43 Matching Annotations
  1. Nov 2024
  2. pmc.ncbi.nlm.nih.gov pmc.ncbi.nlm.nih.gov
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
    1. scibot 07 Nov 2024
      RRID:SCR_021172

      DOI: 10.1093/dnares/dsae026

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    pmc.ncbi.nlm.nih.gov/articles/PMC11489038/
  3. Sep 2024
  4. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assemblies of two littorinid marine snails indicate genetic basis of intertidal adaptation and ancient karyotype evolved from bilaterian ancestors
    1
    1. scibot 27 Sep 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae072

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    ncbi.nlm.nih.gov/pmc/articles/PMC11423352/
  5. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Disentangling river and swamp buffalo genetic diversity: initial insights from the 1000 Buffalo Genomes Project
    1
    1. scibot 12 Sep 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae053

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    ncbi.nlm.nih.gov/pmc/articles/PMC11382405/
  6. Aug 2024
  7. www.sciencedirect.com www.sciencedirect.com
    Members of an array of zinc-finger proteins specify distinct Hox chromatin boundaries
    1
    1. scibot 23 Aug 2024
      RRID:SCR_021172

      DOI: 10.1016/j.molcel.2024.08.007

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    sciencedirect.com/science/article/pii/S1097276524006610
  8. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A trade-off in evolution: the adaptive landscape of spiders without venom glands
    1
    1. scibot 19 Aug 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae048

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    ncbi.nlm.nih.gov/pmc/articles/PMC11299198/
  9. Jul 2024
  10. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Gapless genome assembly and epigenetic profiles reveal gene regulation of whole-genome triplication in lettuce
    1
    1. scibot 14 Jul 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae043

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    ncbi.nlm.nih.gov/pmc/articles/PMC11238431/
  11. Jun 2024
  12. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Exploring the role of polymorphic interspecies structural variants in reproductive isolation and adaptive divergence in Eucalyptus
    1
    1. scibot 22 Jun 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae029

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170218/
  13. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The genomes of Dahlia pinnata, Cosmos bipinnatus, and Bidens alba in tribe Coreopsideae provide insights into polyploid evolution and inulin biosynthesis
    1
    1. scibot 22 Jun 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae032

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    ncbi.nlm.nih.gov/pmc/articles/PMC11170221/
  14. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The telomere-to-telomere (T2T) genome of Peucedanum praeruptorum Dunn provides insights into the genome evolution and coumarin biosynthesis
    1
    1. scibot 08 Jun 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae025

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152176/
  15. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
    1. scibot 08 Jun 2024
      RRID:SCR_021172

      DOI: 10.1093/g3journal/jkae021

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    ncbi.nlm.nih.gov/pmc/articles/PMC11152071/
  16. May 2024
  17. www.sciencedirect.com www.sciencedirect.com
    Heterochromatic 3D genome organization is directed by HP1a- and H3K9-dependent and independent mechanisms
    1
    1. scibot 30 May 2024
      RRID:SCR_021172

      DOI: 10.1016/j.molcel.2024.05.002

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      RRID:SCR_021172 DOI:10.1016/j.molcel.2024.05.002
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    sciencedirect.com/science/article/pii/S1097276524003952
  18. www.biorxiv.org www.biorxiv.org
    A first look at the genome structure of hexaploid ‘Black Mitcham’ peppermint (Mentha piperita L.)
    2
    1. scibot 29 May 2024
      RRID:SCR_021172

      DOI: 10.1101/2024.03.15.585188

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    2. scibot 29 May 2024
      RRID:SCR_021172

      DOI: 10.1101/2024.03.15.585188

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    biorxiv.org/content/10.1101/2024.03.15.585188v1
  19. www.biorxiv.org www.biorxiv.org
    Advancing apple genetics research: Malus coronaria and Malus ioensis genomes and a gene family-based pangenome of native North American apples
    1
    1. scibot 23 May 2024
      RRID:SCR_021172

      DOI: 10.1101/2024.05.13.593769

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    biorxiv.org/content/10.1101/2024.05.13.593769v1
  20. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosomal-level genome assembly of the long-spined sea urchin Diadema setosum (Leske, 1778)
    1
    1. scibot 08 May 2024
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.121

