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  1. Last 7 days
  2. www.cell.com www.cell.com
    Single-cell spatial multiomics reveals tumor microenvironment vulnerabilities in cancer resistance to immunotherapy
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    1. scibot 23 Jul 2024
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      DOI: 10.1016/j.celrep.2024.114392

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    cell.com/cell-reports/abstract/S2211-1247(24)00720-4
  3. link.springer.com link.springer.com
    Single-cell RNA Sequencing Identifies a Novel Subtype of Microglia with High Cd74 Expression that Facilitates White Matter Inflammation During Chronic Cerebral Hypoperfusion
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    1. scibot 23 Jul 2024
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      DOI: 10.1007/s11064-024-04206-9

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    link.springer.com/article/10.1007/s11064-024-04206-9
  4. Jul 2024
  5. www.sciencedirect.com www.sciencedirect.com
    Synaptic plasticity in human thalamocortical assembloids
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    1. scibot 17 Jul 2024
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      DOI: 10.1016/j.celrep.2024.114503

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    sciencedirect.com/science/article/pii/S2211124724008325
  6. Jun 2024
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    SIMS: A deep-learning label transfer tool for single-cell RNA sequencing analysis
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    1. scibot 04 Jun 2024
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      DOI: 10.1016/j.xgen.2024.100581

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    sciencedirect.com/science/article/pii/S2666979X24001654
  8. May 2024
  9. www.sciencedirect.com www.sciencedirect.com
    An inducible genetic tool to track and manipulate specific microglial states reveals their plasticity and roles in remyelination
    1
    1. scibot 31 May 2024
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      DOI: 10.1016/j.immuni.2024.05.005

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    sciencedirect.com/science/article/pii/S1074761324002589
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    PABPC1L induces IDO1 to promote tryptophan metabolism and immune suppression in renal cell carcinoma
    1
    1. scibot 17 May 2024
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      DOI: 10.1158/0008-5472.CAN-23-2521

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    ncbi.nlm.nih.gov/pmc/articles/PMC11094425/
  11. www.sciencedirect.com www.sciencedirect.com
    Transcription factor dynamics, oscillation, and functions in human enteroendocrine cell differentiation
    1
    1. scibot 14 May 2024
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      DOI: 10.1016/j.stem.2024.04.015

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    sciencedirect.com/science/article/pii/S1934590924001425
  12. Feb 2024
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative transcriptomic analysis of bovine mesenchymal stromal cells reveals tissue-source and species-specific differences
    1
    1. scibot 08 Feb 2024
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      DOI: 10.1016/j.isci.2024.108886

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    ncbi.nlm.nih.gov/pmc/articles/PMC10838956/
  14. Jan 2024
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    β-catenin-driven differentiation is a tissue-specific epigenetic vulnerability in adrenal cancer
    1
    1. scibot 10 Jan 2024
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      DOI: 10.1158/0008-5472.CAN-22-2712

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    ncbi.nlm.nih.gov/pmc/articles/PMC10330305/
  16. Dec 2023
  17. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    scNAT: a deep learning method for integrating paired single-cell RNA and T cell receptor sequencing profiles
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    1. scibot 20 Dec 2023
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      DOI: 10.1186/s13059-023-03129-y

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    ncbi.nlm.nih.gov/pmc/articles/PMC10726524/
  18. www.sciencedirect.com www.sciencedirect.com
    Multipotent progenitors instruct ontogeny of the superior colliculus
    1
    1. scibot 16 Dec 2023
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      DOI: 10.1016/j.neuron.2023.11.009

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    sciencedirect.com/science/article/pii/S0896627323008838
  19. www.science.org www.science.org
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    1. scibot 09 Dec 2023
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      DOI: 10.1126/sciadv.adh1914

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    science.org/doi/10.1126/sciadv.adh1914
  20. Oct 2023
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A single-cell multi-omic atlas spanning the adult rhesus macaque brain
    1
    1. scibot 14 Oct 2023
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      DOI: 10.1126/sciadv.adh1914

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    ncbi.nlm.nih.gov/pmc/articles/PMC10569716/
  22. Sep 2023
  23. www.sciencedirect.com www.sciencedirect.com
    Single-cell multi-omics defines the cell-type-specific impact of splicing aberrations in human hematopoietic clonal outgrowths
    1
    1. scibot 29 Sep 2023
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      DOI: 10.1016/j.stem.2023.07.012

