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13 Matching Annotations

Aug 2025
pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov

A holistic genome dataset of bacteria and archaea of mangrove sediments

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1. scibot 14 Aug 2025
  
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  RRID:SCR_019134
  
  DOI: 10.1093/gigascience/giaf081
  
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pmc.ncbi.nlm.nih.gov/articles/PMC12343073/
Feb 2025
www.sciencedirect.com www.sciencedirect.com

Pre-exposure to stress reduces loss of community and genetic diversity following severe environmental disturbance

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1. scibot 11 Feb 2025
  
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  RRID:SCR_019134
  
  DOI: 10.1016/j.cub.2025.01.037
  
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sciencedirect.com/science/article/pii/S0960982225000673
Dec 2024
www.sciencedirect.com www.sciencedirect.com

Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems

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1. scibot 02 Dec 2024
  
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  RRID:SCR_019134
  
  DOI: 10.1016/j.cell.2024.10.049
  
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sciencedirect.com/science/article/pii/S0092867424012728
Jul 2024
www.cell.com www.cell.com

Maternal gestational diabetes mellitus associates with altered gut microbiome composition and head circumference abnormalities in male offspring

1
1. scibot 16 Jul 2024
  
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  RRID:SCR_019134
  
  DOI: 10.1016/j.chom.2024.06.005
  
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cell.com/cell-host-microbe/abstract/S1931-3128(24)00223-3
Jun 2024
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

LRTK: a platform agnostic toolkit for linked-read analysis of both human genome and metagenome

1
1. scibot 22 Jun 2024
  
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  RRID:SCR_019
  
  DOI: 10.1093/gigascience/giae028
  
  Resource: MetaBAT (RRID:SCR_019134)
  
  Curator: @evieth
  
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  RRIDCUR:Unresolved DOI:10.1093/gigascience/giae028 RRID:SCR_019134
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ncbi.nlm.nih.gov/pmc/articles/PMC11170215/
May 2024
52.53.155.43 52.53.155.43

Evolutionary genomics of the emergence of brown algae as key components of coastal ecosystems

1
1. scibot 10 May 2024
  
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  RRID:SCR_019134
  
  DOI: 10.1101/2024.02.19.579948
  
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52.53.155.43/cd1f9c7be80d56e211920ba04afd056c82fa391f/2024.02.19.579948.full-html.html
Aug 2023
52.53.155.43 52.53.155.43

SnakeMAGs: a simple, efficient, flexible and scalable workflow to reconstruct prokaryotic genomes from metagenomes

1
1. scibot 12 Aug 2023
  
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  SCR_019134
  
  DOI: 10.12688/f1000research.128091.1
  
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52.53.155.43/fa09bfb21d5dc9f1bb74c50683a5c7a2d8f74864/c9952df4-51f9-40f3-b822-30ae2a3528b7_128091_-_vincent_herve-html.html
Apr 2023
www.sciencedirect.com www.sciencedirect.com

Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population

1
1. scibot 29 Apr 2023
  
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  RRID:SCR_019134
  
  DOI: 10.1016/j.cub.2023.04.011
  
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sciencedirect.com/science/article/pii/S0960982223004591
academic.oup.com academic.oup.com

GEN-ERA toolbox: unified and reproducible workflows for research in microbial genomics

1
1. scibot 11 Apr 2023
  
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  RRID:SCR_019134
  
  DOI: 10.1093/gigascience/giad022
  
  Resource: MetaBAT (RRID:SCR_019134)
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giad022/7111624
Mar 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

SnakeMAGs: a simple, efficient, flexible and scalable workflow to reconstruct prokaryotic genomes from metagenomes

1
1. scibot 04 Mar 2023
  
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  RRID:SCR_019134
  
  DOI: 10.12688/f1000research.128091.2
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9978240/
Jan 2023
www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov

Genomic view of the diversity and functional role of archaea and bacteria in the skeleton of the reef-building corals Porites lutea and Isopora palifera

1
1. scibot 26 Jan 2023
  
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  RRID:SCR_019134
  
  DOI: 10.1093/gigascience/giac127
  
  Resource: MetaBAT (RRID:SCR_019134)
  
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ncbi.nlm.nih.gov/pmc/articles/PMC9868349/
Nov 2022
academic.oup.com academic.oup.com

Improved microbial genomes and gene catalog of the chicken gut from metagenomic sequencing of high-fidelity long reads

1
1. scibot 22 Nov 2022
  
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  RRID:SCR_019134
  
  DOI: 10.1093/gigascience/giac116
  
  Resource: MetaBAT (RRID:SCR_019134)
  
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academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac116/6833030
Feb 2021
academic.oup.com academic.oup.com

A microbial gene catalog of anaerobic digestion from full-scale biogas plants

1
1. scibot 03 Feb 2021
  
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  RRID:SCR_019134
  
  DOI: 10.1093/gigascience/giaa164
  
  Resource: MetaBAT (RRID:SCR_019134)
  
  Curator: @evieth
  
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  RRIDCUR:Validated RRID:SCR_019134
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RRIDCUR:Validated

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scibot

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academic.oup.com/gigascience/article/10/1/giaa164/6121636