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    ncbi.nlm.nih.gov/pmc/articles/PMC11066563/
  21. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the common chiton, Liolophura japonica (Lischke, 1873)
    1
    1. scibot 08 May 2024
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.123

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    ncbi.nlm.nih.gov/pmc/articles/PMC11068029/
  22. Mar 2024
  23. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    An improved chromosome-level genome assembly of perennial ryegrass (Lolium perenne L.)
    1
    1. scibot 19 Mar 2024
      SCR_021172

      DOI: 10.46471/gigabyte.112

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    ncbi.nlm.nih.gov/pmc/articles/PMC10940895/
  24. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome of the poultry shaft louse Menopon gallinae provides insight into the host-switching and adaptive evolution of parasitic lice
    1
    1. scibot 03 Mar 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giae004

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    ncbi.nlm.nih.gov/pmc/articles/PMC10904027/
  25. Jan 2024
  26. dx.doi.org dx.doi.org
    The chromosome-scale genome of Magnolia sinica (Magnoliaceae) provides insights into the conservation of plant species with extremely small populations (PSESP)
    1
    1. scibot 18 Jan 2024
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giad110

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    dx.doi.org/10.1093/gigascience/giad110
  27. Dec 2023
  28. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of the Pacific geoduck Panopea generosa reveals major inter- and intrachromosomal rearrangements and substantial expansion of the copine gene family
    1
    1. scibot 21 Dec 2023
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giad105

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    ncbi.nlm.nih.gov/pmc/articles/PMC10729735/
  29. Nov 2023
  30. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A reference assembly for the legume cover crop hairy vetch (Vicia villosa)
    1
    1. scibot 26 Nov 2023
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.98

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    ncbi.nlm.nih.gov/pmc/articles/PMC10659084/
  31. Oct 2023
  32. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    The chromosome-level genome of Chinese praying mantis Tenodera sinensis (Mantodea: Mantidae) reveals its biology as a predator
    1
    1. scibot 28 Oct 2023
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giad090

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    ncbi.nlm.nih.gov/pmc/articles/PMC10600911/
  33. Sep 2023
  34. www.biorxiv.org www.biorxiv.org
    A haplotype-resolved chromosome-level assembly and annotation of European hazelnut (C. avellana cv. Jefferson) provides insight into mechanisms of eastern filbert blight resistance
    1
    1. scibot 30 Sep 2023
      RRID:SCR_021172

      DOI: 10.1101/2023.09.21.558899

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    biorxiv.org/content/10.1101/2023.09.21.558899v1
  35. Jul 2023
  36. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A new haplotype-resolved turkey genome to enable turkey genetics and genomics research
    1
    1. scibot 25 Jul 2023
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giad051

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    ncbi.nlm.nih.gov/pmc/articles/PMC10360393/
  37. May 2023
  38. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Genome assembly of an Australian native grass species reveals a recent whole-genome duplication and biased gene retention of genes involved in stress response
    1
    1. scibot 16 May 2023
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giad034

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    ncbi.nlm.nih.gov/pmc/articles/PMC10176504/
  39. Apr 2023
  40. academic.oup.com academic.oup.com
    A chromosome-scale high-contiguity genome assembly of the cheetah (Acinonyx jubatus)
    1
    1. scibot 06 Apr 2023
      RRID:SCR_021172

      DOI: 10.1093/jhered/esad015

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    academic.oup.com/jhered/advance-article/doi/10.1093/jhered/esad015/7069302
  41. Mar 2023
  42. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Improvements to the Gulf pipefish Syngnathus scovelli genome
    1
    1. scibot 29 Mar 2023
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.76

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    ncbi.nlm.nih.gov/pmc/articles/PMC10038202/
  43. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    De novo chromosome-length assembly of the mule deer (Odocoileus hemionus) genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.34

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650288/
  44. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A phased, chromosome-scale genome of ‘Honeycrisp’ apple (Malus domestica)
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.69

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    ncbi.nlm.nih.gov/pmc/articles/PMC9693968/
  45. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level assembly of the common vetch (Vicia sativa) reference genome
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.38

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    ncbi.nlm.nih.gov/pmc/articles/PMC9650280/
  46. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome assembly and annotation of the maize elite breeding line Dan340
    1
    1. scibot 02 Mar 2023
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.63