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    sciencedirect.com/science/article/pii/S1934590923002576
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Spatially Distinct Otic Mesenchyme Cells show Molecular and Functional Heterogeneity Patterns Before Hearing Onset
    1
    1. scibot 20 Sep 2023
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      DOI: 10.1016/j.isci.2023.107769

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    ncbi.nlm.nih.gov/pmc/articles/PMC10502415/
  25. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Activin A-mediated polarization of cancer-associated fibroblasts and macrophages confers resistance to checkpoint immunotherapy in skin cancer
    1
    1. scibot 07 Sep 2023
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      DOI: 10.1158/1078-0432.CCR-23-0219

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    ncbi.nlm.nih.gov/pmc/articles/PMC10472111/
  26. Aug 2023
  27. 52.53.155.43 52.53.155.43
    Homeostatic PD-1 signaling restrains EOMES-dependent oligoclonal expansion of liver-resident CD8 T cells
    2
    1. scibot 12 Aug 2023
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      DOI: 10.1016/j.celrep.2023.112876

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    2. scibot 10 Aug 2023
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      DOI: 10.1016/j.celrep.2023.112876

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    52.53.155.43/7d9bf3333b9425342ca4204697d643342388db9f/PIIS2211124723008872-html.html
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Comparative single-cell profiling reveals distinct cardiac resident macrophages essential for zebrafish heart regeneration
    1
    1. scibot 12 Aug 2023
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      DOI: 10.7554/eLife.84679

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    ncbi.nlm.nih.gov/pmc/articles/PMC10411971/
  29. www.sciencedirect.com www.sciencedirect.com
    Sex shapes cell-type-specific transcriptional signatures of stress exposure in the mouse hypothalamus
    1
    1. scibot 03 Aug 2023
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      DOI: 10.1016/j.celrep.2023.112874

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    sciencedirect.com/science/article/pii/S2211124723008859
  30. Jul 2023
  31. 52.53.155.43 52.53.155.43
    ccr-23-0219-html.html
    1
    1. scibot 08 Jul 2023
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      DOI: 10.1158/1078-0432.ccr-23-0219

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    52.53.155.43/655eb405a7cb4d753bf5d3b7a2b497cd2cb0bb77/ccr-23-0219-html.html
  32. Jun 2023
  33. 52.53.155.43 52.53.155.43
    can-22-2712-html.html
    1
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      DOI: 10.1158/0008-5472.can-22-2712

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    52.53.155.43/726555d37fadfa1ef429cf94df3437d3f13c8b94/can-22-2712-html.html
  34. www.embopress.org www.embopress.org
    PARK15/FBXO7 is dispensable for PINK1/Parkin mitophagy in iNeurons and HeLa cell systems
    1
    1. scibot 23 Jun 2023
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      DOI: 10.15252/embr.202256399

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    embopress.org/doi/full/10.15252/embr.202256399
  35. onlinelibrary.wiley.com onlinelibrary.wiley.com
    Single-cell RNA-seq uncovers novel metabolic functions of Schwann cells beyond myelination
    1
    1. scibot 22 Jun 2023
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      DOI: 10.1111/jnc.15877

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    onlinelibrary.wiley.com/doi/10.1111/jnc.15877
  36. www.sciencedirect.com www.sciencedirect.com
    Endothelial and Leptin Receptor+ cells promote the maintenance of stem cells and hematopoiesis in early postnatal murine bone marrow
    1
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      DOI: 10.1016/j.devcel.2023.02.003

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    sciencedirect.com/science/article/pii/S153458072300045X
  37. www.sciencedirect.com www.sciencedirect.com
    Lineage skewing and genome instability underlie marrow failure in a zebrafish model of GATA2 deficiency
    1
    1. scibot 02 Jun 2023
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      DOI: 10.1016/j.celrep.2023.112571

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    sciencedirect.com/science/article/pii/S221112472300582X
  38. May 2023
  39. faseb.onlinelibrary.wiley.com faseb.onlinelibrary.wiley.com
    Integrative transcriptomics and cell systems analyses reveal protective pathways controlled by Igfbp-3 in anthracycline-induced cardiotoxicity
    1
    1. scibot 24 May 2023
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      DOI: 10.1096/fj.202201885RR

