc/articles/PMC8360658/
Jun 2021
www.sciencedirect.com www.sciencedirect.com

Single-cell BCR and transcriptome analysis after influenza infection reveals spatiotemporal dynamics of antigen-specific B cells

1
1. scibot 23 Jun 2021
  
  in Public
  
  RRID:SCR_018168
  
  DOI: 10.1016/j.celrep.2021.109286
  
  Resource: scVelo (RRID:SCR_018168)
  
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sciencedirect.com/science/article/pii/S2211124721006574
Apr 2021
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Cascade diversification directs generation of neuronal diversity in the hypothalamus

1
1. scibot 22 Apr 2021
  
  in Public
  
  RRID:SCR_018168
  
  DOI: 10.1016/j.stem.2021.03.020
  
  Resource: scVelo (RRID:SCR_018168)
  
  Curator: @Naa003
  
  SciCrunch record: RRID:SCR_018168
  
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  RRIDCUR:Validated RRID:SCR_018168
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sciencedirect.com/science/article/pii/S1934590921001533
www.nature.com www.nature.com

Single-cell atlas of early human brain development highlights heterogeneity of human neuroepithelial cells and early radial glia

1
1. scibot 17 Apr 2021
  
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  RRID:SCR_018168
  
  DOI: 10.1038/s41593-020-00794-1
  
  Resource: scVelo (RRID:SCR_018168)
  
  Curator: @evieth
  
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nature.com/articles/s41593-020-00794-1
Oct 2020
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Lef1 expression in fibroblasts maintains developmental potential in adult skin to regenerate wounds

1
1. scibot 02 Oct 2020
  
  in Public
  
  RRID:SCR_018168
  
  DOI: 10.7554/eLife.60066
  
  Resource: SCR_018168
  
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ncbi.nlm.nih.gov/pmc/articles/PMC7524549/