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    ncbi.nlm.nih.gov/pmc/articles/PMC9694154/
  47. Feb 2023
  48. www.sciencedirect.com www.sciencedirect.com
    A chromosome-level genome assembly of Ostrea denselamellosa provides initial insights into its evolution
    1
    1. scibot 16 Feb 2023
      RRID:SCR_021172

      DOI: 10.1016/j.ygeno.2023.110582

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    sciencedirect.com/science/article/pii/S0888754323000265
  49. Jan 2023
  50. www.biorxiv.org www.biorxiv.org
    A chromosome-scale assembly for tetraploid sour cherry (Prunus cerasus L.) ‘Montmorency’ identifies three distinct ancestral Prunus genomes
    1
    1. scibot 20 Jan 2023
      RRID:SCR_021172

      DOI: 10.1101/2023.01.10.523438

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    biorxiv.org/content/10.1101/2023.01.10.523438v1
  51. Dec 2022
  52. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A Chromosome-level assembly of the Japanese eel genome, insights into gene duplication and chromosomal reorganization
    1
    1. scibot 16 Dec 2022
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giac120

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    ncbi.nlm.nih.gov/pmc/articles/PMC9730501/
  53. Nov 2022
  54. academic.oup.com academic.oup.com
    The whole-genome assembly of an endangered Salicaceae species: Chosenia arbutifolia (Pall.) A. Skv
    1
    1. scibot 17 Nov 2022
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giac109

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    academic.oup.com/gigascience/article/doi/10.1093/gigascience/giac109/6827246
  55. Sep 2022
  56. academic.oup.com academic.oup.com
    Comparative genome and evolution analyses of an endangered stony coral species Dendrophyllia cribrosa near Dokdo Islands in the East Sea
    1
    1. scibot 17 Sep 2022
      RRID:SCR_021172

      DOI: 10.1093/gbe/evac132

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    academic.oup.com/gbe/article/14/9/evac132/6677079
  57. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    STAG2 promotes the myelination transcriptional program in oligodendrocytes
    1
    1. scibot 08 Sep 2022
      RRID:SCR_021172

      DOI: 10.7554/eLife.77848

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    ncbi.nlm.nih.gov/pmc/articles/PMC9439679/
  58. Jul 2022
  59. academic.oup.com academic.oup.com
    Chromosome-Level Genome Assembly of the Butter Clam Saxidomus purpuratus
    1
    1. scibot 30 Jul 2022
      RRID:SCR_021172

      DOI: 10.1093/gbe/evac106

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    academic.oup.com/gbe/article/14/7/evac106/6650251
  60. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    A chromosome-level genome of the booklouse, Liposcelis brunnea, provides insight into louse evolution and environmental stress adaptation
    1
    1. scibot 27 Jul 2022
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giac062

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    ncbi.nlm.nih.gov/pmc/articles/PMC9295366/
  61. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-level genome assembly of Plazaster borealis sheds light on the morphogenesis of multiarmed starfish and its regenerative capacity
    1
    1. scibot 14 Jul 2022
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giac063

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    ncbi.nlm.nih.gov/pmc/articles/PMC9270726/
  62. May 2022
  63. gigabytejournal.com gigabytejournal.com
    LT1, an ONT long-read-based assembly scaffolded with Hi-C data and polished with short reads
    1
    1. scibot 10 May 2022
      RRID:SCR_021172

      DOI: 10.46471/gigabyte.51

      Resource: Juicebox (RRID:SCR_021172)

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    gigabytejournal.com/articles/51
  64. Mar 2022
  65. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    KOREF_S1: phased, parental trio-binned Korean reference genome using long reads and Hi-C sequencing methods
    1
    1. scibot 31 Mar 2022
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giac022

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    ncbi.nlm.nih.gov/pmc/articles/PMC8952264/
  66. www.ncbi.nlm.nih.gov www.ncbi.nlm.nih.gov
    Chromosome-length genome assembly and linkage map of a critically endangered Australian bird: the helmeted honeyeater
    1
    1. scibot 31 Mar 2022
      RRID:SCR_021172

      DOI: 10.1093/gigascience/giac025

      Resource: Juicebox (RRID:SCR_021172)

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    ncbi.nlm.nih.gov/pmc/articles/PMC8963300/