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    faseb.onlinelibrary.wiley.com/doi/10.1096/fj.202201885RR
  40. www.sciencedirect.com www.sciencedirect.com
    Metaphocytes are IL-22BP-producing cells regulated by ETS transcription factor Spic and essential for zebrafish barrier immunity
    1
    1. scibot 11 May 2023
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      DOI: 10.1016/j.celrep.2023.112483

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    sciencedirect.com/science/article/pii/S2211124723004941
  41. www-sciencedirect-com.ezproxy.auckland.ac.nz www-sciencedirect-com.ezproxy.auckland.ac.nz
    Bovine blastocyst-like structures derived from stem cell cultures
    1
    1. scibot 05 May 2023
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      DOI: 10.1016/j.stem.2023.04.003

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    www-sciencedirect-com.ezproxy.auckland.ac.nz/science/article/pii/S1934590923001212
  42. Apr 2023
  43. www.nature.com www.nature.com
    Glucocerebrosidase is imported into mitochondria and preserves complex I integrity and energy metabolism
    1
    1. scibot 11 Apr 2023
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      DOI: 10.1038/s41467-023-37454-4

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    nature.com/articles/s41467-023-37454-4
  44. Mar 2023
  45. europepmc.org europepmc.org
    Jarid2 promotes temporal progression of retinal progenitors via repression of Foxp1
    1
    1. scibot 16 Mar 2023
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      DOI: 10.1016/j.celrep.2023.112237

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    europepmc.org/article/med/36924502
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Proliferative exhausted CD8+ T cells exacerbate long-lasting anti-tumor effects in human papillomavirus-positive head and neck squamous cell carcinoma
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    1. scibot 02 Mar 2023
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      DOI: 10.7554/eLife.82705

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    ncbi.nlm.nih.gov/pmc/articles/PMC9946444/
  47. Dec 2022
  48. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Distinct Tumor Necrosis Factor Alpha Receptors Dictate Stem Cell Fitness Versus Lineage Output in Dnmt3a-Mutant Clonal Hematopoiesis
    1
    1. scibot 16 Dec 2022
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      DOI: 10.1158/2159-8290.CD-22-0086

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    ncbi.nlm.nih.gov/pmc/articles/PMC9716249/
  49. Nov 2022
  50. www.sciencedirect.com www.sciencedirect.com
    De-erosion of X chromosome dosage compensation by the editing of XIST regulatory regions restores the differentiation potential in hPSCs
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    1. scibot 30 Nov 2022
      RRID:SCR_018685

      DOI: 10.1016/j.crmeth.2022.100352

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    sciencedirect.com/science/article/pii/S2667237522002491
  51. www.sciencedirect.com www.sciencedirect.com
    CD8+ T cell metabolic rewiring defined by scRNA-seq identifies a critical role of ASNS expression dynamics in T cell differentiation
    1
    1. scibot 16 Nov 2022
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      DOI: 10.1016/j.celrep.2022.111639

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    sciencedirect.com/science/article/pii/S2211124722015108
  52. www.sciencedirect.com www.sciencedirect.com
    Derivation of nociceptive sensory neurons from hiPSCs with early patterning and temporally controlled NEUROG2 overexpression
    1
    1. scibot 16 Nov 2022
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      DOI: 10.1016/j.crmeth.2022.100341

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    sciencedirect.com/science/article/pii/S2667237522002387
  53. Oct 2022
  54. www.sciencedirect.com www.sciencedirect.com
    Elevated pentose phosphate pathway flux supports appendage regeneration
    1
    1. scibot 26 Oct 2022
      RRID:SCR_018685

      DOI: 10.1016/j.celrep.2022.111552

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    sciencedirect.com/science/article/pii/S2211124722014085
  55. Sep 2022
  56. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAG2 promotes the myelination transcriptional program in oligodendrocytes
    1
    1. scibot 08 Sep 2022
      RRID:SCR_018685

      DOI: 10.7554/eLife.77848

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    ncbi.nlm.nih.gov/pmc/articles/PMC9439679/
  57. Aug 2022
  58. www.sciencedirect.com www.sciencedirect.com
    Identification of a drug-response gene in multiple myeloma through longitudinal single-cell transcriptome sequencing
    1
    1. scibot 10 Aug 2022
      RRID:SCR_018685

      DOI: 10.1016/j.isci.2022.104781

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    sciencedirect.com/science/article/pii/S2589004222010537
  59. www.sciencedirect.com www.sciencedirect.com
    Single-cell and spatial mapping Identify cell types and signaling Networks in the human ureter
    1
    1. scibot 02 Aug 2022
      RRID:SCR_018685

      DOI: 10.1016/j.devcel.2022.07.004

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  60. May 2022
  61. elifesciences.org elifesciences.org
    Integrative analysis of scRNA-seq and scATAC-seq revealed transit-amplifying thymic epithelial cells expressing autoimmune regulator
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    1. scibot 21 May 2022
      RRID:SCR_018685

      DOI: 10.7554/eLife.73998

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    elifesciences.org/articles/73998
  62. Mar 2022
  63. elifesciences.org elifesciences.org
    Novel insights from a multiomics dissection of the Hayflick limit
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    1. scibot 23 Mar 2022
      RRID:SCR_018685

      DOI: 10.7554/eLife.70283

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  64. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Hypertrophic chondrocytes serve as a reservoir for marrow-associated skeletal stem and progenitor cells, osteoblasts, and adipocytes during skeletal development
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    1. scibot 09 Mar 2022
      RRID:SCR_018685

      DOI: 10.7554/eLife.76932

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    ncbi.nlm.nih.gov/pmc/articles/PMC8893718/
  65. www.sciencedirect.com www.sciencedirect.com
    Cholesterol biosynthesis defines oligodendrocyte precursor heterogeneity between brain and spinal cord
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      RRID:SCR_018685

      DOI: 10.1016/j.celrep.2022.110423

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  66. Sep 2021
  67. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Loss of Mir146b with aging contributes to inflammation and mitochondrial dysfunction in thioglycollate-elicited peritoneal macrophages
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    1. scibot 11 Sep 2021
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      DOI: 10.7554/eLife.66703

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    ncbi.nlm.nih.gov/pmc/articles/PMC8412946/
  68. Aug 2021
  69. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Ferroptotic stress promotes the accumulation of pro-inflammatory proximal tubular cells in maladaptive renal repair
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    1. scibot 07 Aug 2021
      RRID:SCR_018685

      DOI: 10.7554/eLife.68603

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  70. Jun 2021
  71. www.sciencedirect.com www.sciencedirect.com
    Single-cell lineage tracing of metastatic cancer reveals selection of hybrid EMT states
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    1. scibot 11 Jun 2021
      RRID:SCR_018685

      DOI: 10.1016/j.ccell.2021.05.005

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  72. May 2021
  73. www.sciencedirect.com www.sciencedirect.com
    A phenotypically supervised single-cell analysis protocol to study within-cell-type heterogeneity of cultured mammalian cells
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      SCR_018685

      DOI: 10.1016/j.xpro.2021.100561

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  74. academic.oup.com academic.oup.com
    Dynamic profiles and transcriptional preferences of histone modifications during spermiogenesis
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      RRID:SCR_018685

      DOI: 10.1210/endocr/bqaa210

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    academic.oup.com/endo/article/162/1/bqaa210/5974117
  75. Apr 2021
  76. www.sciencedirect.com www.sciencedirect.com
    Cascade diversification directs generation of neuronal diversity in the hypothalamus
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      DOI: 10.1016/j.stem.2021.03.020

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  77. Mar 2021
  78. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Global analysis of shared T cell specificities in human non-small cell lung cancer enables HLA inference and antigen discovery
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    1. scibot 21 Mar 2021
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      DOI: 10.1016/j.immuni.2021.02.014

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    ncbi.nlm.nih.gov/pmc/articles/PMC7960510/
  79. Jan 2021
  80. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Runx2-Twist1 interaction coordinates cranial neural crest guidance of soft palate myogenesis
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      RRID:SCR_018685

      DOI: 10.7554/eLife.62387

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  81. Dec 2020
  82. www.sciencedirect.com www.sciencedirect.com
    Excessive E2F Transcription in Single Cancer Cells Precludes Transient Cell-Cycle Exit after DNA Damage
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      DOI: 10.1016/j.celrep.2020.108449

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    sciencedirect.com/science/article/pii/S2211124720314388
  83. Oct 2020
  84. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Lysosomal protein surface expression discriminates fat- from bone-forming human mesenchymal precursor cells
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      DOI: 10.7554/eLife.58990

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